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berkeley_reactor_200306_biofilm_scaffold_16012_80

Organism: 2019_SCN_bioreactor_200211_biofilm_Rhizobiales_70_15

near complete RP 48 / 55 BSCG 46 / 51 ASCG 10 / 38 MC: 1
Location: 79276..80010

Top 3 Functional Annotations

Value Algorithm Source
Transposase, IS4 family n=1 Tax=Rhodopseudomonas palustris (strain BisA53) RepID=Q07SU7_RHOP5 similarity UNIREF
DB: UNIREF100
  • Identity: 60.6
  • Coverage: 94.0
  • Bit_score: 113
  • Evalue 2.50e-22
transposase, IS4 similarity KEGG
DB: KEGG
  • Identity: 60.6
  • Coverage: 94.0
  • Bit_score: 113
  • Evalue 7.10e-23
Transposase, IS4 family {ECO:0000313|EMBL:ABJ04987.1}; TaxID=316055 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain BisA53).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 60.6
  • Coverage: 94.0
  • Bit_score: 113
  • Evalue 3.50e-22

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Taxonomy

Rhodopseudomonas palustris → Rhodopseudomonas → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 735
ATGATGCGTCCGAGAACGACGAGAGAGCGGCCAGACCGACCTCCCCGGCTCGACCAGATCCTCGCCATGAACCGTGCGCTGGGGAAGCTGGCACGGACGATCGACTGGCGTTTTCTGGAAAGCCGGCTCGGTGCGGTCTATGATGATGATCCCGGCCGGCCGCCCTTGCCGAACCGGCTGATGGCCGGCTTGGCCATCCTTAAACGACATACAAGCTGTTGGACGAGGCGCTGGGTGGAAAGCCCCTATTTCCAGTTCTTCTGTGATGGGATGGACGGCCCCGGCGCCTTCGTGGCGCTGCATCAGTCGACCGTCAGGGGGATCAGTCATGTCCGCCATCGCAATCATTGGACTGGATATCGCAAAGAACGTGTTTCAGGTTCACGGCGCCGACGCCAATGGCGCTCCCGCGCTCAAGAGGCAGATCAGACGAGGCCACGTCCTGGCGCGTTCTTCGCTAGCCTTGCGTCGTGCCTGGTTGCGCTGGAGGCCTGTTTCACTGCTCATTTCTGGGCGAGGGAAATCGTCAAACACAGACACGAAGTCCGCATGATCCCGTCTCAGTACGTGAAGCCGGTCATCAAGCGGAACAAGACCGACAGTGCCCATGCCGAGGCAATCTGTGAAGCGGCCGGCCGACGATGCGCTTCGTCGCAGTCAAGAGTGTTCAACAGCAAAGCGCCCTGGTTCTGCATCGGGCGCGTGATCTTCTTGTACGGCAGCGCACCAAGTTGA
PROTEIN sequence
Length: 245
MMRPRTTRERPDRPPRLDQILAMNRALGKLARTIDWRFLESRLGAVYDDDPGRPPLPNRLMAGLAILKRHTSCWTRRWVESPYFQFFCDGMDGPGAFVALHQSTVRGISHVRHRNHWTGYRKERVSGSRRRRQWRSRAQEADQTRPRPGAFFASLASCLVALEACFTAHFWAREIVKHRHEVRMIPSQYVKPVIKRNKTDSAHAEAICEAAGRRCASSQSRVFNSKAPWFCIGRVIFLYGSAPS*