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berkeley_reactor_200306_biofilm_scaffold_7733_43

Organism: 2019_SCN_bioreactor_200211_biofilm_Rhizobiales_70_15

near complete RP 48 / 55 BSCG 46 / 51 ASCG 10 / 38 MC: 1
Location: 48080..49015

Top 3 Functional Annotations

Value Algorithm Source
Putative cyclase n=1 Tax=Bradyrhizobium sp. STM 3809 RepID=H0T9H8_9BRAD similarity UNIREF
DB: UNIREF100
  • Identity: 41.2
  • Coverage: 301.0
  • Bit_score: 237
  • Evalue 1.50e-59
Cyclase {ECO:0000313|EMBL:KJB94517.1}; TaxID=1385368 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Skermanella.;" source="Skermanella aerolata KACC 11604.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 40.6
  • Coverage: 310.0
  • Bit_score: 240
  • Evalue 1.90e-60
cyclase similarity KEGG
DB: KEGG
  • Identity: 40.5
  • Coverage: 301.0
  • Bit_score: 234
  • Evalue 3.50e-59

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Taxonomy

Skermanella aerolata → Skermanella → Rhodospirillales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 936
ATGTCCGACGACACCAATCCCGCCTTGGGCGAAGCCTGGTTTCCCTCGGCCTGGGGGGCCGGCGACCAGCGCGGCAACGGCAATCTGCAGGGGCCGGACAAGGTCAAGGCGGCGATCGGGCTGATCCGCACCGGCGAGACCGTCAGCCTCGGCTTCCCCTATTCGACGGCGATGCCGCTGTCGCCCGGCCGGACCTTCGGCCTGAAGCTGCCCGGCGGCCCGACGGGCGGCCCCGAGGGGCGCCGCAGCCGGACGGTGTGGAACGACGACTTCATCGCCACCGAGATCGGCCAGATCGGCACCCACATGGACGGGCTCGGCCATGTCGGGCACCAGTTCGGCGGCTGCGGCCATTGCCAGACGCTGCTCTACAACGGCAACCGCCTCGCCGACATCTGGACGCCCTACGGCCTGAAGCGGCTCGGCATCGAGCAGGCGCCGATCTTCTTCACCCGGGGCGTGCTGCTCGACGTGCAGGGGCTGTTCGGCGCCCCGCTCGACCCGGGATTCGAGATCACGCCGGACCATCTCCTTGCCTGCCTGGAGCGCGAGGGCCTCGACCCCGCGGCGTGGCTGGAGCCCGGCGACGTCGTGCTGATCCGCACCGGGCACGGCTCGCGCTTCCACGCCGAGGCTGCGACCTGGTACGACGGCGCGCCGGGGCTGGGCCTGGCCGCGGCGGAGTTCCTGTCGGCGCTGCGGCCCTCCGTGGTCGGGGCGGACAATTTCGCCGTCGACGTCATGCCGCCCGTCGATCCCGAGATGGTGCTGCCCTGCCACCAGCACCTGATCATGCGGCACGGGATCCACCTGCACGAAGGCATGAACCTCGACCCGCTGGCGGAGAAGCGACGCTTCACCTTCGCCTATGTCTTCGCGCCGACGCCGATCGTCGGCGCCACGGGATCGCCCGGGACGCCGTTCGCCGTGCTCTGA
PROTEIN sequence
Length: 312
MSDDTNPALGEAWFPSAWGAGDQRGNGNLQGPDKVKAAIGLIRTGETVSLGFPYSTAMPLSPGRTFGLKLPGGPTGGPEGRRSRTVWNDDFIATEIGQIGTHMDGLGHVGHQFGGCGHCQTLLYNGNRLADIWTPYGLKRLGIEQAPIFFTRGVLLDVQGLFGAPLDPGFEITPDHLLACLEREGLDPAAWLEPGDVVLIRTGHGSRFHAEAATWYDGAPGLGLAAAEFLSALRPSVVGADNFAVDVMPPVDPEMVLPCHQHLIMRHGIHLHEGMNLDPLAEKRRFTFAYVFAPTPIVGATGSPGTPFAVL*