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berkeley_reactor_200306_biofilm_scaffold_7733_39

Organism: 2019_SCN_bioreactor_200211_biofilm_Rhizobiales_70_15

near complete RP 48 / 55 BSCG 46 / 51 ASCG 10 / 38 MC: 1
Location: 43488..44555

Top 3 Functional Annotations

Value Algorithm Source
Secreted sugar-binding protein n=1 Tax=Pelagibaca bermudensis (strain JCM 13377 / KCTC 12554 / HTCC2601) RepID=Q0FK54_PELBH similarity UNIREF
DB: UNIREF100
  • Identity: 43.3
  • Coverage: 356.0
  • Bit_score: 280
  • Evalue 1.30e-72
ABC transporter periplasmic-binding protein ytfQ similarity KEGG
DB: KEGG
  • Identity: 43.1
  • Coverage: 357.0
  • Bit_score: 280
  • Evalue 4.90e-73
Secreted sugar-binding protein {ECO:0000313|EMBL:EAU44551.1}; TaxID=314265 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Pelagibaca.;" source="Pelagibaca bermudensis (strain JCM 13377 / KCTC 12554 / HTCC2601).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 43.3
  • Coverage: 356.0
  • Bit_score: 280
  • Evalue 1.90e-72

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Taxonomy

Pelagibaca bermudensis → Pelagibaca → Rhodobacterales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1068
ATGGCATCGTCAAGCTTCGGGTGGGGACTTCGGGCCGCGGTCGCGGCGCTGGGCCTGGCGACGTCCGGCCTCGCCCCGGCCTCGGCGGCCGACAAGGGCACGATCGTGGTGTTCGTGCCGTCGAGCACCAACCCCTATATCGGCCAGTTCCAGAAGGGCGCCCGGGATAAGGCGGCCGGGCTCGGCTACACCATCAAGGTCATCGAGAACAACTTCAACCAGGCCGAGCAGGACAGCCAGGTGCAGCAGCAGCTCGCATCGGGCGAGGCGGTGGCGGGCTATGTCTGGTGGCCGTTCGAGAACGCGGCGGGCCTGGGCTCGCTCCGCGCCCTGTCGCAGTCGGGCGCGCCGGTGATCGTCTCGAACCAGTATCCGATCAAGGGCACCGAGGCCTACTGGACCGCCTATGCCGGCGCCAACGACTTCCTGAGCGGCAAGACGGCGGCCGAGCTCCTGCTCGACGCCTGCGCCAAGGCGCCGATCAAGTGCGGCAAGGGGGCGATCATCCGCTTCCCCGCCGGTGTCTCCGCCGGCGACGACCGGGTGACCGGCTTCCAGGATGCGGTCAAGGGCAAGCTGGAGACGATCGCCGTGGTGCCGACCGCCGGCTTCCTCGAGGACGAGGGCTACAAGGTCGCCGCGCAGATCATCCCGGCCAACAAGGGCGTGCTGACCTGGCTCTATACGGAGAACGACTCCATCGCCGGCGCGGCGACGCAGGCGGCCCGCGAGAACGGCCTGACGCCGGGCAAGGATATCCTGATCGTCGGCGGCACCTGCCACGGCGATTCCAGCCATGTCGTCAACGGCGAGCTGGTCGGCACCGCCATCCAGTCCGGCTATTTCGAAGGCTGGCTCGCGGTGCAGACGCTGGCCAAGTTCGTCAACACCGGCAAGGTCGAGGACGGCGAGGTCTATGTCGAGGCCGGCCCGGACGCGCCGCCCTCGGACGAGGGCGCGCCGCACAAGTACAATTTCCTGCCGAACCCGCCGGTCGGCAATTCGCAGCAGGCCTATGATCAGACCAAGCTCTGGGGCCGCACGGCCAAGGAGCTGTGCAACTTCTGA
PROTEIN sequence
Length: 356
MASSSFGWGLRAAVAALGLATSGLAPASAADKGTIVVFVPSSTNPYIGQFQKGARDKAAGLGYTIKVIENNFNQAEQDSQVQQQLASGEAVAGYVWWPFENAAGLGSLRALSQSGAPVIVSNQYPIKGTEAYWTAYAGANDFLSGKTAAELLLDACAKAPIKCGKGAIIRFPAGVSAGDDRVTGFQDAVKGKLETIAVVPTAGFLEDEGYKVAAQIIPANKGVLTWLYTENDSIAGAATQAARENGLTPGKDILIVGGTCHGDSSHVVNGELVGTAIQSGYFEGWLAVQTLAKFVNTGKVEDGEVYVEAGPDAPPSDEGAPHKYNFLPNPPVGNSQQAYDQTKLWGRTAKELCNF*