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berkeley_reactor_200306_biofilm_scaffold_10611_79

Organism: 2019_SCN_bioreactor_200211_biofilm_Rhizobiales_70_15

near complete RP 48 / 55 BSCG 46 / 51 ASCG 10 / 38 MC: 1
Location: comp(83869..84642)

Top 3 Functional Annotations

Value Algorithm Source
amino acid ABC transporter n=1 Tax=Rhizobium giardinii RepID=UPI0003812FC6 similarity UNIREF
DB: UNIREF100
  • Identity: 70.5
  • Coverage: 258.0
  • Bit_score: 370
  • Evalue 7.00e-100
amino acid ABC transporter similarity KEGG
DB: KEGG
  • Identity: 66.4
  • Coverage: 256.0
  • Bit_score: 357
  • Evalue 3.00e-96
Amino acid ABC transporter {ECO:0000313|EMBL:ACM28929.1}; TaxID=311403 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium; Agrobacterium tumefaciens complex.;" source="Agrobacterium radiobacter (strain K84 / ATCC BAA-868).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 66.4
  • Coverage: 256.0
  • Bit_score: 357
  • Evalue 1.50e-95

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Taxonomy

Agrobacterium tumefaciens → Agrobacterium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 774
ATGAAAGGATCGTTCTTGCCGGCGCTCGCCCTCGCCGTGCTGGCGGCGGCCTCGCAGGTCCGGGCCGAGCCATCCGCCCTCGCAGCCATCCGCGAGGCCGGCGTGATCCGGATCGGCACCACCGGCGACTACAAGCCCTTCACGTACCGGACGGCCGCCGGCGACCTGACAGGGGCCGATATCGACATGGCCCGCGACCTCGCCGCCCATCTCGGCGTCAGGGCGGCGTTCGTGCCCACCACCTGGAAGACCCTGCTCGACGATTTCAAGGCCGGCAAGTTCGACATGGTGGTCGGCGGCATTTCGGTGAACCCGGCACGGGCCGAGGCCGGAGACTTCTCGATTGCCACGCTCAGCGACGGCAAGCGGCCGATCGTGCGCTGCGCCGACAAGGACAGGTACGTCTCGCTCGCGGCGATCGACCAGCCCTCCGTCCACGTGGTGGTCAATCCCGGCGGCACCAACGATACGTTCGCGCACGAGCATTTCGCCAGGGCGCCGATCGAGGTCTACCCCGACAACAAGACGATCTTCGAGGAGATCGTCGCCGGCAAGGCCGACGTCATGGTCAGCGACGGCGTCGAGGTCGACCTGCAGGCGAGGCTCCATCCCGGCGTGCTCTGCCCGGCGGCGGTGACGGCCCCCTTCACCCATGACGAGAAGGCCTATCTCCTGCGGCGGGACCCGGCGCTCAAGGCGGCGGTCGACGCCTGGCTGCGGCAGGAGCTGGACGCCGGCGGCTGGCGCAAGCACCTCGACGCCGCCATGCATTGA
PROTEIN sequence
Length: 258
MKGSFLPALALAVLAAASQVRAEPSALAAIREAGVIRIGTTGDYKPFTYRTAAGDLTGADIDMARDLAAHLGVRAAFVPTTWKTLLDDFKAGKFDMVVGGISVNPARAEAGDFSIATLSDGKRPIVRCADKDRYVSLAAIDQPSVHVVVNPGGTNDTFAHEHFARAPIEVYPDNKTIFEEIVAGKADVMVSDGVEVDLQARLHPGVLCPAAVTAPFTHDEKAYLLRRDPALKAAVDAWLRQELDAGGWRKHLDAAMH*