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berkeley_reactor_200306_biofilm_scaffold_20018_136

Organism: 2019_SCN_bioreactor_200211_biofilm_Rhizobiales_70_15

near complete RP 48 / 55 BSCG 46 / 51 ASCG 10 / 38 MC: 1
Location: comp(129667..130440)

Top 3 Functional Annotations

Value Algorithm Source
3-oxoacyl-ACP reductase n=1 Tax=Meiothermus timidus RepID=UPI0003608EB5 similarity UNIREF
DB: UNIREF100
  • Identity: 48.6
  • Coverage: 255.0
  • Bit_score: 244
  • Evalue 9.90e-62
Uncharacterized protein {ECO:0000313|EMBL:KJC48693.1}; TaxID=1619232 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. LTSP885.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 72.1
  • Coverage: 258.0
  • Bit_score: 379
  • Evalue 2.80e-102
short-chain dehydrogenase/reductase SDR similarity KEGG
DB: KEGG
  • Identity: 48.8
  • Coverage: 254.0
  • Bit_score: 243
  • Evalue 3.70e-62

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Taxonomy

Bradyrhizobium sp. LTSP885 → Bradyrhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 774
ATGGACGCACTTGCCCGATTCAGCCTGGCCGGCAAGACCGCCGCGATCACCGGCGGCGCCCGCGGCATCGGCTATGCCGTGGCCGAGCTGTTCGCCGGCGCCGGCGCCGATATCGCGCTGGTCGACCTCAGTGCCGAGACCGGCGCCGCCGCGGCGGAGCGCCTGGCCGGGTCCGGCCAGCGGACGGCGTTCCACCAGGCCGACCTGCGCGAGCCCGAGGCGGCGACGCGGGCGGTCGAGGCGATCGAGGCGGCGTTCGGGCGCATCCACATCCTGGTCAATTGCGTCGGCATCAACCCGAACACCGACGCGCTCGACATCCCGCCGCAGGAATGGCGCGACGTGATGGACGTCAACGTCAACGCCCAGTTCTTCGCGGCGCAGGCCTTCGCCCGCCACATGGTCCGGCAGGGCGGCGGCAGCATCGTCGCGATCGGCTCGAATTCGGGCTTCACGGTCGACAAGCCGCAGCCCCAGTCGCACTACAATGCCAGCAAGGCGGCGGTGCATCAGATGGTGAAGTCGCTGGCGGTCGAGCTGGCGCCGCGCGCCATCCGCGTCAACGCCGTGGCGCCGGGCTACACGCTGACGGAGATGACCAAGCTCGGGCTGAGCAAGCGCGAATGGGTCGAGGTCTGGGAGGAGATGACGCCGATGCGGCGCTTCGCCGACCCTTCCGAGATCGCCCATGCCGTGCTGTTCCTCGCCAGCGACGCGGCGAGCTACGTCACGGGGACGATCCTTCTGGTCGACGGCGGCTACACCTGCTGGTGA
PROTEIN sequence
Length: 258
MDALARFSLAGKTAAITGGARGIGYAVAELFAGAGADIALVDLSAETGAAAAERLAGSGQRTAFHQADLREPEAATRAVEAIEAAFGRIHILVNCVGINPNTDALDIPPQEWRDVMDVNVNAQFFAAQAFARHMVRQGGGSIVAIGSNSGFTVDKPQPQSHYNASKAAVHQMVKSLAVELAPRAIRVNAVAPGYTLTEMTKLGLSKREWVEVWEEMTPMRRFADPSEIAHAVLFLASDAASYVTGTILLVDGGYTCW*