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berkeley_reactor_200306_biofilm_scaffold_16012_68

Organism: 2019_SCN_bioreactor_200211_biofilm_Rhizobiales_70_15

near complete RP 48 / 55 BSCG 46 / 51 ASCG 10 / 38 MC: 1
Location: comp(65763..66677)

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator protein n=1 Tax=Agrobacterium radiobacter (strain K84 / ATCC BAA-868) RepID=B9JNI7_AGRRK similarity UNIREF
DB: UNIREF100
  • Identity: 73.0
  • Coverage: 304.0
  • Bit_score: 427
  • Evalue 5.70e-117
transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 73.0
  • Coverage: 304.0
  • Bit_score: 427
  • Evalue 1.60e-117
Transcriptional regulator {ECO:0000313|EMBL:EJK87480.1}; TaxID=1144306 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. AP16.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 73.4
  • Coverage: 304.0
  • Bit_score: 427
  • Evalue 8.00e-117

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Taxonomy

Rhizobium sp. AP16 → Rhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 915
ATGGAGATCGGCCAGTTGCGCTGCTTCGTGGCAGTGGCGGAGGAGCTGCATTTCGGGCGCGCCGCCCGCCGGCTCGCCATCCTGCCCGCCTCGCTCGGGCGCCAGATCCGGCTGCTCGAGGAGAGCCTGAGCGTGCGCCTCGTCGAGCGGACGACGCGCACCGTCCTGCTGACCAGGGACGGCACCCGGCTCCTGGGGGAGGCTCGGCAGGTCCTGGCGCAGGTGGATGCGATCACGGGGCGGTTTCGGCGGCAGGGCCGGCGCGAGCGCAGCGAGATCCGCATCGGCGCGATCGACAGCGCCGCGGCGGGGTTGATGCCCCAGCTCCTCCTCGACCTGAAGCTGGAGCATCCGGCGATCGCCGTGCAGCTCCTGGAGGACAAGACGGCGCGCCTGCTGCCGAAGCTGAGGTCCGGCCGGCTCGACCTCGCCTTCATCCGGCCGCCCGAGGCGGTCGACCGCAGCCTCGAGCTGCTGGCGCTGTTCAGCGAGACCGCGGTGGTGGCGATGCCGCAAGGCCATCGCCTCGCCGGCCGCGAGCGCGTCGCGATCGCCGACCTCGACGACGAGCCGCTGATCGTCCCGGACCGCCGATCGCGGCCGCACAGCCACGACCTGACCATCGAGCTGTTCGCGGCGGCGGGATCGCACCTGCGCATCGCGCAGGTCGCCGACGAGAAGCAGACGATCGTCGTCCTGGTCGCCGCCGGCATCGGGCTCGCCATCGTGCCGCGATGGACCTCGCGGCTCGCGGTCGGCGGCGTGCGGTATGTCCCGCTCGACACCGGGCGGGACGGCACGGCGACCCGGCTGCCCCTGTCGGCCGCCTGGCTGAAGGGCGTGCGCGATCCCCTGCGCGACAGCCTGGTCGCGATCCTGACGAAGAACCTCGCGGCCTATGCGCGCAACGCCTGA
PROTEIN sequence
Length: 305
MEIGQLRCFVAVAEELHFGRAARRLAILPASLGRQIRLLEESLSVRLVERTTRTVLLTRDGTRLLGEARQVLAQVDAITGRFRRQGRRERSEIRIGAIDSAAAGLMPQLLLDLKLEHPAIAVQLLEDKTARLLPKLRSGRLDLAFIRPPEAVDRSLELLALFSETAVVAMPQGHRLAGRERVAIADLDDEPLIVPDRRSRPHSHDLTIELFAAAGSHLRIAQVADEKQTIVVLVAAGIGLAIVPRWTSRLAVGGVRYVPLDTGRDGTATRLPLSAAWLKGVRDPLRDSLVAILTKNLAAYARNA*