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berkeley_reactor_200306_biofilm_scaffold_7733_40

Organism: 2019_SCN_bioreactor_200211_biofilm_Rhizobiales_70_15

near complete RP 48 / 55 BSCG 46 / 51 ASCG 10 / 38 MC: 1
Location: 44609..46093

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Rhodococcus sp. 29MFTsu3.1 RepID=UPI00037FCAD4 similarity UNIREF
DB: UNIREF100
  • Identity: 52.6
  • Coverage: 492.0
  • Bit_score: 486
  • Evalue 2.20e-134
Ribose import ATP-binding protein RbsA similarity KEGG
DB: KEGG
  • Identity: 51.7
  • Coverage: 495.0
  • Bit_score: 478
  • Evalue 1.30e-132
Ribose import ATP-binding protein RbsA {ECO:0000313|EMBL:AHK34259.1}; TaxID=543736 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus.;" source="Rhodococcus opacus PD630.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 51.7
  • Coverage: 495.0
  • Bit_score: 478
  • Evalue 6.50e-132

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Taxonomy

Rhodococcus opacus → Rhodococcus → Corynebacteriales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 1485
ATGCTGCGCATGACCAAGATCGCCAAGCGCTACGGCGCGGCCGTCGCCCTGGAGAGCGTCGACCTGGAGGTGCGGCGCGGCGAGGTGATGGCGCTGCTCGGCGAGAACGGCGCCGGCAAGAGCACGCTCGTCAAGATCCTCGCCGGGGTCGAGACGCCGGACGCGGGGACGATCGAGATCGCGGGAACGCCGCGCGCCATCCGCTCGCCCGTGCAGTCCCAGGCCGCCGGCATCGCCTATGTCGCGCAGGAGCTCAGCATCGTCGAGACGCTGTCGGTGGCCGAGAACGTCTTCCTCGGCGACGGGAGCGTCGGCGTCTGGCGCTCGCCGGCGAGGCTGGCCCGCCTGGCCGGGCCCTTCCTCGCCCGCGTCGGGCTCGACCATGTCGACCCCCTGCAGGCGGCCGGCTCGATCTCCGTGGCGGAGCGCCAGCTCGTCGAGATCGCCCGGCTGCTGTCGCGCAAGGCGGTCATCGCCATCCTCGACGAGCCGACGGCGGCGCTGTCCGACGCCGAGATCGCGCGCGTCAAGGCCGCGGTGCGCGCCCTGTCGGCCGAGGGCTGCGCCATCGTCTACGTCACCCACCGGCTTGGCGAGGTGTTCGAGCTCGCCGGGCGCGTCACCATCATCCGCAACGGGCGCAGTTTCCCGCCGGTGGCGACAGCCTCGCTCGACGTCGACGGGCTGATCGAGCGCATGCTCGGGCGACGGCTCGACCAGATGTTCCCGCCGCGGGCAGAGGCCTTCGGCGAGACCCTGCTCGCCGTGGAGGCGGGGCTGTGCCGCGGCCTGCAGGCGCCGCTGTCGTTCCGGCTGCGGCAGGGCGAGATCCTGGCGCTGGCCGGGCAGGTCGGCAGCGGCGCCAATGCGGTGCTGCGCATGCTGGCCGGCACGGTGCCGGCCCAGCAGGGCCGCCTGACGCTCGCCGGCCGGCCCTATGCGCCGCGCTCGATCGCCGATGCCATCGCGGCCGGGGTCGGCTATTGCTCCGACGACCGCAAGCGCGACGGCATCTTCGCCGCGCGCAGCCTGGTGGAGAACCTGTCGGCCCCGGCGCTCGACCGGGTGACGCGCCTGGCGCTGATCGATGCCGGCGCCGAGCGGGCCCATACCAGGACGATCGCCGGGCAGTTCGGCCTCGATCCCGACCGCCTCGGCCGGCTTGCAGGCCATCTCAGCGGCGGCAACCAGCAGAAGGTCGCGCTCGGCAAATGGATCGGCCTGCCGCCGCGCCTGCTCCTGGTGGAGGAGCCGACCCGCGGCGTCGACGTCGGGGCGCGGGCCGAGATCTACCGGCACCTGCGGGCCCAGGCGCAGGCCGGCCTCGCCATCCTGTTCTCCTCCTCCGACACCCAGGAGGTGCTCGGCCTCGCCGACCGGGTCGCGACCTTCTATCACGGCCGCCTGGTTGGTCTGGCCGAGGCCGCGGCGCACACGGTCGAGAGCATCACGCGCGACGTCACCCATCCCGATCTCGCCGCGTGA
PROTEIN sequence
Length: 495
MLRMTKIAKRYGAAVALESVDLEVRRGEVMALLGENGAGKSTLVKILAGVETPDAGTIEIAGTPRAIRSPVQSQAAGIAYVAQELSIVETLSVAENVFLGDGSVGVWRSPARLARLAGPFLARVGLDHVDPLQAAGSISVAERQLVEIARLLSRKAVIAILDEPTAALSDAEIARVKAAVRALSAEGCAIVYVTHRLGEVFELAGRVTIIRNGRSFPPVATASLDVDGLIERMLGRRLDQMFPPRAEAFGETLLAVEAGLCRGLQAPLSFRLRQGEILALAGQVGSGANAVLRMLAGTVPAQQGRLTLAGRPYAPRSIADAIAAGVGYCSDDRKRDGIFAARSLVENLSAPALDRVTRLALIDAGAERAHTRTIAGQFGLDPDRLGRLAGHLSGGNQQKVALGKWIGLPPRLLLVEEPTRGVDVGARAEIYRHLRAQAQAGLAILFSSSDTQEVLGLADRVATFYHGRLVGLAEAAAHTVESITRDVTHPDLAA*