ggKbase home page

berkeley_reactor_200306_biofilm_scaffold_16012_69

Organism: 2019_SCN_bioreactor_200211_biofilm_Rhizobiales_70_15

near complete RP 48 / 55 BSCG 46 / 51 ASCG 10 / 38 MC: 1
Location: 66813..67886

Top 3 Functional Annotations

Value Algorithm Source
Tartrate dehydrogenase n=2 Tax=Rhizobium/Agrobacterium group RepID=B9JNI5_AGRRK similarity UNIREF
DB: UNIREF100
  • Identity: 88.5
  • Coverage: 357.0
  • Bit_score: 652
  • Evalue 1.70e-184
tartrate dehydrogenase similarity KEGG
DB: KEGG
  • Identity: 88.5
  • Coverage: 357.0
  • Bit_score: 652
  • Evalue 4.80e-185
Tartrate dehydrogenase/decarboxylase TtuC {ECO:0000313|EMBL:GAJ92353.1}; TaxID=1220581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium.;" source="Rhizobium rhizogenes NBRC 13257.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 88.5
  • Coverage: 357.0
  • Bit_score: 652
  • Evalue 2.40e-184

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Agrobacterium rhizogenes → Agrobacterium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1074
ATGCGCAGCCACGCGATCGCCGCCATCCCGGCCGACGGCATCGGGCCGGAAGTCATCAGCGCCGGCCTGCGGGTGCTCGCCGCCCTTGCGCAACGGCTCGGCGACGTCAGGTTCGACGTCGAGACCTTCGGCTGGGGCTCCGACCACTATCGGAAGCACGGCGTGATGATGCCGGCGGACGGCCTGGCGACGCTGAAAACATTCGACGCGATCTATTTCGGCGCCGTCGGCGCGCCCGACGTTCCCGACCACGTCACGCTCTGGGGCCTGCGCCTGCCGATCTGCCAGGGCTTCGACCAATATGCCAATGTCCGCCCGACCCGGATCCTGCCCGGCATCACGCCGCCCCTGCGCCATTGCGGGCCCGGCGACCTCGACTGGGTGATCGTGCGCGAGAACTCCGAAGGCGAATATTCCGGCCATGGCGGACGGGCCCACAAGGGCTTGCCGGAGGAAGTCGGCACGGAAGTGGCGATCTTCACCCGGGTCGGCGTCACGCGCATCATGCGCTACGCCTTCGGCCTCGCCCGCTCGCGCCCGCGCAAGCTGCTCACCGTCGTCACCAAGTCCAACGCTCAGCGCCACGGCATGGTGATGTGGGACGAGATCGCCGCCGAGGTGGCGCAGGAATTCCCGGACGTGGCCTGGGACAAGATGCTGGTCGACGCCATGACCGTGCGCATGACGCTGAAGCCCCGGAGCCTCGACACGATCGTGGCCACCAACCTGCATGCCGACATCCTGTCGGACCTCGCCGGGGCGCTCGCCGGGTCCCTCGGCGTCGCCCCGACCGCCAATATCGATCCGCAGCGCCGCTTCCCCTCGATGTTCGAGCCGATCCACGGCTCGGCCTTCGACATCACCGGCAAGGGCATCGCCAACCCGGTCGCCAGCTTCTGGACCGCGGCGCAGATGCTGGAGCATCTCGGCGAGCCGGAGGCGGCCGCCCGCCTGATGCGCGCCATCGAACGCGTCACCGGCGCTGGCATCCTCACCCCGGACCTCGGGGGCACCGCCACCACCCGGGACGTCACCGAGGCGGTGGTCGACGCCATCCATTCCTCCAACATCTGA
PROTEIN sequence
Length: 358
MRSHAIAAIPADGIGPEVISAGLRVLAALAQRLGDVRFDVETFGWGSDHYRKHGVMMPADGLATLKTFDAIYFGAVGAPDVPDHVTLWGLRLPICQGFDQYANVRPTRILPGITPPLRHCGPGDLDWVIVRENSEGEYSGHGGRAHKGLPEEVGTEVAIFTRVGVTRIMRYAFGLARSRPRKLLTVVTKSNAQRHGMVMWDEIAAEVAQEFPDVAWDKMLVDAMTVRMTLKPRSLDTIVATNLHADILSDLAGALAGSLGVAPTANIDPQRRFPSMFEPIHGSAFDITGKGIANPVASFWTAAQMLEHLGEPEAAARLMRAIERVTGAGILTPDLGGTATTRDVTEAVVDAIHSSNI*