ggKbase home page

berkeley_reactor_200306_biofilm_scaffold_10611_78

Organism: 2019_SCN_bioreactor_200211_biofilm_Rhizobiales_70_15

near complete RP 48 / 55 BSCG 46 / 51 ASCG 10 / 38 MC: 1
Location: 82750..83859

Top 3 Functional Annotations

Value Algorithm Source
Enolase superfamily protein n=1 Tax=Shinella zoogloeoides DD12 RepID=V5D0H0_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 65.4
  • Coverage: 373.0
  • Bit_score: 520
  • Evalue 1.30e-144
Enolase superfamily protein {ECO:0000313|EMBL:EYR79732.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 65.4
  • Coverage: 373.0
  • Bit_score: 520
  • Evalue 1.90e-144
mandelate racemase/muconate lactonizing enzyme similarity KEGG
DB: KEGG
  • Identity: 65.3
  • Coverage: 372.0
  • Bit_score: 517
  • Evalue 1.90e-144

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Shinella sp. DD12 → Shinella → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1110
ATGAAGATCACCGGCATCGAGATCAGCCATCACCGCCTGCCGCTCGACCCGCCCTTCCATGCGAGCTGGGACACGCAGCCGCGCGTCGCCTTCGACGCCACCATCGTGCGCGTCACCACCGACGAAGGCCTCGTCGGTATCGGCTCGGGCGATACCATGACCGGCTTTGCCGGGCACGAGCGTTTCTTCGTCGGCCAGGACCCGCTGGCGATCGAGCGCCATTACCGCATCCTCACCAACATCCAGTTCCATTACGGCCGCTGCTGGCCGCTCGACCTGGCGCTGTGGGATCTCGCCGGCAAGATCACGGGGCAGCCGGTGTGGAAGCTGCTGGGCGGCCTCTCCGACCGCATCCCGGCCTATGCCTCCTCCGGCACGCTGCGCCAGCCCGAGGCGCTGGCCGATGCGGCCGAGGCCTATCTGGCGCGGGGGTTCAAGGCGCTGAAGATCCGTTTCCATCGCGGCGACTGGCGGGCCGACATCAAGGCGCTGGAAGCGGTGCGCGGGCGCATCGGCAACCGGCTCGAGCTCATGGTCGACTGCAACCAGGGCTGGCGCATGTCCTGGGACGCCTATGCGCCCTGGACCCTGAAGGAGGCTGTGCCGGTGGCGCGCGAGCTGGAGCGGCTCGGCGTCTACTGGATGGAGGAGCCGCTGCACCGGGCGGACAGGGAGGGCATGCGGCGCCTGCGCGAGATGGTCGACATCCGCATCGCCGGCGGCGAGATGACGCGCGAGCTCTCCGAGTTCCGCGATCTGATCCGCGACGGCTGCCTGGACGTGCTGCAGCCCGACGCCGCCCTGGTCGGCGGCATCACCGGCCTGCGCCGGGTGGCTGTCATGGCGCAGGAGAACAATGTCCTGTTCACGCCGCATACCTGGACCAACGGCATGGGCGTCGTCGCCAATTGCCACCTCACCGCCGGGCTCTGCGACGCGCCCTTCGTCGAGTTCCCCTACGATCCGCCGGAATGGAGCACCAAGCGCCGCGACTTCATGATGGCGACGCCGCTGGAGGTCGATGCCGACGGCATGATCGTGCTCTCCGGCGCGCCGGGCCTCGGCTATGCCCTCGACGAGGCGGTGCTGGCGAAGACGCGGATCGGGTGA
PROTEIN sequence
Length: 370
MKITGIEISHHRLPLDPPFHASWDTQPRVAFDATIVRVTTDEGLVGIGSGDTMTGFAGHERFFVGQDPLAIERHYRILTNIQFHYGRCWPLDLALWDLAGKITGQPVWKLLGGLSDRIPAYASSGTLRQPEALADAAEAYLARGFKALKIRFHRGDWRADIKALEAVRGRIGNRLELMVDCNQGWRMSWDAYAPWTLKEAVPVARELERLGVYWMEEPLHRADREGMRRLREMVDIRIAGGEMTRELSEFRDLIRDGCLDVLQPDAALVGGITGLRRVAVMAQENNVLFTPHTWTNGMGVVANCHLTAGLCDAPFVEFPYDPPEWSTKRRDFMMATPLEVDADGMIVLSGAPGLGYALDEAVLAKTRIG*