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SCN18_14_9_16_R1_B_Rhizobiales_65_9

In projects: SCN18_14_9_16_R1_B  |  scn18_genomes  |  SCN_ET-SeqDB_Dereplicated  |  SCN_92

Consensus taxonomy: Rhizobiales  →  Alphaproteobacteria  →  Proteobacteria  →  Bacteria

Description

Extracted from SCN18_14_9_16_R1_B_abawaca_094

Displaying items 301-350 of 1208 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
SCN18_14_9_16_R1_B_scaffold_8455
Species: Agrobacterium albertimagni_CN-SCN_Agrobacterium_19x (50%)
6 3378 bp 67.02 9.10 87.48
SCN18_14_9_16_R1_B_scaffold_6318
Species: SCNPILOT_CONT_500_BF_Rhizobiales_63_22 (83.33%)
6 4477 bp 62.83 7.47 92.41
SCN18_14_9_16_R1_B_scaffold_3992
Order: Rhizobiales (50%)
6 6744 bp 66.77 9.10 95.02
SCN18_14_9_16_R1_B_scaffold_4115
Species: SCNPILOT_CONT_1000_BF_Mesorhizobium_65_39 (66.67%)
6 6581 bp 59.34 14.43 88.21
SCN18_14_9_16_R1_B_scaffold_3996
Order: Rhizobiales (83.33%)
6 6739 bp 68.66 7.26 92.64
SCN18_14_9_16_R1_B_scaffold_5256
Order: Rhizobiales (83.33%)
6 5341 bp 65.96 8.76 89.87
SCN18_14_9_16_R1_B_scaffold_5527
Species: Agrobacterium albertimagni_CN-SCN_Agrobacterium_19x (50%)
6 5083 bp 64.45 11.10 90.01
SCN18_14_9_16_R1_B_scaffold_6090
Species: SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7 (100%)
6 7242 bp 65.04 9.49 88.40
SCN18_14_9_16_R1_B_scaffold_5019
Species: SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7 (50%)
6 5558 bp 67.54 10.20 85.17
SCN18_14_9_16_R1_B_scaffold_5532
Species: SCNPILOT_CONT_1000_BF_Rhizobiales_65_79 (100%)
6 5080 bp 64.74 5.43 97.20
SCN18_14_9_16_R1_B_scaffold_12121
Order: Rhizobiales (66.67%)
6 2335 bp 58.59 6.55 64.50
SCN18_14_9_16_R1_B_scaffold_5283
Species: SCNPILOT_CONT_1000_BF_Rhizobiales_65_79 (100%)
6 5320 bp 65.94 11.22 91.18
SCN18_14_9_16_R1_B_scaffold_9567
Species: Agrobacterium albertimagni_CN-SCN_Agrobacterium_19x (50%)
6 4064 bp 67.00 8.23 98.11
SCN18_14_9_16_R1_B_scaffold_7751
Species: SCNPILOT_CONT_1000_BF_Rhizobiales_65_79 (100%)
6 5556 bp 62.89 7.32 88.07
SCN18_14_9_16_R1_B_scaffold_9314
Order: Rhizobiales (66.67%)
6 3081 bp 59.53 8.23 91.82
SCN18_14_9_16_R1_B_scaffold_5038
Species: Agrobacterium albertimagni_CN-SCN_Agrobacterium_19x (66.67%)
6 5543 bp 65.25 9.74 88.71
SCN18_14_9_16_R1_B_scaffold_2980
Species: SCNPILOT_CONT_1000_BF_Rhizobiales_65_79 (100%)
6 8549 bp 64.34 9.21 88.08
SCN18_14_9_16_R1_B_scaffold_6118
Species: SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7 (83.33%)
6 4620 bp 66.30 10.71 91.23
SCN18_14_9_16_R1_B_scaffold_3535
Species: SCNPILOT_CONT_1000_BF_Rhizobiales_65_79 (100%)
6 7428 bp 62.90 8.40 92.16
SCN18_14_9_16_R1_B_scaffold_7257
Species: SCNPILOT_CONT_1000_BF_Rhizobiales_65_79 (100%)
6 3931 bp 65.99 10.04 94.48
SCN18_14_9_16_R1_B_scaffold_5818
Species: SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial (50%)
6 4847 bp 67.71 7.40 96.43
SCN18_14_9_16_R1_B_scaffold_3795
Order: Rhizobiales (50%)
6 7033 bp 63.02 6.31 99.86
SCN18_14_9_16_R1_B_scaffold_11660
Order: Rhizobiales (66.67%)
6 2434 bp 66.68 9.49 82.09
SCN18_14_9_16_R1_B_scaffold_4693
Order: Rhizobiales (66.67%)
6 5893 bp 68.96 7.38 98.10
SCN18_14_9_16_R1_B_scaffold_5833
Species: Agrobacterium albertimagni_CN-SCN_Agrobacterium_19x (50%)
6 4836 bp 66.34 9.00 83.93
SCN18_14_9_16_R1_B_scaffold_6401
Species: SCNPILOT_CONT_1000_BF_Rhizobiales_65_79 (100%)
6 4429 bp 68.73 9.48 97.95
SCN18_14_9_16_R1_B_scaffold_7284
Species: SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7 (66.67%)
6 3914 bp 64.59 10.69 99.03
SCN18_14_9_16_R1_B_scaffold_7540
Species: Agrobacterium albertimagni_CN-SCN_Agrobacterium_19x (50%)
6 3777 bp 66.61 8.74 93.80
SCN18_14_9_16_R1_B_scaffold_8293
Order: Rhizobiales (100%)
6 5113 bp 66.58 9.77 88.89
SCN18_14_9_16_R1_B_scaffold_15408
Order: Rhizobiales (50%)
6 1784 bp 61.60 5.72 79.37
SCN18_14_9_16_R1_B_scaffold_3825
Species: SCNPILOT_CONT_1000_BF_Rhizobiales_65_79 (100%)
6 6993 bp 64.45 9.33 96.22
SCN18_14_9_16_R1_B_scaffold_9873
Order: Rhizobiales (100%)
6 2890 bp 69.03 7.99 73.70
SCN18_14_9_16_R1_B_scaffold_4716
Species: SCNPILOT_CONT_1000_BF_Rhizobiales_65_79 (100%)
6 5869 bp 65.60 10.66 85.11
SCN18_14_9_16_R1_B_scaffold_2513
Order: Rhizobiales (50%)
6 9765 bp 68.64 8.02 96.74
SCN18_14_9_16_R1_B_scaffold_5091
Species: Agrobacterium albertimagni_CN-SCN_Agrobacterium_19x (50%)
6 5500 bp 64.45 12.30 83.40
SCN18_14_9_16_R1_B_scaffold_6679
Species: SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7 (66.67%)
6 4254 bp 69.04 8.53 98.10
SCN18_14_9_16_R1_B_scaffold_6168
Species: SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7 (66.67%)
6 4587 bp 66.08 10.14 93.53
SCN18_14_9_16_R1_B_scaffold_8056
Order: Rhizobiales (66.67%)
6 3538 bp 66.70 8.69 88.02
SCN18_14_9_16_R1_B_scaffold_11198
Species: SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7 (50%)
6 2532 bp 61.14 17.18 91.11
SCN18_14_9_16_R1_B_scaffold_8832
Species: Agrobacterium albertimagni_CN-SCN_Agrobacterium_19x (50%)
6 3246 bp 66.27 8.64 85.21
SCN18_14_9_16_R1_B_scaffold_5362
Species: Agrobacterium albertimagni_CN-SCN_Agrobacterium_19x (50%)
6 5239 bp 66.04 7.73 88.41
SCN18_14_9_16_R1_B_scaffold_7061
Order: Rhizobiales (83.33%)
6 4918 bp 68.08 9.85 91.81
SCN18_14_9_16_R1_B_scaffold_5877
Species: SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7 (50%)
6 4803 bp 68.31 10.09 94.69
SCN18_14_9_16_R1_B_scaffold_3342
Species: SCNPILOT_CONT_1000_BF_Rhizobiales_65_79 (100%)
6 7785 bp 67.06 9.06 91.79
SCN18_14_9_16_R1_B_scaffold_6182
Species: SCNPILOT_CONT_1000_BF_Rhizobiales_65_79 (100%)
6 4574 bp 63.77 10.72 90.84
SCN18_14_9_16_R1_B_scaffold_4230
Order: Rhizobiales (100%)
6 7412 bp 65.73 10.67 91.39
SCN18_14_9_16_R1_B_scaffold_3599
Species: SCNPILOT_CONT_1000_BF_Rhizobiales_65_79 (100%)
6 7335 bp 66.64 9.10 91.45
SCN18_14_9_16_R1_B_scaffold_6440
Order: Rhizobiales (83.33%)
6 4404 bp 65.80 9.50 76.23
SCN18_14_9_16_R1_B_scaffold_6697
Species: SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7 (66.67%)
6 4244 bp 66.05 10.64 86.24
SCN18_14_9_16_R1_B_scaffold_5883
Species: SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7 (83.33%)
6 4799 bp 67.76 10.69 97.40
Displaying items 301-350 of 1208 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.