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berkeley_reactor_200306_biofilm_scaffold_20018_148

Organism: 2019_SCN_bioreactor_200211_biofilm_Rhizobiales_70_15

near complete RP 48 / 55 BSCG 46 / 51 ASCG 10 / 38 MC: 1
Location: comp(143384..144967)

Top 3 Functional Annotations

Value Algorithm Source
ABC transporter substrate-binding protein n=1 Tax=Erwinia toletana RepID=UPI00034DCC5A similarity UNIREF
DB: UNIREF100
  • Identity: 48.7
  • Coverage: 513.0
  • Bit_score: 534
  • Evalue 7.50e-149
extracellular solute-binding protein similarity KEGG
DB: KEGG
  • Identity: 49.3
  • Coverage: 511.0
  • Bit_score: 533
  • Evalue 3.60e-149
Extracellular solute-binding protein, family 5 {ECO:0000313|EMBL:ABM56197.1}; Flags: Precursor;; TaxID=391735 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Verminephrobacter.;" source="Verminephrobacter eiseniae (strain EF01-2).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 49.3
  • Coverage: 511.0
  • Bit_score: 533
  • Evalue 1.80e-148

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Taxonomy

Verminephrobacter eiseniae → Verminephrobacter → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1584
ATGACAGACAAGACTTCGAAGCAAGGCTCATCGGGGCTGATCCTGGACCGCCGCGAATTGATGGCAGGCGCAGCAGCGCTCGGCCTCGGATTCGGCTTCGGCATGGGCTCGATGGCGGGTTCGGCCCTGGCGGACGACGCGCCCAAGAAGGGTGGCACGCTGCGCCTCGGCATGGAAGGCGGCAGCGCCTCCGACAGCCTCGACCCGCGCACCTATGCCGACTCGATCCCGATCTCCTATGGCTGGCAGATCTGGAACGGCCTGACCGAGGTCGATTCGCACGGCAACATCGCCGGCGAGCTCGCCGAGAGCTGGGAAGCCAAGCCCGGCGCCACTGCCTGGGTCTTCAACATCCGCAAGGGCGTCACCTTCACCTCGGGCAAGACGCTGGACGCCGACGACGTCATCTATTCGCTCAACCTGCATCGCGGCGAGACCAAGTCGGGCGCCAAGGACCTGCTCAGCGGCATCACCGACATCAAGAAGCTCAACGCCAACCAGATCGAGATCACGCTGAAGAGCGGCGATGCCGACCTGCCCTACGCCTTCGCCGACTATCACGTCCTGATCGTGCCCAACGGCTTCACCGATTTCTCCAAGCCCGACGGCACCGGCGCCTACGCCCTGGAGAGCTTCGAGCCGGGCGTGCGGGTGCTCACCAAGAACAAGGGCAATTACTGGAAGCCGAACCGCGGCAATTTCGACTCGATCGAGCTGCGCTACATCCCGGATGCGTCGGCGCGCGTCCAGGCGCTGATCTCCGGCCAGATCGATGCGGCCAACCGCCTCGATGCCCGCACCGTCAACCTGGTGATGAAGGCGCCGCGGGTGAACGTGGTGCGGACCAAGGGCACCGGCAACCGCTTCGCCTTCGTGGCGCGGTGCGACCAGGACCCCTACACCAACAACGACCTGCGCCTTGCCCTGAAATACGGCATCGACCGCAAGAAGATCGTCGACACCGTCTACAAGGGCTTCGCGACCATCGGCAACGACACCACCATCGCGCCCTCGGCCAAGTATTATGCCAAGGACGTGCCGCAGCGCCCCTACGACCCGGACAAGGCGGCCTTCCACTTCAAGAAGGCGGGCCTGGCCAATGCCAAGCTGGAGCTGCAGGTCTCGGAGGGCGCCTTCTCCGGCGCCACCGATTCGGCGGTGCTCTACCAGGAGGCGATAAGCAAGGCCGGCATCACCCTCGACGTCAAGCGTGTCTCGGGCGACGGCTACTGGGACAATGTCTGGCTCAAGGCGCCGTTCTGTGCGGTCTACTGGGGCACCCGCCCGACCGTCGACAACCAGCTGTCGCAGACCTTCCTGTCCACGGCCAACTGGAACGACACGGCCTGGAAGCGGCCGGAGTTCGACAAGATCATCTTCGAGGCCCGCGCCGAGCTCGACGAGGCCAAGCGCCAGCAGCTCTATTCGGAGGCGCAGCGGATGATCACCGATGACGGCGGCATGGTGTGCTTCGCCATCGGCGACTATCTCGACGGCTATTCCAAGAAGGTGATGGGCACGGCGCCGCACCCCCATTACGACATGTGCGACCAGCGCATCGCCGAAAAGGGCTGGTTCGCCTGA
PROTEIN sequence
Length: 528
MTDKTSKQGSSGLILDRRELMAGAAALGLGFGFGMGSMAGSALADDAPKKGGTLRLGMEGGSASDSLDPRTYADSIPISYGWQIWNGLTEVDSHGNIAGELAESWEAKPGATAWVFNIRKGVTFTSGKTLDADDVIYSLNLHRGETKSGAKDLLSGITDIKKLNANQIEITLKSGDADLPYAFADYHVLIVPNGFTDFSKPDGTGAYALESFEPGVRVLTKNKGNYWKPNRGNFDSIELRYIPDASARVQALISGQIDAANRLDARTVNLVMKAPRVNVVRTKGTGNRFAFVARCDQDPYTNNDLRLALKYGIDRKKIVDTVYKGFATIGNDTTIAPSAKYYAKDVPQRPYDPDKAAFHFKKAGLANAKLELQVSEGAFSGATDSAVLYQEAISKAGITLDVKRVSGDGYWDNVWLKAPFCAVYWGTRPTVDNQLSQTFLSTANWNDTAWKRPEFDKIIFEARAELDEAKRQQLYSEAQRMITDDGGMVCFAIGDYLDGYSKKVMGTAPHPHYDMCDQRIAEKGWFA*