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berkeley_reactor_200306_biofilm_scaffold_7733_41

Organism: 2019_SCN_bioreactor_200211_biofilm_Rhizobiales_70_15

near complete RP 48 / 55 BSCG 46 / 51 ASCG 10 / 38 MC: 1
Location: 46132..47097

Top 3 Functional Annotations

Value Algorithm Source
ribose ABC transporter permease n=1 Tax=Rhodococcus opacus RepID=UPI00029CD4C5 similarity UNIREF
DB: UNIREF100
  • Identity: 44.7
  • Coverage: 320.0
  • Bit_score: 278
  • Evalue 7.70e-72
putative ABC transporter permease protein yphD similarity KEGG
DB: KEGG
  • Identity: 45.6
  • Coverage: 296.0
  • Bit_score: 269
  • Evalue 7.80e-70
Putative ABC transporter permease protein yphD {ECO:0000313|EMBL:AHK34258.1}; TaxID=543736 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus.;" source="Rhodococcus opacus PD630.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 45.6
  • Coverage: 296.0
  • Bit_score: 269
  • Evalue 3.90e-69

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Taxonomy

Rhodococcus opacus → Rhodococcus → Corynebacteriales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 966
ATGCTGGCCCTCACCCAATCGACATCGCCGCCGGGACGGTCCGCCCGCATCGTGCCGTTGGCGCTGATCGCCGCGGCGATCGTCCTGCTGGTGCTGGCGGCGCGCTGGACCACCCCGGCCTTCGCCACGGTCGACAATGCCTTCGTCATCGTCCGCGCCGCTTCCATCACCGGCATCGTGGCGATCGGCATGAGCTTCGTGACCATCTCCGGCAACCTGTTCGCCCTGTCCGCCAGCCAGCTCGCCGCGCTGCTGGCCGTGATCTTCGCCCTGGCGACGCAGGCGCTGGGCTTTGCCGGCGGCGCGGCCGCGACCCTGGCCATCGCGGCGGCGGCCGGCATCGCCCAGGGGCTGGCGATCACCGTCATCGGCAACCCGATCGTCACCACGCTCGCCTTCGGCGCCGTCTTCCGCGGCCTCGCCTCGCTGGTCAGCGGCAACGGCATCGTGCGGATCGACAGCGCGGCGGCGAGCTGGTTCGGCACGGCCCGCCCGCTCGGCATCCCGACCCAGAGCTGGGCCTTCGCGGCGATCGCGCTCTGCGGCTGGTTCCTGATCCGCAGGGCCCGCATCGGCCGGCTCCTGGTGCTCTCCGGCGCCAACCGGGCGGCGGCGATCGCCAGCGGGCTCAGCGTCGGCGCCGCCACCGTCGCGGCCATGACCCTGCTCTGCCTCGGGAGCGCCATCGTCGCGATCTTCACCGTCGCGCAGTTCGCGCAGGCCAAGGCCGATCTCTTCACCGGCACCGATTTCGACTATATCGCCGCCGTCCTCGTCGGCGGCATCGCGCTCCGGGGCGGGCAGGGCTCGCCGCTGCAGGCGGCCTTCGGCGCCGTCCTGATCGCGCTCCTGCAGAACTTCATGCTGCTCAACGGCCTCAGCGCCGGTGTCCGGATGACGATCGTCGGCGGGCTGGTCGTCGTGGCGACCTGCGCCTTCCATCTCCTGCAGGGGAGGGCGCGATGA
PROTEIN sequence
Length: 322
MLALTQSTSPPGRSARIVPLALIAAAIVLLVLAARWTTPAFATVDNAFVIVRAASITGIVAIGMSFVTISGNLFALSASQLAALLAVIFALATQALGFAGGAAATLAIAAAAGIAQGLAITVIGNPIVTTLAFGAVFRGLASLVSGNGIVRIDSAAASWFGTARPLGIPTQSWAFAAIALCGWFLIRRARIGRLLVLSGANRAAAIASGLSVGAATVAAMTLLCLGSAIVAIFTVAQFAQAKADLFTGTDFDYIAAVLVGGIALRGGQGSPLQAAFGAVLIALLQNFMLLNGLSAGVRMTIVGGLVVVATCAFHLLQGRAR*