Consensus taxonomy: Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria
Extracted from SCN18_14_9_16_R1_B_abawaca_094
contig | # features | sequence size | GC content (%) | Cov | Coding Density (%) | |
---|---|---|---|---|---|---|
SCN18_14_9_16_R1_B_scaffold_8455
Species:
Agrobacterium albertimagni_CN-SCN_Agrobacterium_19x (50%)
|
6 | 3378 bp | 67.02 | 9.10 | 87.48 | |
SCN18_14_9_16_R1_B_scaffold_6318
Species:
SCNPILOT_CONT_500_BF_Rhizobiales_63_22 (83.33%)
|
6 | 4477 bp | 62.83 | 7.47 | 92.41 | |
SCN18_14_9_16_R1_B_scaffold_3992
Order:
Rhizobiales (50%)
|
6 | 6744 bp | 66.77 | 9.10 | 95.02 | |
SCN18_14_9_16_R1_B_scaffold_4115
Species:
SCNPILOT_CONT_1000_BF_Mesorhizobium_65_39 (66.67%)
|
6 | 6581 bp | 59.34 | 14.43 | 88.21 | |
SCN18_14_9_16_R1_B_scaffold_3996
Order:
Rhizobiales (83.33%)
|
6 | 6739 bp | 68.66 | 7.26 | 92.64 | |
SCN18_14_9_16_R1_B_scaffold_5256
Order:
Rhizobiales (83.33%)
|
6 | 5341 bp | 65.96 | 8.76 | 89.87 | |
SCN18_14_9_16_R1_B_scaffold_5527
Species:
Agrobacterium albertimagni_CN-SCN_Agrobacterium_19x (50%)
|
6 | 5083 bp | 64.45 | 11.10 | 90.01 | |
SCN18_14_9_16_R1_B_scaffold_6090
Species:
SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7 (100%)
|
6 | 7242 bp | 65.04 | 9.49 | 88.40 | |
SCN18_14_9_16_R1_B_scaffold_5019
Species:
SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7 (50%)
|
6 | 5558 bp | 67.54 | 10.20 | 85.17 | |
SCN18_14_9_16_R1_B_scaffold_5532
Species:
SCNPILOT_CONT_1000_BF_Rhizobiales_65_79 (100%)
|
6 | 5080 bp | 64.74 | 5.43 | 97.20 | |
SCN18_14_9_16_R1_B_scaffold_12121
Order:
Rhizobiales (66.67%)
|
6 | 2335 bp | 58.59 | 6.55 | 64.50 | |
SCN18_14_9_16_R1_B_scaffold_5283
Species:
SCNPILOT_CONT_1000_BF_Rhizobiales_65_79 (100%)
|
6 | 5320 bp | 65.94 | 11.22 | 91.18 | |
SCN18_14_9_16_R1_B_scaffold_9567
Species:
Agrobacterium albertimagni_CN-SCN_Agrobacterium_19x (50%)
|
6 | 4064 bp | 67.00 | 8.23 | 98.11 | |
SCN18_14_9_16_R1_B_scaffold_7751
Species:
SCNPILOT_CONT_1000_BF_Rhizobiales_65_79 (100%)
|
6 | 5556 bp | 62.89 | 7.32 | 88.07 | |
SCN18_14_9_16_R1_B_scaffold_9314
Order:
Rhizobiales (66.67%)
|
6 | 3081 bp | 59.53 | 8.23 | 91.82 | |
SCN18_14_9_16_R1_B_scaffold_5038
Species:
Agrobacterium albertimagni_CN-SCN_Agrobacterium_19x (66.67%)
|
6 | 5543 bp | 65.25 | 9.74 | 88.71 | |
SCN18_14_9_16_R1_B_scaffold_2980
Species:
SCNPILOT_CONT_1000_BF_Rhizobiales_65_79 (100%)
|
6 | 8549 bp | 64.34 | 9.21 | 88.08 | |
SCN18_14_9_16_R1_B_scaffold_6118
Species:
SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7 (83.33%)
|
6 | 4620 bp | 66.30 | 10.71 | 91.23 | |
SCN18_14_9_16_R1_B_scaffold_3535
Species:
SCNPILOT_CONT_1000_BF_Rhizobiales_65_79 (100%)
|
6 | 7428 bp | 62.90 | 8.40 | 92.16 | |
SCN18_14_9_16_R1_B_scaffold_7257
Species:
SCNPILOT_CONT_1000_BF_Rhizobiales_65_79 (100%)
|
6 | 3931 bp | 65.99 | 10.04 | 94.48 | |
SCN18_14_9_16_R1_B_scaffold_5818
Species:
SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial (50%)
|
6 | 4847 bp | 67.71 | 7.40 | 96.43 | |
SCN18_14_9_16_R1_B_scaffold_3795
Order:
Rhizobiales (50%)
|
6 | 7033 bp | 63.02 | 6.31 | 99.86 | |
SCN18_14_9_16_R1_B_scaffold_11660
Order:
Rhizobiales (66.67%)
|
6 | 2434 bp | 66.68 | 9.49 | 82.09 | |
SCN18_14_9_16_R1_B_scaffold_4693
Order:
Rhizobiales (66.67%)
|
6 | 5893 bp | 68.96 | 7.38 | 98.10 | |
SCN18_14_9_16_R1_B_scaffold_5833
Species:
Agrobacterium albertimagni_CN-SCN_Agrobacterium_19x (50%)
|
6 | 4836 bp | 66.34 | 9.00 | 83.93 | |
SCN18_14_9_16_R1_B_scaffold_6401
Species:
SCNPILOT_CONT_1000_BF_Rhizobiales_65_79 (100%)
|
6 | 4429 bp | 68.73 | 9.48 | 97.95 | |
SCN18_14_9_16_R1_B_scaffold_7284
Species:
SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7 (66.67%)
|
6 | 3914 bp | 64.59 | 10.69 | 99.03 | |
SCN18_14_9_16_R1_B_scaffold_7540
Species:
Agrobacterium albertimagni_CN-SCN_Agrobacterium_19x (50%)
|
6 | 3777 bp | 66.61 | 8.74 | 93.80 | |
SCN18_14_9_16_R1_B_scaffold_8293
Order:
Rhizobiales (100%)
|
6 | 5113 bp | 66.58 | 9.77 | 88.89 | |
SCN18_14_9_16_R1_B_scaffold_15408
Order:
Rhizobiales (50%)
|
6 | 1784 bp | 61.60 | 5.72 | 79.37 | |
SCN18_14_9_16_R1_B_scaffold_3825
Species:
SCNPILOT_CONT_1000_BF_Rhizobiales_65_79 (100%)
|
6 | 6993 bp | 64.45 | 9.33 | 96.22 | |
SCN18_14_9_16_R1_B_scaffold_9873
Order:
Rhizobiales (100%)
|
6 | 2890 bp | 69.03 | 7.99 | 73.70 | |
SCN18_14_9_16_R1_B_scaffold_4716
Species:
SCNPILOT_CONT_1000_BF_Rhizobiales_65_79 (100%)
|
6 | 5869 bp | 65.60 | 10.66 | 85.11 | |
SCN18_14_9_16_R1_B_scaffold_2513
Order:
Rhizobiales (50%)
|
6 | 9765 bp | 68.64 | 8.02 | 96.74 | |
SCN18_14_9_16_R1_B_scaffold_5091
Species:
Agrobacterium albertimagni_CN-SCN_Agrobacterium_19x (50%)
|
6 | 5500 bp | 64.45 | 12.30 | 83.40 | |
SCN18_14_9_16_R1_B_scaffold_6679
Species:
SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7 (66.67%)
|
6 | 4254 bp | 69.04 | 8.53 | 98.10 | |
SCN18_14_9_16_R1_B_scaffold_6168
Species:
SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7 (66.67%)
|
6 | 4587 bp | 66.08 | 10.14 | 93.53 | |
SCN18_14_9_16_R1_B_scaffold_8056
Order:
Rhizobiales (66.67%)
|
6 | 3538 bp | 66.70 | 8.69 | 88.02 | |
SCN18_14_9_16_R1_B_scaffold_11198
Species:
SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7 (50%)
|
6 | 2532 bp | 61.14 | 17.18 | 91.11 | |
SCN18_14_9_16_R1_B_scaffold_8832
Species:
Agrobacterium albertimagni_CN-SCN_Agrobacterium_19x (50%)
|
6 | 3246 bp | 66.27 | 8.64 | 85.21 | |
SCN18_14_9_16_R1_B_scaffold_5362
Species:
Agrobacterium albertimagni_CN-SCN_Agrobacterium_19x (50%)
|
6 | 5239 bp | 66.04 | 7.73 | 88.41 | |
SCN18_14_9_16_R1_B_scaffold_7061
Order:
Rhizobiales (83.33%)
|
6 | 4918 bp | 68.08 | 9.85 | 91.81 | |
SCN18_14_9_16_R1_B_scaffold_5877
Species:
SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7 (50%)
|
6 | 4803 bp | 68.31 | 10.09 | 94.69 | |
SCN18_14_9_16_R1_B_scaffold_3342
Species:
SCNPILOT_CONT_1000_BF_Rhizobiales_65_79 (100%)
|
6 | 7785 bp | 67.06 | 9.06 | 91.79 | |
SCN18_14_9_16_R1_B_scaffold_6182
Species:
SCNPILOT_CONT_1000_BF_Rhizobiales_65_79 (100%)
|
6 | 4574 bp | 63.77 | 10.72 | 90.84 | |
SCN18_14_9_16_R1_B_scaffold_4230
Order:
Rhizobiales (100%)
|
6 | 7412 bp | 65.73 | 10.67 | 91.39 | |
SCN18_14_9_16_R1_B_scaffold_3599
Species:
SCNPILOT_CONT_1000_BF_Rhizobiales_65_79 (100%)
|
6 | 7335 bp | 66.64 | 9.10 | 91.45 | |
SCN18_14_9_16_R1_B_scaffold_6440
Order:
Rhizobiales (83.33%)
|
6 | 4404 bp | 65.80 | 9.50 | 76.23 | |
SCN18_14_9_16_R1_B_scaffold_6697
Species:
SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7 (66.67%)
|
6 | 4244 bp | 66.05 | 10.64 | 86.24 | |
SCN18_14_9_16_R1_B_scaffold_5883
Species:
SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7 (83.33%)
|
6 | 4799 bp | 67.76 | 10.69 | 97.40 |