ggKbase home page

berkeley_reactor_200306_biofilm_scaffold_16012_79

Organism: 2019_SCN_bioreactor_200211_biofilm_Rhizobiales_70_15

near complete RP 48 / 55 BSCG 46 / 51 ASCG 10 / 38 MC: 1
Location: 78544..78846

Top 3 Functional Annotations

Value Algorithm Source
Putative transposase for insertion sequence NGRIS-20e n=1 Tax=Rhizobium sp. (strain NGR234) RepID=C3MBS3_RHISN similarity UNIREF
DB: UNIREF100
  • Identity: 72.7
  • Coverage: 99.0
  • Bit_score: 148
  • Evalue 2.90e-33
transposase for insertion sequence NGRIS-20g similarity KEGG
DB: KEGG
  • Identity: 72.7
  • Coverage: 99.0
  • Bit_score: 148
  • Evalue 8.20e-34
Putative transposase for insertion sequence NGRIS-20i {ECO:0000313|EMBL:ACP23483.1}; TaxID=394 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Sinorhizobium.;" source="Rhizobium sp. (strain NGR234).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 72.7
  • Coverage: 99.0
  • Bit_score: 148
  • Evalue 4.00e-33

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Sinorhizobium fredii → Sinorhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 303
ATGGAGAACCGCATCAAGGAGTGCCAAGCCGATCTGTTCGCCGACCGCACCTCCACCGCGACGATGCAGGCCAACCAACTGCGGCTGTGGCTGGCCTCGATCGCCTACGTCCTGGTCTGCGCCCTGCGCCGCATCGGCCTCGCCCACACCCAGTTCGCTGCCGCCAGCTGCGGCACGTTGCGCCTCAAGCTCCTGAAGACCGGGGCGCTGGTCAGGATCAGCGTCCGGCACGTCAAGATCGCCTTCGCCTCGGCCTGCCCCGTCATGCCCGAATGGCGCCTGGCCGCGGCGCGGCTCGCCTGA
PROTEIN sequence
Length: 101
MENRIKECQADLFADRTSTATMQANQLRLWLASIAYVLVCALRRIGLAHTQFAAASCGTLRLKLLKTGALVRISVRHVKIAFASACPVMPEWRLAAARLA*