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berkeley_reactor_200306_biofilm_scaffold_7733_42

Organism: 2019_SCN_bioreactor_200211_biofilm_Rhizobiales_70_15

near complete RP 48 / 55 BSCG 46 / 51 ASCG 10 / 38 MC: 1
Location: 47094..48071

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Rhodococcus sp. 29MFTsu3.1 RepID=UPI0003788797 similarity UNIREF
DB: UNIREF100
  • Identity: 45.4
  • Coverage: 326.0
  • Bit_score: 279
  • Evalue 3.50e-72
Ribose transport system permease protein rbsC similarity KEGG
DB: KEGG
  • Identity: 48.3
  • Coverage: 319.0
  • Bit_score: 283
  • Evalue 4.00e-74
Ribose transport system permease protein rbsC {ECO:0000313|EMBL:AHK34257.1}; TaxID=543736 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus.;" source="Rhodococcus opacus PD630.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 48.3
  • Coverage: 319.0
  • Bit_score: 283
  • Evalue 2.00e-73

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Taxonomy

Rhodococcus opacus → Rhodococcus → Corynebacteriales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 978
ATGATGGCCTCGCCCCAGGCCCGCGACCTCCTGGCCCGCGCCGCGCTGATGGTCGCGGTCTACGCGATCTTCGCCGCGATGCTGCCGACCTACACCTCGCTCAAGGGCGGCGCGGCGCTGCTCGATGGCGCCGTGCTCACCGGGCTGATCGCCCTCGGCGTCGGGCTGACGATGATCGCCGGCGAGATGGACCTGTCGGTCGGCTCGATGGCGGCGCTGTGCGGCGTCATCGCGGTCAAGCTCGCGCCGTCGGCCGGCCCGATGCCGGCGATCCTGGCCGTGGCCGCCTTCGCCGCCGGCCTCGGCGCGCTGCAGGGGCTGGCGATCGCCTGGCTGCGCATCAACTCGATGATCTTCACCATCGGCACGCTGATCGGCCTGCGCGGCATCACCCTGATCGCCTCGGGCGAGACGACCGTGCTGATCCCGTTCGACCGGCTGGCGATGACGGACGGCTTCGCCGCCCGCTTCCTGGTCTTCTCGCCGCTCAGCCTGACGCTGCTCGCCGCGGCGCTGGCCGTCGGGCTGTTCGCCAACCGGACGCTGTGGGGCCGCGAGCTCTATGCGATCGGCGGCGGGCGGGCCGAGGCGCGCGCCGCCGGCGTGTCGATCCGCCGGCCGATCGTGCTCGCCTTCGCCCTGTCCGCCGGCCTGGCCGGGCTGGGCGGCGCCCTCCTGTCGTTGCGCTCCGGCAGCGCCAGCCCGCTCGGCTTCGAGGCGGTGCTGCTGGAGGCCGTCGCCGCCTGCCTGATCGGCGGCGTCGCCCTGCAGGGCGGGCGTGGCAGCATCCCCGGCATCCTGTGCGGGCTGTTCGCCCTGCGCTTCCTGATCAGCGGCATCGGCGGCATGGGTGCGCCTTTCTGGGCCCAGAGCCTTGCAACCGGCGCGCTGCTGATCATTGTGATCGTCGTCGAGGCCCTGTCCCGGGCCATCGTCGCCCGGCGGGCGCTGGCGCGCCGCGGCGCCTCCGCCACCTGA
PROTEIN sequence
Length: 326
MMASPQARDLLARAALMVAVYAIFAAMLPTYTSLKGGAALLDGAVLTGLIALGVGLTMIAGEMDLSVGSMAALCGVIAVKLAPSAGPMPAILAVAAFAAGLGALQGLAIAWLRINSMIFTIGTLIGLRGITLIASGETTVLIPFDRLAMTDGFAARFLVFSPLSLTLLAAALAVGLFANRTLWGRELYAIGGGRAEARAAGVSIRRPIVLAFALSAGLAGLGGALLSLRSGSASPLGFEAVLLEAVAACLIGGVALQGGRGSIPGILCGLFALRFLISGIGGMGAPFWAQSLATGALLIIVIVVEALSRAIVARRALARRGASAT*