ggKbase home page

berkeley_reactor_200306_biofilm_scaffold_95231_53

Organism: 2019_SCN_bioreactor_200211_biofilm_Rhizobiales_70_15

near complete RP 48 / 55 BSCG 46 / 51 ASCG 10 / 38 MC: 1
Location: 50954..51907

Top 3 Functional Annotations

Value Algorithm Source
Short-chain dehydrogenase/reductase SDR n=1 Tax=Sphingomonas sp. MM-1 RepID=M4S0V8_9SPHN similarity UNIREF
DB: UNIREF100
  • Identity: 73.4
  • Coverage: 316.0
  • Bit_score: 464
  • Evalue 5.80e-128
short-chain dehydrogenase/reductase SDR similarity KEGG
DB: KEGG
  • Identity: 73.4
  • Coverage: 316.0
  • Bit_score: 464
  • Evalue 1.60e-128
Short-chain dehydrogenase/reductase SDR {ECO:0000313|EMBL:AGH48558.1}; TaxID=745310 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. MM-1.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 73.4
  • Coverage: 316.0
  • Bit_score: 464
  • Evalue 8.10e-128

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Sphingomonas sp. MM-1 → Sphingomonas → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 954
ATGAGCTTCGGAGCAGACTCGACCACGGACGAGGTGCTGGCAGGGTACGACCTCGCCGGCAAGCGCGTCCTCGTCACCGGCGTCTCGGCCGGCCTCGGCGTCGAGACGGCGCGGACCCTGGTGGCGCATGGGGCCGCCGTCGTCGGGGCGGCGCGCGACCTCGCCAAGGCGGAGCGGGCGACGACATCCGTGCGCGACGCACGGGCACGCGGCGCCACCTTCGATCTCATCGAGCTCGACCTCGCCGCCCTCGCGAGCGTCAGGGCCTGCGCCGACCGGCTCGTCGGGACCGGCCGGCGCTTCGACGTCGTCATCGCCAATGCCGGGGTGATGGCCTGCCCGCAGGGCAAGACGAAGGACGGCTTCGAGACCCAGTTCGGCACGAACCATCTCGGGCACTTCCTGTTCGTCAACCGGATCGCGCCGCTGATCGAGGACGGCGGACGCGTCGTCGTCCTCTCCTCGGCGGGACACCGCTATGCCGATGTCGATCTCGACGATCCCGGCTTCGAGCGGACCGACTATGCGCCGTTCGTGGCCTATGGACGCTCCAAGACCGCCAACGCGCTGTTCGCGGCGGAGTTCGACCGCCGCCACCGGGCGCGCGGGGTCCGCGCGGCCTCCGTCCATCCAGGCGGCATCCGCACGGAGCTGTCCCGGCACATGAGCGAGGACGAGCTCGCCCGGCTGATCGCCTCGATCAATGCCAGCCAGCCGCCGGGCGCGCCGCCGTTCCACTACAAGAGCGTGCCGCAGGGCGCGGCGACGACGGTCTGGGCGGGATTCGTCGCGCCGGCCGACGAGGTCGGCGGCCGCTATTGCGAAGATTGCCACGTCGCGGAGATCGTCACGGACCCGGCCGTGCGCGGCGGCGTCAGGCCCTATGCGCTCGATCCCGAGCGGGCCCGTGCGCTGTGGGCGTTGAGCGAAACGATGGTGGGAGAGGCTTTCTGA
PROTEIN sequence
Length: 318
MSFGADSTTDEVLAGYDLAGKRVLVTGVSAGLGVETARTLVAHGAAVVGAARDLAKAERATTSVRDARARGATFDLIELDLAALASVRACADRLVGTGRRFDVVIANAGVMACPQGKTKDGFETQFGTNHLGHFLFVNRIAPLIEDGGRVVVLSSAGHRYADVDLDDPGFERTDYAPFVAYGRSKTANALFAAEFDRRHRARGVRAASVHPGGIRTELSRHMSEDELARLIASINASQPPGAPPFHYKSVPQGAATTVWAGFVAPADEVGGRYCEDCHVAEIVTDPAVRGGVRPYALDPERARALWALSETMVGEAF*