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berkeley_reactor_200306_biofilm_scaffold_7733_45

Organism: 2019_SCN_bioreactor_200211_biofilm_Rhizobiales_70_15

near complete RP 48 / 55 BSCG 46 / 51 ASCG 10 / 38 MC: 1
Location: 50659..53823

Top 3 Functional Annotations

Value Algorithm Source
Hydrophobe/amphiphile efflux-1 (HAE1) family transporter n=1 Tax=Microvirga sp. WSM3557 RepID=I4YVA4_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 76.0
  • Coverage: 1059.0
  • Bit_score: 1575
  • Evalue 0.0
Hydrophobe/amphiphile efflux-1 (HAE1) family transporter {ECO:0000313|EMBL:EIM27896.1}; Flags: Precursor;; TaxID=864069 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Microvirga.;" source="Microvirga lotononidis.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 76.0
  • Coverage: 1059.0
  • Bit_score: 1575
  • Evalue 0.0
mexF2; multidrug-efflux system similarity KEGG
DB: KEGG
  • Identity: 69.3
  • Coverage: 1057.0
  • Bit_score: 1469
  • Evalue 0.0

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Taxonomy

Microvirga lotononidis → Microvirga → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 3165
ATGCGGTTCGCGCACTTCTTCGTCGACCGGCCGATCTTCGCGGTGGTGCTGGCCATCGTCATCTCGCTGGTCGGCACCATCGCCTTCCTCGGCCTGCCGGTGGCGCAATATCCCGAGATCGCCCCGCCGACCATCGTCATCCGCGCCTCCTATCCCGGCGCCAATGCCGAGACCGTGGCCGCCACCGTCGCCACGCCGCTGGAGGAGCAGATCAACGGCGTGGAGAACATGCTCTACATGTCCTCCTATGCCAGCAGCGACGGCAACCTGTCGCTGACCATCACCTTCAAGCTCGGCACCGACCTCGACCAGGCGCAGGTGCTGGTGCAGAACCGCGTCGCCATCGCCACGCCGCGCCTGCCGGACGACGTGCGCAGCCTCGGCGTCACCACGCTGAAGAGCTCGCCCGACCTGATGATGGTCGTGCACATGTTCTCGCCGGACAACCGCTACGACCAGCTCTACATCTCCAACTACGCCCGCAACAATGTGCGCGACGAGTTGCTGCGCCTCGACGGCGTCGGCGACCTCACCATCTTCGGCGAGCGCCAGTACAGCCTGCGCGTCTGGCTCGACCCCGACAGGCTCGCCACCTTCGGCCTGACCTCCTCGGACGTGGTCGCCGCCATCCGGGCGCAGAACGTCCAGGTCTCGGCCGGTGCCCTCGGCCAGGAGCCGACCCCGGCCGACAGCGCCTTCCGCATCACCATCAACACGCAGGGCCGCTTCCAGGACGCGACGCAGTTCCGCCGGATCATCGTGCGCTCGACCTCCGACGGGCGCCTGGTGCGCCTGCAGGACGTCGCCAGGGTCGAGCTCGGCGCCCAGGACTACGTCACCAATTCCTATCTCGACGGCAAGCCCGCCGTGGCGCTCGCCATCTTCCAGCGGCCCAACACCAACGCCCTGGACGCCGCCGCCGACATCATCAAGACGATGGAGGAGCTGAAGAAGTCCTTCCCGCCGGGCGTCGCCTACGACATCGTCTACAACCCGACCCAGTTCATCGCCGAGTCGGTCAACGCCGTCTACCACACGCTGGGCGAGGCAGTGGTGCTGGTGGTGCTGGTGATCCTGGTCTTCCTGCAGAGCTGGCGCACGGCCCTGATCCCGATCGTCGCCATCCCCGTGTCGCTGATCGGCACCTGCGCCATCATGGCCGCCTTCGGCTTCTCGCTGAACAACCTCACCCTCTTCGGCATGGTGCTGGCCATCGGCATCGTCGTCGACGACGCCATCGTCGTGGTCGAGAACATCGAGCGCAACATCGGCGAGGGCATGTCGCCGCGCGATGCGGCGCACGAGACCATGGACGAGGTCGGCACGGCCGTCATCGCCATCGCCCTGGTTCTGGGCGCGGTGTTCATTCCCACCGCCTTCATCCCCGGGCTCTCCGGCCAGTTCTATCGCCAGTTCGCCCTGACCATCGCGGTCTCGACCTTCATCTCGGCCTTCCTGTCGCTGACGCTGTCGCCGGCTCTCTCGGCGATTCTGCTGAAGCCGCACCATGCCAGGACGCCGAAGACCATTGTCGGGCGGATCGGCAACCGGCTCGCGGGCGGCTTCAACCGCGGCTTCGACCGGATGTCCAGCGGCTATGCCGGCGCGGTGCGCGGCATCGTCCGGCGCAAGCTGATCGCCCTGCCGATCTATGCCGGGCTGCTCGCCGGCACGGTGTGGATCGCCCAGGCGGTGCCGCGCGGCTTCATCCCGCAGCTCGACCAGGGTTATGCCATCATCGTCGCCCAGCTGCCCGACGGCGCCTCGCTCGCCCGCACCGACGCCGTCACCAAGCGCATCACCGAGATCGCCCTGCAGACGCCGGGTATCGAGCACTCCGTCGCCTTCGCGGGCTTCTCCGGCGCGACCTTCACCAACGCCTCCAATGCCGCGGCCGTGTTCGTGCCGTTCAAGCCCTTCGACGAGCGGGTGAAGGAGGGCCTGACCGCCGACAAGATCATCAAGGACCTGTTCGGCCGCATGCAGGCGATCGAGGAGGCCTTCATCATCGCCATCCCGCCGCCGCCGGTCCGCGGCATCGGCAACAGCGGCGGCTTCAAGATGCAGGTGCAGGAGCGGATCGGGCCGGACGTGCGCCGCATCCTGGCCTCGACCTACGAGCTGATGGGCAAGGCCCGCGCCAATCCCAAGCTCGCCGGCGTGTTCACCACCTTCACGGCCAGCGCGCCGCAGATCTTCCTGGCCATCGACCGGCAGAAGGCCGAGCTGCTCAACGTGCCGATCAGCAACATCTTCGACACGCTGCAGCAGAATCTCGGCACCGCCTATGTCAACGACTTCAACGCCTTCGGCCGCGTCTACCAGGTCAGGGCCCAGGCCGAGGCGCGCTTCCGCTCCGACACCGAGCAGATCGCCCGCCTCCGTGTGCGCTCGGCCAGCGGCGCCCTGGTGCCGCTCGGCACCCTGGTCGACATCCGCGACGTGTCCGGGCCGGACCTGATCCAGCGCTACAACATGTACACATCCGTGCCGCTGCAGGGGAATCCGGCACCGGGCGTCTCCACGGGCGAGGCGCTCGCCACCATGGAGCAGCTGGCGCAGGAGACCCTGCCCCAGGGCGCGACCTTCCAATGGACCGAGCTCGCCTTCCAGGAGCGCTCGACCGGCAACACGGCGATCTTCATCTTCGCCCTGTCGGTGCTGTTCGTCTTCCTGGTGCTGGCCGCCCAGTACGAGAGCTGGTCGCTGCCGCTCGCCATCATCCTGATCGTGCCGATGGCGGTGCTCTCGGCCCTCGTCGGCGTGATGCTGCGCGGCATGGACAACAACATCCTGACCCAGATCGGCCTGATCGTGCTGGTGGGCCTGGCGGCGAAGAACGCCATCCTGATCGTCGAGTTCGCCCGCGAGGCGGAGGCGCGCGACCACAAGGATCCGGTCGCGGCGGTGGTGGAGGCCTGCCGGCTGCGCCTCAGGCCGATCCTGATGACCGCCTTCGCCTTCATCCTCGGCGTGGTGCCGCTGGTCATCGCCGTCGGTCCCGGCGCCGAGATGCGCCAGGCGCTCGGCACGGCGGTGTTCTTCGGCATGAGCGGCGTCACCGTGTTCGGCCTGTTCCTGACGCCGGTGTTCTACGTGGTGCTGCGGGTGATCGCCATGCGCCTCGCCCGGCCGCGCAAGCCGGCGGCGGGGACCGCGACCTGA
PROTEIN sequence
Length: 1055
MRFAHFFVDRPIFAVVLAIVISLVGTIAFLGLPVAQYPEIAPPTIVIRASYPGANAETVAATVATPLEEQINGVENMLYMSSYASSDGNLSLTITFKLGTDLDQAQVLVQNRVAIATPRLPDDVRSLGVTTLKSSPDLMMVVHMFSPDNRYDQLYISNYARNNVRDELLRLDGVGDLTIFGERQYSLRVWLDPDRLATFGLTSSDVVAAIRAQNVQVSAGALGQEPTPADSAFRITINTQGRFQDATQFRRIIVRSTSDGRLVRLQDVARVELGAQDYVTNSYLDGKPAVALAIFQRPNTNALDAAADIIKTMEELKKSFPPGVAYDIVYNPTQFIAESVNAVYHTLGEAVVLVVLVILVFLQSWRTALIPIVAIPVSLIGTCAIMAAFGFSLNNLTLFGMVLAIGIVVDDAIVVVENIERNIGEGMSPRDAAHETMDEVGTAVIAIALVLGAVFIPTAFIPGLSGQFYRQFALTIAVSTFISAFLSLTLSPALSAILLKPHHARTPKTIVGRIGNRLAGGFNRGFDRMSSGYAGAVRGIVRRKLIALPIYAGLLAGTVWIAQAVPRGFIPQLDQGYAIIVAQLPDGASLARTDAVTKRITEIALQTPGIEHSVAFAGFSGATFTNASNAAAVFVPFKPFDERVKEGLTADKIIKDLFGRMQAIEEAFIIAIPPPPVRGIGNSGGFKMQVQERIGPDVRRILASTYELMGKARANPKLAGVFTTFTASAPQIFLAIDRQKAELLNVPISNIFDTLQQNLGTAYVNDFNAFGRVYQVRAQAEARFRSDTEQIARLRVRSASGALVPLGTLVDIRDVSGPDLIQRYNMYTSVPLQGNPAPGVSTGEALATMEQLAQETLPQGATFQWTELAFQERSTGNTAIFIFALSVLFVFLVLAAQYESWSLPLAIILIVPMAVLSALVGVMLRGMDNNILTQIGLIVLVGLAAKNAILIVEFAREAEARDHKDPVAAVVEACRLRLRPILMTAFAFILGVVPLVIAVGPGAEMRQALGTAVFFGMSGVTVFGLFLTPVFYVVLRVIAMRLARPRKPAAGTAT*