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scnpilot_solids1_trim150_scaffold_19_curated

Search features with annotation key words

Displaying items 1-30 of 210 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids1_trim150_scaffold_19_curated_1
Sphingobacterium sp. PM2-P1-29, Sphingobacterium, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

3..575
DNA (573bp) protein (191aa)
Prtrc system protein e n=1 Tax=Flavobacterium sp. F52 RepID=J1KVW9_9FLAO
Uncharacterized protein {ECO:0000313|EMBL:CDS91605.1}; TaxID=403776 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sphingobacterium.;" source="Sphingobacterium sp. PM2-P1-29.;"
prtrc system protein e
scnpilot_solids1_trim150_scaffold_19_curated_2
Chryseobacterium gleum, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

594..812
DNA (219bp) protein (73aa)
PRTRC system protein C n=1 Tax=Chryseobacterium gleum ATCC 35910 RepID=D7W5D6_9FLAO
PRTRC system protein C {ECO:0000313|EMBL:EFK33158.1}; TaxID=525257 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium gleum ATCC 35910.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_19_curated_3
Chryseobacterium indologenes, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

926..1948
DNA (1023bp) protein (341aa)
Uncharacterized protein n=1 Tax=Sphingobacterium spiritivorum ATCC 33300 RepID=C2G273_9SPHI
Uncharacterized protein {ECO:0000313|EMBL:GAE65897.1}; TaxID=1218103 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium indologenes NBRC 14944.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_19_curated_4
Sphingobacterium spiritivorum, Sphingobacterium, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

1994..2710
DNA (717bp) protein (239aa)
PRTRC system protein B n=1 Tax=Sphingobacterium spiritivorum ATCC 33861 RepID=D7VNK0_9SPHI
PRTRC system protein B {ECO:0000313|EMBL:EFK57497.1}; TaxID=525373 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sphingobacterium.;" source="Sphingobacterium spiritivorum ATCC 33861.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_19_curated_5
Sphingobacterium sp. ML3W, Sphingobacterium, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

2707..3489
DNA (783bp) protein (261aa)
PRTRC system ThiF family protein n=1 Tax=Sphingobacterium spiritivorum ATCC 33300 RepID=C2FS05_9SPHI
Thiamine biosynthesis protein ThiF {ECO:0000313|EMBL:AIM38412.1}; TaxID=1538644 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sphingobacterium.;" source="Sphingobacterium sp. ML3W.;"
uba/thif-type nad/fad binding protein
scnpilot_solids1_trim150_scaffold_19_curated_6
RIFOXYC2_FULL_Ignavibacteria_38_25_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

3801..4937
DNA (1137bp) protein (379aa)
Fic family protein id=4824000 bin=GWC2_Ignavibacteria_38_9 species=RAAC39 genus=RAAC39 taxon_order=RAAC39 taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWC2_Ignavibacteria_38_9 organism_group=Ignavibacteria
filamentation induced by cAMP protein fic
Tax=RIFOXYC2_FULL_Ignavibacteria_38_25_curated
scnpilot_solids1_trim150_scaffold_19_curated_7
Flavobacterium psychrophilum, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

4947..6959
DNA (2013bp) protein (671aa)
Uncharacterized protein containing piwi/argonaute domain n=1 Tax=Belliella baltica (strain DSM 15883 / CIP 108006 / LMG 21964 / BA134) RepID=I3Z7Z0_BELBD
Uncharacterized protein {ECO:0000313|EMBL:AKC16514.1}; TaxID=96345 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium psychrophilum.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_19_curated_8
Candidatus Kuenenia stuttgartiensis, Candidatus Kuenenia, Candidatus Brocadiales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

6956..8164
DNA (1209bp) protein (403aa)
Putative uncharacterized protein n=1 Tax=Candidatus Kuenenia stuttgartiensis RepID=Q1PV31_9BACT
Putative uncharacterized protein {ECO:0000313|EMBL:CAJ71080.1}; TaxID=174633 species="Bacteria; Planctomycetes; Planctomycetia; Candidatus Brocadiales; Candidatus Brocadiaceae; Candidatus Kuenenia.;" source="Candidatus Kuenenia stuttgartiensis.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_19_curated_9
Flavobacterium hydatis, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

8174..8386
DNA (213bp) protein (71aa)
Uncharacterized protein n=1 Tax=Pedobacter sp. BAL39 RepID=A6EBD3_9SPHI
Uncharacterized protein {ECO:0000313|EMBL:KFF16521.1}; TaxID=991 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium hydatis (Cytophaga aquatilis).;"
scnpilot_solids1_trim150_scaffold_19_curated_10
Flavihumibacter sp. ZG627, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(8317..8814)
DNA (498bp) protein (166aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI0003682027
Conjugal transfer protein TraI {ECO:0000313|EMBL:KIC89825.1}; TaxID=1463156 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter sp. ZG627.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_19_curated_11
Flavihumibacter solisilvae, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(9155..12376)
DNA (3222bp) protein (1074aa)
DNA-directed DNA polymerase {ECO:0000256|SAAS:SAAS00057170}; EC=2.7.7.7 {ECO:0000256|SAAS:SAAS00057170};; TaxID=1349421 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter solisilvae.;"
DNA polymerase III subunit alpha; K14162 error-prone DNA polymerase [EC:2.7.7.7]
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI000366014B
scnpilot_solids1_trim150_scaffold_19_curated_12
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(12386..13888)
DNA (1503bp) protein (501aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI00038044D4
DNA repair nucleotidyltransferase/DNA polymerase; K14161 protein ImuB
Nucleotidyltransferase/DNA polymerase involved in DNA repair {ECO:0000313|EMBL:ACU60848.1}; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM; 2034).;"
scnpilot_solids1_trim150_scaffold_19_curated_13
Sphingobacterium sp. 21, Sphingobacterium, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(13890..14621)
DNA (732bp) protein (244aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI000369FD0B
hypothetical protein; K14160 protein ImuA
Uncharacterized protein {ECO:0000313|EMBL:ADZ79787.1}; TaxID=743722 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sphingobacterium.;" source="Sphingobacterium sp. (strain 21).;"
scnpilot_solids1_trim150_scaffold_19_curated_14
Pedobacter glucosidilyticus, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(14969..16045)
DNA (1077bp) protein (359aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI0003705067
Oxidoreductase family, NAD-binding Rossmann fold {ECO:0000313|EMBL:KHJ36739.1}; TaxID=1122941 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter glucosidilyticus.;"
oxidoreductase domain-containing protein
scnpilot_solids1_trim150_scaffold_19_curated_15
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(16252..17031)
DNA (780bp) protein (260aa)
endo-1,4-beta-xylanase n=1 Tax=Cytophagales str. B6 RepID=UPI0003B6238A
esterase
Esterase {ECO:0000313|EMBL:ADQ79052.1}; Flags: Precursor;; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Paludibacter.;" source="Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4).;"
scnpilot_solids1_trim150_scaffold_19_curated_16
Pseudomonas sp. GM67, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17147..18166)
DNA (1020bp) protein (340aa)
Lysophospholipase L1-like esterase n=1 Tax=Pseudomonas sp. GM67 RepID=J2UWA0_9PSED
Lysophospholipase L1-like esterase {ECO:0000313|EMBL:EJM91499.1}; TaxID=1144335 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. GM67.;"
scnpilot_solids1_trim150_scaffold_19_curated_17
Pedobacter heparinus, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(18336..19865)
DNA (1530bp) protein (510aa)
Putative uncharacterized protein n=1 Tax=Pedobacter heparinus (strain ATCC 13125 / DSM 2366 / NCIB 9290) RepID=C6XZ78_PEDHD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACU02560.1}; TaxID=485917 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter heparinus (strain ATCC 13125 / DSM 2366 / NCIB 9290).;"
scnpilot_solids1_trim150_scaffold_19_curated_18
Pedobacter heparinus, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(19877..20971)
DNA (1095bp) protein (365aa)
Blue (Type 1) copper domain protein n=1 Tax=Pedobacter heparinus (strain ATCC 13125 / DSM 2366 / NCIB 9290) RepID=C6XZ77_PEDHD
blue (type 1) copper domain-containing protein
Blue (Type 1) copper domain protein {ECO:0000313|EMBL:ACU02559.1}; TaxID=485917 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter heparinus (strain ATCC 13125 / DSM 2366 / NCIB 9290).;"
scnpilot_solids1_trim150_scaffold_19_curated_19
GWA2_Bacteroidetes_40_15_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(21131..22498)
DNA (1368bp) protein (456aa)
L-alanine-DL-glutamate epimerase-like protein id=3603652 bin=GWC2_Bacteroidetes_40_22 species=Dyadobacter fermentans genus=Dyadobacter taxon_order=Cytophagales taxon_class=Cytophagia phylum=Bacteroidetes tax=GWC2_Bacteroidetes_40_22 organism_group=Bacteroidetes
hypothetical protein
Tax=GWA2_Bacteroidetes_40_15_curated
scnpilot_solids1_trim150_scaffold_19_curated_20
Pedobacter glucosidilyticus, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(22606..23649)
DNA (1044bp) protein (348aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI0003705067
Oxidoreductase family, NAD-binding Rossmann fold {ECO:0000313|EMBL:KHJ36739.1}; TaxID=1122941 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter glucosidilyticus.;"
oxidoreductase domain-containing protein
scnpilot_solids1_trim150_scaffold_19_curated_21
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(23698..25929)
DNA (2232bp) protein (744aa)
alpha-N-acetylglucosaminidase; K01205 alpha-N-acetylglucosaminidase [EC:3.2.1.50]
Alpha-N-acetylglucosaminidase {ECO:0000313|EMBL:ACU60593.1}; EC=3.2.1.50 {ECO:0000313|EMBL:ACU60593.1};; Flags: Precursor;; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM; 2034).;"
alpha-N-acetylglucosaminidase n=1 Tax=Cytophagales str. B6 RepID=UPI0003B415ED
scnpilot_solids1_trim150_scaffold_19_curated_22
Cyclobacterium marinum, Cyclobacterium, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(26165..27649)
DNA (1485bp) protein (495aa)
RagB/SusD domain-containing protein n=1 Tax=Cyclobacterium marinum (strain ATCC 25205 / DSM 745) RepID=G0J0M2_CYCMS
RagB/SusD domain-containing protein
RagB/SusD domain-containing protein {ECO:0000313|EMBL:AEL23938.1}; Flags: Precursor;; TaxID=880070 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cyclobacteriaceae; Cyclobacterium.;" source="Cyclobacterium marinum (strain ATCC 25205 / DSM 745) (Flectobacillus; marinus).;"
scnpilot_solids1_trim150_scaffold_19_curated_23
Cyclobacterium marinum, Cyclobacterium, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(27682..31089)
DNA (3408bp) protein (1136aa)
TonB-dependent receptor plug n=1 Tax=Cyclobacterium marinum (strain ATCC 25205 / DSM 745) RepID=G0J1T3_CYCMS
TonB-dependent receptor plug
TonB-dependent receptor plug {ECO:0000313|EMBL:AEL23939.1}; Flags: Precursor;; TaxID=880070 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cyclobacteriaceae; Cyclobacterium.;" source="Cyclobacterium marinum (strain ATCC 25205 / DSM 745) (Flectobacillus; marinus).;"
scnpilot_solids1_trim150_scaffold_19_curated_24
Flavihumibacter solisilvae, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(31262..32413)
DNA (1152bp) protein (384aa)
anti-FecI sigma factor FecR n=1 Tax=Cytophagales str. B6 RepID=UPI0003B73B0A
Uncharacterized protein {ECO:0000313|EMBL:KIC95455.1}; TaxID=1349421 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter solisilvae.;"
anti-FecI sigma factor FecR
scnpilot_solids1_trim150_scaffold_19_curated_25
Pedobacter heparinus, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

32586..33155
DNA (570bp) protein (190aa)
RNA polymerase sigma-70 factor n=1 Tax=Pedobacter heparinus (strain ATCC 13125 / DSM 2366 / NCIB 9290) RepID=C6Y2W3_PEDHD
RNA polymerase sigma-70 factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily
RNA polymerase sigma-70 factor {ECO:0000313|EMBL:ACU03176.1}; TaxID=485917 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter heparinus (strain ATCC 13125 / DSM 2366 / NCIB 9290).;"
scnpilot_solids1_trim150_scaffold_19_curated_26
unknown

Not on your lists

33242..33376
DNA (135bp) protein (45aa)
hypothetical protein, partial n=3 Tax=Niabella aurantiaca RepID=UPI000382644A
scnpilot_solids1_trim150_scaffold_19_curated_27
Osedax symbiont Rs2, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

34086..34211
DNA (126bp) protein (42aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI0003617843
Ketose-bisphosphate aldolase {ECO:0000313|EMBL:EPJ42966.1}; TaxID=1330035 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; unclassified Oceanospirillaceae.;" source="Osedax symbiont Rs2.;"
ketose-bisphosphate aldolase
scnpilot_solids1_trim150_scaffold_19_curated_28
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(35138..36112)
DNA (975bp) protein (325aa)
Cytochrome c-related protein n=1 Tax=Niabella soli DSM 19437 RepID=H1NS62_9SPHI
Cytochrome C {ECO:0000313|EMBL:AHF16042.1}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
cytochrome c-like protein
scnpilot_solids1_trim150_scaffold_19_curated_29
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

36384..36788
DNA (405bp) protein (135aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI0003657DFA
hypothetical protein; K02197 cytochrome c-type biogenesis protein CcmE
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
scnpilot_solids1_trim150_scaffold_19_curated_30
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

36798..39347
DNA (2550bp) protein (850aa)
Cytochrome c assembly protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TQZ1_NIAKG
cytochrome c assembly protein; K02198 cytochrome c-type biogenesis protein CcmF
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
Displaying items 1-30 of 210 in total

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