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berkeley_reactor_200306_biofilm_scaffold_20018_147

Organism: 2019_SCN_bioreactor_200211_biofilm_Rhizobiales_70_15

near complete RP 48 / 55 BSCG 46 / 51 ASCG 10 / 38 MC: 1
Location: comp(142266..143198)

Top 3 Functional Annotations

Value Algorithm Source
ABC-type dipeptide/oligopeptide/nickel transport system, permease component n=1 Tax=Rahnella aquatilis (strain ATCC 33071 / DSM 4594 / JCM 1683 / NBRC 105701 / NCIMB 13365 / CIP 78.65) RepID=H2IUP2_RAHAC similarity UNIREF
DB: UNIREF100
  • Identity: 61.6
  • Coverage: 315.0
  • Bit_score: 379
  • Evalue 1.80e-102
dipeptide/oligopeptide/nickel ABC transporter permease similarity KEGG
DB: KEGG
  • Identity: 61.6
  • Coverage: 315.0
  • Bit_score: 379
  • Evalue 5.20e-103
ABC-type dipeptide/oligopeptide/nickel transport system, permease component {ECO:0000313|EMBL:AEX51685.1}; TaxID=745277 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Rahnella.;" source="Rahnella aquatilis (strain ATCC 33071 / DSM 4594 / JCM 1683 / NBRC; 105701 / NCIMB 13365 / CIP 78.65).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 61.6
  • Coverage: 315.0
  • Bit_score: 379
  • Evalue 2.60e-102

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Taxonomy

Rahnella aquatilis → Rahnella → Enterobacteriales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 933
TTGCTGCGTCTCGTCGCGACACGGGCCGGCCTCGGGATCCTGACGCTCTTCGCCGTGTCGGTGGTCATCTTCATCTGCACGCAGATCCTGCCCGGCGACGTCGCCTCGGCCGTGCTCGGCAACCAGGCCACGCCCGAGGCCCTCAAGGCCTTCCGGCTCGAGCTCGGGCTCGATCAGCCCGCCTATGCCCGCTACTTCAACTGGCTGTGGGGCGTGCTGCACGGCGATCTCGGCCGATCGCTGACCAACAAGCGCGACATCATCGAGGACCTCTGGCCCCGCTTCCTCAACACGCTGTTCCTCGCCGGCTATACCGCTCTGTTCGCGGTTCCCCTCGCCGTCGGCCTCGGCATCATGGCCGCCATCCGCGAAGGCCGGTGGCAGGACCGGCTGGCCAACGTGCTGACCCTGATCGCGATCTCGATGCCGGAATTCTTCATCGGCTACATCCTGATCGCACTGTTCCCGGGTGCGTCGCTCGCCACCGCCTTCTCCGGCATAAGCTTCAGCGACCGCGTCGCCATCACGACTTTGCCCGCCATTACTTTGACGTTGCTGGTCACGGCGCACATGCTGCGCATGACCCGCAACTCGGTGCTGGCGATCATGTCGACGCCCTATGTCGAGATGGCCTTCCTGAAGGGCCTGAAACGTTCGCGCGTCGTCTCCCGCCACGCCCTGCCCAATGCGGCCGGCCCGATCGTCTCGGTGGTGGCGCTCAACCTCGCCTATCTCGTGGTCGGCGTGGTGGTGGTCGAGAATGTCTTCACCTATCCCGGGGTCGGACAATACATGGTCGATGCCGTCTCCAAGCGCGACGTGCCGGTGATCCAGGCCTGCGGCCTGGTGTTCGCCGGCGTGTTCGTCACCTTGAACACTATCGCGGACATGGTGGCGATCCTGGTCAACCCCCGCCTGCGGCACCCGAGATAG
PROTEIN sequence
Length: 311
LLRLVATRAGLGILTLFAVSVVIFICTQILPGDVASAVLGNQATPEALKAFRLELGLDQPAYARYFNWLWGVLHGDLGRSLTNKRDIIEDLWPRFLNTLFLAGYTALFAVPLAVGLGIMAAIREGRWQDRLANVLTLIAISMPEFFIGYILIALFPGASLATAFSGISFSDRVAITTLPAITLTLLVTAHMLRMTRNSVLAIMSTPYVEMAFLKGLKRSRVVSRHALPNAAGPIVSVVALNLAYLVVGVVVVENVFTYPGVGQYMVDAVSKRDVPVIQACGLVFAGVFVTLNTIADMVAILVNPRLRHPR*