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berkeley_reactor_200306_biofilm_scaffold_10611_61

Organism: 2019_SCN_bioreactor_200211_biofilm_Rhizobiales_70_15

near complete RP 48 / 55 BSCG 46 / 51 ASCG 10 / 38 MC: 1
Location: comp(61823..62650)

Top 3 Functional Annotations

Value Algorithm Source
UPI0003CF76C5 related cluster n=1 Tax=unknown RepID=UPI0003CF76C5 similarity UNIREF
DB: UNIREF100
  • Identity: 53.9
  • Coverage: 256.0
  • Bit_score: 261
  • Evalue 8.40e-67
Uncharacterized protein {ECO:0000313|EMBL:ESX84285.1}; TaxID=1287281 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNJC405B00.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 53.9
  • Coverage: 256.0
  • Bit_score: 261
  • Evalue 1.20e-66
iclR; transcriptional regulator, IclR family similarity KEGG
DB: KEGG
  • Identity: 51.6
  • Coverage: 252.0
  • Bit_score: 248
  • Evalue 1.60e-63

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Taxonomy

Mesorhizobium sp. LNJC405B00 → Mesorhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 828
ATGCGTCTTGTCAAATCCCTCGTCGAGCGCTGCTTCGATCTGATCACGCTCCTGAGCGAGCAGGCCGAGACGCTGCCGCTCGGCGAGATCGCCCGGCGCCTCGACCTGCCCAAGAGCGCCACCCACCGCCTGCTGGCCACCTTCTGCGAGCTCGGCTGGGCCGAGCAGGATCCCGCGACGGGGTTCTACCGGCTGTCCCTGCGCCTGGCGATCACCGGGCAGCGGCTGCTGGTCGGCACCCGCATTCCCGACATCTGCCAGCCGGTGCTGGACGAGCTCGCCCGCGCCACGGAAAGCCTCGGCCGCCTCGCCATCGCCGGCGCCGACGGCCTGACCTGGATCGCCCATTCCCAGGGCGCCCGCAGCGGCCTGGTCTACCAGCCCGAGCTGGTGGCGCGCGTCCCGCTGCACGCCACCGCCAATGGCAAGGCCTGGCTCGCCACCCTTCCGCGCAACGAGGCGCTGCGCCGCGCCACCGAGAGCGGCCTCGGCCAGCCCGGCATCGGCGGCCCGCGCGCCATCCGCACCCGCGAGACCTTCTCGGCCGCCCTCGACGAGACCGCCGAGCGCGGCTGGGCCATCGCCCAGGAGGAAGCCGAGCCGGGCGTCGGCGCGATCGCCGCGCCGATCTTCCAGGCCGGCATCGCCGTCGGCACGGTCAGCATCGCCGGCCCGATCCACCGGTTCGCCGAGCCTGCCCTCGCCCGGATCGCGGCGCAGGTCTGCGACACCGCCCGGCGCCTGTCGGAGGTCTGGCCCTATCGCGTCTCGCTCGTCGGCCCGTCCTCGCCCGAGCCGGCCGTTCCGGTGGCGGTTGACCAGCCTTGA
PROTEIN sequence
Length: 276
MRLVKSLVERCFDLITLLSEQAETLPLGEIARRLDLPKSATHRLLATFCELGWAEQDPATGFYRLSLRLAITGQRLLVGTRIPDICQPVLDELARATESLGRLAIAGADGLTWIAHSQGARSGLVYQPELVARVPLHATANGKAWLATLPRNEALRRATESGLGQPGIGGPRAIRTRETFSAALDETAERGWAIAQEEAEPGVGAIAAPIFQAGIAVGTVSIAGPIHRFAEPALARIAAQVCDTARRLSEVWPYRVSLVGPSSPEPAVPVAVDQP*