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SCN18_26_2_15_R5_B_Alphaproteobacteria_66_27

In projects: SCN18_26_2_15_R5_B  |  scn18_genomes  |  SCN_ET-SeqDB_Dereplicated  |  SCN_92

Consensus taxonomy: Alphaproteobacteria  →  Proteobacteria  →  Bacteria

Description

SCN18_26_2_15_R5_B_metabat2_012

Displaying items 101-150 of 445 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
SCN18_26_2_15_R5_B_scaffold_306
Class: Alphaproteobacteria (62.26%)
53 47988 bp 66.72 27.95 95.41
SCN18_26_2_15_R5_B_scaffold_728
Class: Alphaproteobacteria (72%)
25 19512 bp 66.55 27.93 95.43
SCN18_26_2_15_R5_B_scaffold_1056
Class: Alphaproteobacteria (76.92%)
13 13023 bp 65.28 27.93 96.43
SCN18_26_2_15_R5_B_scaffold_817
Class: Alphaproteobacteria (80%)
20 17303 bp 67.11 27.93 91.22
SCN18_26_2_15_R5_B_scaffold_802
Order: Rhizobiales (55%)
20 17663 bp 65.53 27.89 91.84
SCN18_26_2_15_R5_B_scaffold_592
Class: Alphaproteobacteria (79.49%)
39 24108 bp 66.24 27.88 95.33
SCN18_26_2_15_R5_B_scaffold_105
Class: Alphaproteobacteria (71.85%)
135 140439 bp 66.25 27.88 95.20
SCN18_26_2_15_R5_B_scaffold_1632
Order: Rhizobiales (50%)
10 8553 bp 63.81 27.87 94.14
SCN18_26_2_15_R5_B_scaffold_8343
Species: SCNPILOT_CONT_1000_BF_Rhizobiales_65_79 (66.67%)
3 2107 bp 60.61 27.84 80.45
SCN18_26_2_15_R5_B_scaffold_978
Class: Alphaproteobacteria (50%)
14 13980 bp 65.46 27.83 93.15
SCN18_26_2_15_R5_B_scaffold_1008
Species: Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15 (100%)
16 13623 bp 67.37 27.81 90.49
SCN18_26_2_15_R5_B_scaffold_871
Class: Alphaproteobacteria (65%)
20 15958 bp 64.88 27.81 96.22
SCN18_26_2_15_R5_B_scaffold_322
Class: Alphaproteobacteria (72.5%)
40 46077 bp 66.52 27.80 94.25
SCN18_26_2_15_R5_B_scaffold_243
Class: Alphaproteobacteria (68.42%)
57 59556 bp 66.03 27.79 90.44
SCN18_26_2_15_R5_B_scaffold_6747
Class: Alphaproteobacteria (50%)
6 2576 bp 68.40 27.78 98.76
SCN18_26_2_15_R5_B_scaffold_880
Order: Rhizobiales (78.57%)
14 15708 bp 67.54 27.76 94.38
SCN18_26_2_15_R5_B_scaffold_297
Class: Alphaproteobacteria (59.18%)
49 49948 bp 64.72 27.75 95.12
SCN18_26_2_15_R5_B_scaffold_1219
Order: Rhizobiales (60%)
10 11369 bp 65.76 27.73 88.74
SCN18_26_2_15_R5_B_scaffold_992
Class: Alphaproteobacteria (76.47%)
17 13838 bp 66.40 27.73 90.19
SCN18_26_2_15_R5_B_scaffold_496
Class: Alphaproteobacteria (68.75%)
32 29159 bp 65.09 27.71 94.88
SCN18_26_2_15_R5_B_scaffold_233
Class: Alphaproteobacteria (69.23%)
78 75716 bp 66.18 27.69 94.44
SCN18_26_2_15_R5_B_scaffold_1414
Class: Alphaproteobacteria (58.33%)
12 9733 bp 65.53 27.68 93.98
SCN18_26_2_15_R5_B_scaffold_202
Class: Alphaproteobacteria (50%)
70 73227 bp 64.32 27.65 91.52
SCN18_26_2_15_R5_B_scaffold_751
Class: Alphaproteobacteria (52.94%)
17 19008 bp 66.16 27.64 94.48
SCN18_26_2_15_R5_B_scaffold_860
Phylum: Proteobacteria (53.85%)
13 16124 bp 65.22 27.64 91.78
SCN18_26_2_15_R5_B_scaffold_5774
Class: Alphaproteobacteria (50%)
4 2964 bp 64.61 27.63 86.34
SCN18_26_2_15_R5_B_scaffold_479
Phylum: Proteobacteria (80%)
20 30611 bp 66.43 27.63 93.63
SCN18_26_2_15_R5_B_scaffold_3458
Class: Alphaproteobacteria (60%)
5 4524 bp 65.05 27.62 85.94
SCN18_26_2_15_R5_B_scaffold_447
Class: Alphaproteobacteria (51.85%)
27 32718 bp 66.12 27.60 96.59
SCN18_26_2_15_R5_B_scaffold_553
Class: Alphaproteobacteria (70.37%)
27 25817 bp 66.96 27.59 94.45
SCN18_26_2_15_R5_B_scaffold_507
Class: Alphaproteobacteria (62.07%)
29 28305 bp 65.77 27.58 92.10
SCN18_26_2_15_R5_B_scaffold_514
Class: Alphaproteobacteria (59.26%)
27 28004 bp 65.74 27.58 94.22
SCN18_26_2_15_R5_B_scaffold_299
Class: Alphaproteobacteria (66.67%)
45 49693 bp 66.08 27.56 94.35
SCN18_26_2_15_R5_B_scaffold_748
Class: Alphaproteobacteria (57.89%)
19 19030 bp 66.75 27.53 93.67
SCN18_26_2_15_R5_B_scaffold_1139
Class: Alphaproteobacteria (75%)
12 12157 bp 64.96 27.53 93.82
SCN18_26_2_15_R5_B_scaffold_229
Class: Alphaproteobacteria (52.54%)
59 62825 bp 64.92 27.52 89.68
SCN18_26_2_15_R5_B_scaffold_534
Class: Alphaproteobacteria (51.52%)
33 26718 bp 67.05 27.50 91.01
SCN18_26_2_15_R5_B_scaffold_304
Class: Alphaproteobacteria (58.7%)
46 49072 bp 66.71 27.50 93.44
SCN18_26_2_15_R5_B_scaffold_1393
Order: Rhizobiales (55.56%)
9 9871 bp 67.15 27.47 97.22
SCN18_26_2_15_R5_B_scaffold_1764
Class: Alphaproteobacteria (56.25%)
16 7991 bp 66.59 27.46 83.57
SCN18_26_2_15_R5_B_scaffold_642
Class: Alphaproteobacteria (56.52%)
23 21853 bp 65.95 27.46 91.17
SCN18_26_2_15_R5_B_scaffold_637
Order: Rhizobiales (52.17%)
23 22031 bp 66.58 27.44 90.61
SCN18_26_2_15_R5_B_scaffold_1257
Class: Alphaproteobacteria (66.67%)
9 11039 bp 66.09 27.43 92.56
SCN18_26_2_15_R5_B_scaffold_827
Class: Alphaproteobacteria (50%)
18 17049 bp 66.24 27.42 94.58
SCN18_26_2_15_R5_B_scaffold_443
Class: Alphaproteobacteria (77.42%)
31 32873 bp 66.16 27.41 94.81
SCN18_26_2_15_R5_B_scaffold_510
Class: Alphaproteobacteria (53.85%)
26 28189 bp 66.30 27.41 94.76
SCN18_26_2_15_R5_B_scaffold_658
Class: Alphaproteobacteria (52.38%)
21 21463 bp 66.41 27.36 93.40
SCN18_26_2_15_R5_B_scaffold_516
Phylum: Proteobacteria (73.08%)
26 27890 bp 65.01 27.36 88.72
SCN18_26_2_15_R5_B_scaffold_1327
Class: Alphaproteobacteria (80%)
10 10344 bp 66.60 27.36 93.74
SCN18_26_2_15_R5_B_scaffold_461
Class: Alphaproteobacteria (75.76%)
33 31743 bp 65.67 27.34 94.22
Displaying items 101-150 of 445 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.