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berkeley_reactor_200306_biofilm_scaffold_9338_41

Organism: 2019_SCN_bioreactor_200211_biofilm_Rhizobiales_70_15

near complete RP 48 / 55 BSCG 46 / 51 ASCG 10 / 38 MC: 1
Location: 40610..41467

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator n=1 Tax=Rhizobium loti (strain MAFF303099) RepID=Q98HR2_RHILO similarity UNIREF
DB: UNIREF100
  • Identity: 81.4
  • Coverage: 285.0
  • Bit_score: 462
  • Evalue 2.00e-127
HTH-type transcriptional regulator DgdR {ECO:0000313|EMBL:CDX32266.1}; TaxID=1505933 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. ORS3359.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 82.5
  • Coverage: 285.0
  • Bit_score: 464
  • Evalue 9.50e-128
transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 81.4
  • Coverage: 285.0
  • Bit_score: 462
  • Evalue 5.60e-128

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Taxonomy

Mesorhizobium sp. ORS3359 → Mesorhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 858
ATGGCCGCTCCGCTCGACCTCGACCTGCTCCGCACCTTCGTCGCCGTCGCCGAGTGCGGCAGCTTCTCCGGCGCCGCGCCCCGGATCGGCCGCAGCCAGTCGGCGGTGAGCATGCAGATGCAGCGGCTGGAGCAGACCGTCGGCCGGCAGCTCCTGGTCCGCAGTCCGCGCGCCGTCGCGCCGAGCGCGGCCGGCGCGGACCTGCTGATCCATGCGCGGCGGCTGCTGAAGCTGTCGGACGAGGCCTGGGCGAGCGTGACGCGGCCCGAGGAGGCCGGCGCCGTTCGCCTCGGCGTGCCCGACGACTATGCCGCCTTCCTGCTGCCGCCGGCGCTCTCGCGCTTCGCCGCGGCTCATCCGCTGGTGACGGTCGAGCTCGTCTGCGAGCAGTCGACCGCCCTGGTGAAGACCATGGCCGAGGGACGGCTCGACCTGGCGATCGTCACGCGGCTGCCCGAGCAGCCGCTCGATGTGCTGAGGCGCGAGCGCTTCGTCTGGGTTGCCTCGCCCAACCACGTCGCCTGGCGGACCGATCCCCTACCGATCGCCCTGTTCGAGCCCGGCTGCGTCGCGCGATCGAGCGTGCTGCAGGCCCTGGGCGACGCCGATCGCGCCTATCGCTGCGCCTATTCCAGCGCCAGCCTGCTCGGCCTCGTCGCCGTGGTCCAGGCGGGGCTGGCGGTGGCCGGCCTCGTGCTGCTCAGCGTTCCCCCCACCCTGCGCGTCATCGGCGAGGCCGAAGGGCTGCCGCCGCTGCCGGACCTGGAGATCGGCATCCTGCGCAACCCGCACGCGACCGAGCCCGCCGTCGACCGGCTGCACGATTTTCTTCGCCGCGACCTCGTGGAGGCCGCCTGA
PROTEIN sequence
Length: 286
MAAPLDLDLLRTFVAVAECGSFSGAAPRIGRSQSAVSMQMQRLEQTVGRQLLVRSPRAVAPSAAGADLLIHARRLLKLSDEAWASVTRPEEAGAVRLGVPDDYAAFLLPPALSRFAAAHPLVTVELVCEQSTALVKTMAEGRLDLAIVTRLPEQPLDVLRRERFVWVASPNHVAWRTDPLPIALFEPGCVARSSVLQALGDADRAYRCAYSSASLLGLVAVVQAGLAVAGLVLLSVPPTLRVIGEAEGLPPLPDLEIGILRNPHATEPAVDRLHDFLRRDLVEAA*