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SCN18_26_2_15_R5_B_Alphaproteobacteria_66_27

In projects: SCN18_26_2_15_R5_B  |  scn18_genomes  |  SCN_ET-SeqDB_Dereplicated  |  SCN_92

Consensus taxonomy: Alphaproteobacteria  →  Proteobacteria  →  Bacteria

Description

SCN18_26_2_15_R5_B_metabat2_012

Displaying items 201-250 of 445 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
SCN18_26_2_15_R5_B_scaffold_4285
Species: SCNPILOT_CONT_750_BF_Rhodospirillales_70_18 (100%)
2 3758 bp 70.12 26.82 99.87
SCN18_26_2_15_R5_B_scaffold_643
Class: Alphaproteobacteria (66.67%)
24 21815 bp 65.34 26.80 89.70
SCN18_26_2_15_R5_B_scaffold_986
Class: Alphaproteobacteria (66.67%)
15 13904 bp 67.76 26.79 95.15
SCN18_26_2_15_R5_B_scaffold_565
Class: Alphaproteobacteria (83.33%)
24 25310 bp 66.74 26.79 89.12
SCN18_26_2_15_R5_B_scaffold_398
Class: Alphaproteobacteria (60%)
30 36712 bp 66.78 26.78 94.52
SCN18_26_2_15_R5_B_scaffold_655
Order: Rhizobiales (55%)
20 21508 bp 66.66 26.75 89.21
SCN18_26_2_15_R5_B_scaffold_7230
Class: Alphaproteobacteria (66.67%)
3 2423 bp 66.65 26.74 99.55
SCN18_26_2_15_R5_B_scaffold_5768
Species: Magnetospirillum gryphiswaldense_SCNpilot_P_inoc_Magnetospirillum_64_120 (66.67%)
3 2967 bp 66.57 26.74 78.97
SCN18_26_2_15_R5_B_scaffold_630
Class: Alphaproteobacteria (95.24%)
21 22361 bp 66.88 26.73 90.57
SCN18_26_2_15_R5_B_scaffold_1532
Phylum: Proteobacteria (72.73%)
11 9071 bp 65.22 26.71 91.81
SCN18_26_2_15_R5_B_scaffold_1691
Class: Alphaproteobacteria (66.67%)
9 8294 bp 66.78 26.71 88.73
SCN18_26_2_15_R5_B_scaffold_810
Phylum: Proteobacteria (73.68%)
19 17470 bp 67.33 26.70 95.70
SCN18_26_2_15_R5_B_scaffold_697
Class: Alphaproteobacteria (57.14%)
21 20260 bp 66.41 26.68 93.75
SCN18_26_2_15_R5_B_scaffold_2622
Order: Rhizobiales (50%)
6 5684 bp 65.31 26.68 89.51
SCN18_26_2_15_R5_B_scaffold_2957
Species: SCNPILOT_EXPT_300_BF_Sphingomonas_67_13 (100%)
1 5167 bp 67.33 26.68 99.98
SCN18_26_2_15_R5_B_scaffold_2335
Order: Rhizobiales (60%)
5 6317 bp 65.52 26.67 95.74
SCN18_26_2_15_R5_B_scaffold_593
Order: Rhodospirillales (50%)
26 23995 bp 66.11 26.67 89.16
SCN18_26_2_15_R5_B_scaffold_5055
Order: Rhodospirillales (50%)
4 3314 bp 67.14 26.66 94.51
SCN18_26_2_15_R5_B_scaffold_1318
Order: Rhizobiales (90.91%)
11 10422 bp 66.65 26.66 95.48
SCN18_26_2_15_R5_B_scaffold_6172
Species: SCNPILOT_CONT_750_BF_Rhodospirillales_68_10 (50%)
2 2798 bp 62.22 26.64 78.27
SCN18_26_2_15_R5_B_scaffold_2041
Phylum: Proteobacteria (66.67%)
9 7132 bp 64.78 26.61 78.91
SCN18_26_2_15_R5_B_scaffold_1406
Order: Rhizobiales (66.67%)
6 9796 bp 67.50 26.60 93.68
SCN18_26_2_15_R5_B_scaffold_4062
Order: Rhizobiales (75%)
8 7495 bp 67.53 26.60 98.39
SCN18_26_2_15_R5_B_scaffold_498
Class: Alphaproteobacteria (50%)
24 29098 bp 65.49 26.58 91.38
SCN18_26_2_15_R5_B_scaffold_618
Species: SCNPILOT_CONT_750_BF_Rhodospirillales_70_18 (70%)
20 22795 bp 67.54 26.58 93.43
SCN18_26_2_15_R5_B_scaffold_2462
Class: Alphaproteobacteria (50%)
8 5998 bp 65.61 26.58 84.63
SCN18_26_2_15_R5_B_scaffold_432
Class: Alphaproteobacteria (69.23%)
39 34170 bp 65.14 26.57 93.43
SCN18_26_2_15_R5_B_scaffold_1969
Order: Rhizobiales (62.5%)
8 7338 bp 62.88 26.57 96.85
SCN18_26_2_15_R5_B_scaffold_1315
Order: Rhizobiales (66.67%)
9 10477 bp 66.66 26.56 95.41
SCN18_26_2_15_R5_B_scaffold_1200
Class: Alphaproteobacteria (66.67%)
12 11528 bp 67.58 26.56 96.26
SCN18_26_2_15_R5_B_scaffold_436
Phylum: Proteobacteria (77.14%)
35 33829 bp 67.52 26.54 92.30
SCN18_26_2_15_R5_B_scaffold_1039
Phylum: Proteobacteria (84.62%)
13 13245 bp 67.04 26.53 94.22
SCN18_26_2_15_R5_B_scaffold_452
Class: Alphaproteobacteria (50%)
28 32381 bp 66.38 26.48 87.06
SCN18_26_2_15_R5_B_scaffold_2946
Class: Alphaproteobacteria (50%)
4 5185 bp 67.93 26.47 97.26
SCN18_26_2_15_R5_B_scaffold_762
Class: Alphaproteobacteria (84.21%)
19 18691 bp 66.72 26.41 91.30
SCN18_26_2_15_R5_B_scaffold_624
Class: Alphaproteobacteria (82.61%)
23 22637 bp 66.78 26.41 89.53
SCN18_26_2_15_R5_B_scaffold_929
Class: Alphaproteobacteria (76.47%)
17 14867 bp 66.58 26.40 94.03
SCN18_26_2_15_R5_B_scaffold_698
Class: Alphaproteobacteria (70.59%)
17 20258 bp 67.01 26.38 92.23
SCN18_26_2_15_R5_B_scaffold_771
Class: Alphaproteobacteria (50%)
20 18444 bp 67.69 26.37 94.44
SCN18_26_2_15_R5_B_scaffold_8487
Species: SCNPILOT_CONT_750_BF_Rhodospirillales_68_10 (50%)
2 2077 bp 67.40 26.36 93.31
SCN18_26_2_15_R5_B_scaffold_294
Order: Rhodospirillales (61.22%)
49 50073 bp 65.49 26.29 93.36
SCN18_26_2_15_R5_B_scaffold_566
Class: Alphaproteobacteria (61.54%)
26 25270 bp 66.03 26.24 89.79
SCN18_26_2_15_R5_B_scaffold_1705
Class: Alphaproteobacteria (66.67%)
9 8265 bp 64.97 26.24 97.02
SCN18_26_2_15_R5_B_scaffold_946
Species: Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15 (100%)
18 14578 bp 67.12 26.23 95.16
SCN18_26_2_15_R5_B_scaffold_1513
Class: Alphaproteobacteria (60%)
10 9178 bp 66.70 26.21 94.56
SCN18_26_2_15_R5_B_scaffold_1070
Phylum: Proteobacteria (70%)
10 12869 bp 65.89 26.18 92.01
SCN18_26_2_15_R5_B_scaffold_1110
Class: Alphaproteobacteria (71.43%)
14 12420 bp 67.03 26.18 93.60
SCN18_26_2_15_R5_B_scaffold_607
Order: Rhodospirillales (52.38%)
21 23283 bp 67.15 26.18 93.44
SCN18_26_2_15_R5_B_scaffold_1382
Order: Rhizobiales (50%)
10 9965 bp 66.19 26.15 91.94
SCN18_26_2_15_R5_B_scaffold_1115
Phylum: Proteobacteria (93.75%)
16 12389 bp 67.37 26.14 98.02
Displaying items 201-250 of 445 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.