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cn_combo_scaffold_1005_2

Organism: CN-SCN_Cytophagaceae_12x

partial RP 39 / 55 BSCG 38 / 51 ASCG 12 / 38
Location: comp(101..1192)

Top 3 Functional Annotations

Value Algorithm Source
FecR anti-FecI sigma factor n=1 Tax=Flavobacterium sp. F52 RepID=J1AJ84_9FLAO similarity UNIREF
DB: UNIREF100
  • Identity: 32.0
  • Coverage: 378.0
  • Bit_score: 200
  • Evalue 2.30e-48
anti-FecI sigma factor FecR similarity KEGG
DB: KEGG
  • Identity: 35.6
  • Coverage: 374.0
  • Bit_score: 200
  • Evalue 8.60e-49
FecR anti-FecI sigma factor {ECO:0000313|EMBL:EJG02359.1}; TaxID=1202532 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium similarity UNIPROT
DB: UniProtKB
  • Identity: 32.0
  • Coverage: 378.0
  • Bit_score: 200
  • Evalue 3.30e-48

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Taxonomy

Flavobacterium sp. F52 → Flavobacterium → Flavobacteriales → Flavobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 1092
ATGAAGGGCTGGACACAGTACACTTCCGCCGATGAATTCGCCGGTGACGGCACATTCCGAAACTGGGTAGCTTCCGGGACTTACGGTCAGGAAGGACATCCTTTCACCCGGTTTCTGGCCGGGCATGCACATCTTATTCCTCTGGCCGACCAGGCCGCCGACCTGCTGAGGGTAACGGCTTTCCCGGACAAAAAGCTGACCGACAACGAGCTGAAGGCCCAAATGGACGGGACCTGGGAAAAAATCAGGCTCCGGGAAAATACCGGCTCTTTTTCAGGAAATCCGCAGCGTCGGCTCTGGCTGCGGTGGGCAGCGGCGGCAGTACTGGCGATCGCAGGGGGGCTGGCCTTGCTTGAATATCAGAAAACTACTGTTCTGCCCGGGATATCCGGGAATTTTCCGGAGCATTCCGACAGCTGGCAGGTGGTCACCAACCAGACGGATGACGTCAGGCCCCTCAGCTTGTCCGACGGCAGCATGGTCTGGCTCGAGCCCGGCAGCGAGCTGCGTTATCCCGTAGCTTTCGAAGCGGAAAAGCGGGAGGTGTTGCTGGATGGCGAAGCTTTTTTTGAAGTTTCGAAAAATGCCCGGCGACCGTTTTACGTGAAAACGCACAATTTGATTACCCGCGTTGTCGGCACCAGCTTTCTTGTCAGGACACTGGAGGAAAACAAAAGTACGCTCGTCCAGGTCCGTACGGGAAAGGTGCTGGTTTACAGGGCGGAAAACGGCGCTGGCAAGGAGGAACCCGTAGCGGTAGAGGCTAATCAGCAGCTGCGTTTATCGGGAGATCCGGCAATATTGCTGACAGAACCGGTCAGCCAGCCTTCCGTGCTTTCTGAGAGGCTCGATGAACACCGTTTTGAATTTACGGACGTACCGGTACCGATAGTACTGAACGCGCTGTCGGCTGCCTACGGCCTGTCGTTATCGTATAGCGAGGCCGATTTCCGGAACTGCCGGATCACGACGGCTTTAACGGACGAGCCGCTTACTGAAAAGCTGAACATTTTAGCGGAAACGATCGGTGCAGGAACCAGGGCCGAATTAGACGGCGACAGGATCCGGCTCACCGGCGCAGGATGTCCTTAA
PROTEIN sequence
Length: 364
MKGWTQYTSADEFAGDGTFRNWVASGTYGQEGHPFTRFLAGHAHLIPLADQAADLLRVTAFPDKKLTDNELKAQMDGTWEKIRLRENTGSFSGNPQRRLWLRWAAAAVLAIAGGLALLEYQKTTVLPGISGNFPEHSDSWQVVTNQTDDVRPLSLSDGSMVWLEPGSELRYPVAFEAEKREVLLDGEAFFEVSKNARRPFYVKTHNLITRVVGTSFLVRTLEENKSTLVQVRTGKVLVYRAENGAGKEEPVAVEANQQLRLSGDPAILLTEPVSQPSVLSERLDEHRFEFTDVPVPIVLNALSAAYGLSLSYSEADFRNCRITTALTDEPLTEKLNILAETIGAGTRAELDGDRIRLTGAGCP*