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berkeley_reactor_200306_biofilm_scaffold_10611_73

Organism: 2019_SCN_bioreactor_200211_biofilm_Rhizobiales_70_15

near complete RP 48 / 55 BSCG 46 / 51 ASCG 10 / 38 MC: 1
Location: comp(73665..76091)

Top 3 Functional Annotations

Value Algorithm Source
Dimethylglycine dehydrogenase {ECO:0000313|EMBL:EYR80876.1}; EC=1.5.8.4 {ECO:0000313|EMBL:EYR80876.1};; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 66.9
  • Coverage: 810.0
  • Bit_score: 1134
  • Evalue 0.0
Sarcosine dehydrogenase n=1 Tax=Labrenzia aggregata IAM 12614 RepID=A0NN72_9RHOB similarity UNIREF
DB: UNIREF100
  • Identity: 64.6
  • Coverage: 810.0
  • Bit_score: 1112
  • Evalue 0.0
dimethylglycine dehydrogenase precursor similarity KEGG
DB: KEGG
  • Identity: 66.2
  • Coverage: 810.0
  • Bit_score: 1112
  • Evalue 0.0

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Taxonomy

Shinella sp. DD12 → Shinella → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 2427
ATGAGATCCCATGCGCGTGTCGTCGTCATCGGGGGCGGCGTCGTCGGCTGCTCCGTGCTCTACCACCTCGCCCGCGCCGGCTGGACCGACGTGATGCTGATCGAGCGGGCCGAGCTCACCGCCGGCTCCACCTGGCATGCGGCGGGCGGCTTCCACACGCTCAACGGCGACCCCAACGTCGCCAAGCTGCAGCAATACACCGTCGAGCTCTACAAGGAGATCGAAGCGCTGTCGGGTGAGAGCTGCGGCCTGCACCTCACCGGCGGCGTCATGCTCGCCGGCACCAAGGAGCGGATGGACTGGCTCAGGATGGCGCACGCCAAGGGCCGCTATCTCGGCATGCATACCGAGATCATCTCCGCCGCCGAGGCCAAGGCGCTGCTGCCCCTGATGGAGGAGAAGGAGTTCGCCGGCGCGATGTGGGACCCGTTCGAGGGCCATCTCGACCCCTACGGCACCACCCATGCCTATGCCAAGTCGGCCCGGATCAAGGGCGCCGAGATCGTGCTGCGCAACCGCATCACCGACCTCGTGCAGCGCGAGGACGGCAGCTGGGACGTCGTCACCGAGCAGGGCACCGTGCATGCCGAGCACGTGGTCAATTGCGGCGGGCTGTGGGCGCGCGAGGTCGGCCGCATGGTCGGGCTGGAGCTGCCGGTGCTCGCCATGGAGCATATGTACATGCTCACCGAGGACATGCCGGAGGTCGCCGAGATCAACCGGACGACCGGCAAGGAGATGATCACCGCGCTCGATTTCGAGGGCGAGATCTACATGCGCCAGGAACGCGGCGGCATCCTGCTCGGCACCTACGAGCACGATTGCCGGCCCTGGTCGGAAAAGGCCACGCCGTGGGATTTCGGCCAGAACCTCCTGGAGCCCGACCTCGACCGCATCGCGCCGCAGCTCGAGATCGGCTTCCGCCACTTCCCGGCCTTCGAGCGGGCCGGCATCCGCAAGATCATCAACGGCCCCTTCACCTTCGCCCCGGATGGCAACCCGCTGGTCGGCCCGATCCGCGGCCTCCGCAATTTCTGGGTCGCCTGCGGCGTCATGGCCGGCTTCTCCCAGGGCGGCGGCGTCGGCCTCGCCCTCTCCAACTGGATGGTCGAGGGCGATCCGGGCTTCGACGTCTGGGGCATGGACGTCGCCCGCTACGGCGACTGGACCACGCTCGGCCACACCAACGCCAAGGTGCGCGAGAACTACGCCCGGCGCTTCCGCATCCGCTTCCCCAACGAGGAATTGCCGGCGGCGCGCCCCTTCCGCACCACGCCGGTCTATGACCGCCTCGCCGAGCGCAACGCCGTGTTCGGCGACATGGTCGGGCTGGAGCACGCGCTCTGGTTCGCCCCGTCCAAGGCGCAGGCGAAGGACGATTTCTCCTTCCGCCGCTCCAGCGACTTTGCCCATGTCGGCGCCGAATCCAAGGCGGTGCGCGAGGGCGTCGGCCTCCTGGAGATCTCCAACTTCGCCAAATACGAGGTGACCGGGCCGGGCGCCGAAGCCTGGTTGGAGACGCTGCTGCCCAACCGCCTGCCGGCCGAGGGCCGCATGGTGCTGACGCCGATGCTGAACGAGAAGGGCATGCTGATCGGCGACTTCACCCTGGCGCGCGAGACGGCGGACCGCTTCCTGATCCTCGGCTCGGGCCTGGCCGAGCAATACCATATGCGCTGGTTCCTGAGCCGGCTACCGACCAGCGGCGTCGCCGTGCGCAGCCTCGGCCTCGACCTCACGGGCCTGCAGATCGCCGGGCCGAAATCCCGCGACCTGCTGGCGCGCCTCGCCGGCCGGGACGTCTCGAAACAGGCCTTCCCCTTCATGGCGATCGACCGCTTCGACGTCGGCGCCATCCCGGCCGTGGTCGGGCGCGTCACCTATACCGGCGACCTCGGCTACGAGCTCTGGGTCAAGGCCGAGCACCAGCGGGCGCTGTTCGATCTTTTGGAGCGCACGGGCGAGGACCTGGACATCACTCTCTTCGGCGCCCGGGCGCTGAACTCGCTGCGGCTGGAGAAGAGCTTCGGCTCCTGGTCGCGCGAATACCGGCCGATCTACACGCCGTGGGAGGCGGGGCTCGAGCGCTTCGTCTCGACCCAGAAGCCCGCCTTCGTCGGCCGCGACGCCATGCTGCGGGCCCGCGACCAGGGCCCGGTCCAGCGCCTCGCCACCTTCATCGTCGACGCGCATGACGCCGACGTCATCGGCGACGAGCCGATCTGGCGCGACGGCACGGTGGTCGGCTGGGTGACCTCGGGCGGCTACGCCCATTGGTCGCAGGCCTCCGTCGCCCTCGGCTATGTCAAGGCCGAGGCCTTCGACCCCGCCGCCCCCTACGAGATCGAGATCATCGGCGAGCGCCGTCCGGCGCGCATGGCGGCCGAGCCGCTGTTCGACCCGAAGGGCGCGCGGATGCGGGGGTAG
PROTEIN sequence
Length: 809
MRSHARVVVIGGGVVGCSVLYHLARAGWTDVMLIERAELTAGSTWHAAGGFHTLNGDPNVAKLQQYTVELYKEIEALSGESCGLHLTGGVMLAGTKERMDWLRMAHAKGRYLGMHTEIISAAEAKALLPLMEEKEFAGAMWDPFEGHLDPYGTTHAYAKSARIKGAEIVLRNRITDLVQREDGSWDVVTEQGTVHAEHVVNCGGLWAREVGRMVGLELPVLAMEHMYMLTEDMPEVAEINRTTGKEMITALDFEGEIYMRQERGGILLGTYEHDCRPWSEKATPWDFGQNLLEPDLDRIAPQLEIGFRHFPAFERAGIRKIINGPFTFAPDGNPLVGPIRGLRNFWVACGVMAGFSQGGGVGLALSNWMVEGDPGFDVWGMDVARYGDWTTLGHTNAKVRENYARRFRIRFPNEELPAARPFRTTPVYDRLAERNAVFGDMVGLEHALWFAPSKAQAKDDFSFRRSSDFAHVGAESKAVREGVGLLEISNFAKYEVTGPGAEAWLETLLPNRLPAEGRMVLTPMLNEKGMLIGDFTLARETADRFLILGSGLAEQYHMRWFLSRLPTSGVAVRSLGLDLTGLQIAGPKSRDLLARLAGRDVSKQAFPFMAIDRFDVGAIPAVVGRVTYTGDLGYELWVKAEHQRALFDLLERTGEDLDITLFGARALNSLRLEKSFGSWSREYRPIYTPWEAGLERFVSTQKPAFVGRDAMLRARDQGPVQRLATFIVDAHDADVIGDEPIWRDGTVVGWVTSGGYAHWSQASVALGYVKAEAFDPAAPYEIEIIGERRPARMAAEPLFDPKGARMRG*