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berkeley_reactor_200306_biofilm_scaffold_10611_60

Organism: 2019_SCN_bioreactor_200211_biofilm_Rhizobiales_70_15

near complete RP 48 / 55 BSCG 46 / 51 ASCG 10 / 38 MC: 1
Location: comp(60820..61698)

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Arthrobacter sp. 161MFSha2.1 RepID=UPI0003757072 similarity UNIREF
DB: UNIREF100
  • Identity: 33.6
  • Coverage: 274.0
  • Bit_score: 194
  • Evalue 1.00e-46
Uncharacterized protein {ECO:0000313|EMBL:KDR86598.1}; TaxID=1315272 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium; Agrobacterium tumefaciens complex.;" source="Agrobacterium tumefaciens GW4.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 65.2
  • Coverage: 279.0
  • Bit_score: 387
  • Evalue 8.90e-105
ABC transporter permease similarity KEGG
DB: KEGG
  • Identity: 32.8
  • Coverage: 274.0
  • Bit_score: 192
  • Evalue 1.40e-46

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Taxonomy

Agrobacterium tumefaciens → Agrobacterium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 879
ATGGCGACGGGCGGCCGCCGGGCGCGGCACCGCCCCATGCCGCTCCTCTGGTTCGTGCCGGTCCTGGCCCTGCTCGGGCTGGTCACGATCTACCCCGCCGCCTTCGTCGTCTGGATGAGCTTCCAGAAGACCAATTATTTCCAGCTGCAGGGCTTCGTCGGGCTCAGCAACTATGTCGACGTGCTCGGATCGGATTCGTTCTGGAGCGTGGCGACGATCTCGCTGGTCTATCTCGCCGGCTCGCTCGTCCTCTCGCTCGCCGTCGGCGTGGCCGTCGCGCTCCTGTTCAACGCCATCGGCACGACCGGCGGCGTCCTGCGCGTCCTCACCCTGTTTCCCTGGACGCTGTCCATGGCGGTGGTCGGCTCGATCTGGCTGTGGATGCTGAACCCGTCCTTCGGTCCGGTGGCCTATTTCCTCGGCGAGGCCGGCCTCTCGCCGGGCCTGATGCTGGGCGATCCCGATCTGGCCCTGGCCCTGACCATCCTGGTCACGGCCTGGTGGTCGTTCCCCTATGTCATGGTCATGGTCACCGCCACGATCCAGTCGATCCCCGCCGAGCTCTACGAGGCGATCGCCATCGACGGCGGCAATGCCTGGCACCGATTCCGCTATGTGACGCTGCCGCATCTCGTGCCGACGCTCGGCAGCACCGGGCTGAACCTCGCCATCATCTACCTCACGCTGGTGACGCTGCTGATCGTGCTGACCGGCGGCGGCCCGCTCGACGCCACCACCACGCTCAGCCTCGAGATCTTCCGCGGCACGGTGCAGAGCGTCGACATCGGCCCGTCCGCCGTCCTGTCGGTCGTCGTGCTGGCGATCAACATCGTCCTGGGGGCGATCTACACGCGCCTCACCGGGCGGGTCACGGGATAG
PROTEIN sequence
Length: 293
MATGGRRARHRPMPLLWFVPVLALLGLVTIYPAAFVVWMSFQKTNYFQLQGFVGLSNYVDVLGSDSFWSVATISLVYLAGSLVLSLAVGVAVALLFNAIGTTGGVLRVLTLFPWTLSMAVVGSIWLWMLNPSFGPVAYFLGEAGLSPGLMLGDPDLALALTILVTAWWSFPYVMVMVTATIQSIPAELYEAIAIDGGNAWHRFRYVTLPHLVPTLGSTGLNLAIIYLTLVTLLIVLTGGGPLDATTTLSLEIFRGTVQSVDIGPSAVLSVVVLAINIVLGAIYTRLTGRVTG*