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berkeley_reactor_200306_biofilm_scaffold_20018_137

Organism: 2019_SCN_bioreactor_200211_biofilm_Rhizobiales_70_15

near complete RP 48 / 55 BSCG 46 / 51 ASCG 10 / 38 MC: 1
Location: comp(130455..131111)

Top 3 Functional Annotations

Value Algorithm Source
HAD-superfamily hydrolase, subfamily IA, variant 3 n=1 Tax=Starkeya novella (strain ATCC 8093 / DSM 506 / CCM 1077 / IAM 12100 / NBRC 12443 / NCIB 9113) RepID=D7AAY2_STAND similarity UNIREF
DB: UNIREF100
  • Identity: 56.1
  • Coverage: 205.0
  • Bit_score: 235
  • Evalue 3.90e-59
HAD superfamily hydrolase similarity KEGG
DB: KEGG
  • Identity: 56.1
  • Coverage: 205.0
  • Bit_score: 235
  • Evalue 1.10e-59
HAD-superfamily hydrolase, subfamily IA, variant 3 {ECO:0000313|EMBL:ADH90999.1}; TaxID=639283 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Starkeya.;" source="Starkeya novella (strain ATCC 8093 / DSM 506 / CCM 1077 / IAM 12100 /; NBRC 12443 / NCIB 9113).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 56.1
  • Coverage: 205.0
  • Bit_score: 235
  • Evalue 5.50e-59

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Taxonomy

Starkeya novella → Starkeya → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 657
ATGAGCATCCGCGCCATCGCCTGGGACATCGACGGGACGCTGGTCGACAGCGAGCCGCTGCATCACGAGGCGCTGATCGGCGCCGGCCGGCGCTGGGGCGTCGATCTCGCCGGCCTCAGCATGGACGCCTTCCGCGGCGTGCACCTGCCCGACGTCTGGGCGGCGCTCGTCCCGCGCCTGCCCGACGGCGTCACCCTCGCGGCCTGGACCGCGGCGGTGGAGGACCACTACGCCATCCACGCCCCGGCGCTGCAGCCGCTGCCGGGCGTGCGCGAGACGGTGGCGCGCATCGCGGCGCTGGGCCTGCCGCAGATCTGCGTCTCCAATTCCAGCCGCCGCGTGGTCGACGCCAACCTGGCGGCGCTCGGCCTCGGCGGCGCCATCCTGTTCTCGATCAGCCTCGACGACGTCGTGCACGGCAAGCCCGATCCCGAGCCCTATCGCCGCGGCGCCGAGCGGCTCGGCCTCGCCCCCGCCGCGGTGCTGGCGGTGGAGGACAGCGTCACCGGCGCCAGCGCCGCCCGTGCCGCCGGCCTCCAGGTCGCCGGCTACGGCCCGGTGCAGGCGCCGGTCGCCGGCGTCGACTTTGCCATCGACCGCATCGAGCGGGTGCTCGACCTCGTCGGCCACCGGGCCGAGGCTCCCATCCCCAGCTAG
PROTEIN sequence
Length: 219
MSIRAIAWDIDGTLVDSEPLHHEALIGAGRRWGVDLAGLSMDAFRGVHLPDVWAALVPRLPDGVTLAAWTAAVEDHYAIHAPALQPLPGVRETVARIAALGLPQICVSNSSRRVVDANLAALGLGGAILFSISLDDVVHGKPDPEPYRRGAERLGLAPAAVLAVEDSVTGASAARAAGLQVAGYGPVQAPVAGVDFAIDRIERVLDLVGHRAEAPIPS*