ggKbase home page

berkeley_reactor_200306_biofilm_scaffold_10611_72

Organism: 2019_SCN_bioreactor_200211_biofilm_Rhizobiales_70_15

near complete RP 48 / 55 BSCG 46 / 51 ASCG 10 / 38 MC: 1
Location: 73223..73606

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator, XRE family n=1 Tax=Paracoccus denitrificans (strain Pd 1222) RepID=A1AYN5_PARDP similarity UNIREF
DB: UNIREF100
  • Identity: 58.1
  • Coverage: 124.0
  • Bit_score: 166
  • Evalue 1.70e-38
XRE family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 58.1
  • Coverage: 124.0
  • Bit_score: 166
  • Evalue 4.80e-39
Transcriptional regulator, XRE family {ECO:0000313|EMBL:ABL68379.1}; TaxID=318586 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Paracoccus.;" source="Paracoccus denitrificans (strain Pd 1222).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 58.1
  • Coverage: 124.0
  • Bit_score: 166
  • Evalue 2.40e-38

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Paracoccus denitrificans → Paracoccus → Rhodobacterales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 384
ATGGACAACATCCGACCGATCCGCACCGAGGCGGACTATGAATGGGCTCTCGCGGAAGTGGCACCGTATTTCGACAGGGAGCCGGAGCCTGGATCACCCGAGAGCGACCGCTTTCTGGTCCTGGTGGATCTGATCTCCGCTTATGAGGAGAAGCACTACCCCATGCCCGATCCCGACCCGATCGACATGATACGCCATGTCATGGAGCAGAAGGGCTATGCTCAGAAGGATTTCGCCGACCTGCTGGGCTCCAAGTCCAGAGCTTCCGAAATCCTGAAGCGCAAGCGCCCGCTCACCATGAACCAGGCCTACAAGCTCAATCGCGAATGGGGGGTCCCGGCCGAAGCGCTGATCAGGCCGTACCACACGGGAGATGCCGCGTAG
PROTEIN sequence
Length: 128
MDNIRPIRTEADYEWALAEVAPYFDREPEPGSPESDRFLVLVDLISAYEEKHYPMPDPDPIDMIRHVMEQKGYAQKDFADLLGSKSRASEILKRKRPLTMNQAYKLNREWGVPAEALIRPYHTGDAA*