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berkeley_reactor_200306_biofilm_scaffold_95231_54

Organism: 2019_SCN_bioreactor_200211_biofilm_Rhizobiales_70_15

near complete RP 48 / 55 BSCG 46 / 51 ASCG 10 / 38 MC: 1
Location: comp(51914..53710)

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Methyloferula stellata RepID=UPI000375DB5E similarity UNIREF
DB: UNIREF100
  • Identity: 69.8
  • Coverage: 609.0
  • Bit_score: 854
  • Evalue 4.90e-245
cytochrome c biogenesis protein, transmembrane region similarity KEGG
DB: KEGG
  • Identity: 69.6
  • Coverage: 598.0
  • Bit_score: 836
  • Evalue 3.90e-240
Cytochrome c biogenesis protein, transmembrane region {ECO:0000313|EMBL:CCB66334.1}; TaxID=717785 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium sp. (strain MC1).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 69.9
  • Coverage: 598.0
  • Bit_score: 836
  • Evalue 1.90e-239

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Taxonomy

Hyphomicrobium sp. MC1 → Hyphomicrobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1797
ATGCTGCTCGCGCTCGTCTCCTATCTCGGCGGGGTCCTGACCATCGTCAGCCCGTGCATCCTGCCGATCCTGCCCTTCGTCTTCGCTCGCGCGGACAAGCCCTTCCGGACCAGCACCCTGCCGATGCTGGTGGGCATGACCCTGACCTTCGCGCTGGTCGCCTCCCTGGCCGCGGTCGGCGGCGGGTGGGCCGTGCGGGCGAACGAGTATGGCCGCATCGCGGCCCTCGTGCTTCTGGCGGCGTTCGGCGTGGCCCTGCTGCTTCCGAGCCTCGCCGATCGCCTCGCGCGGCCGCTGGTCGCAGCGGGTGCCCGCCTGTCCGAGGCCGCCGACCGGCAGTCCGCGACCGGCTCGGCGGTGCTTCCCTCGTTCCTGCTCGGCGTCGCGACGGGCCTGCTCTGGGCCCCCTGCGCCGGGCCGATCCTCGGCCTGCTCCTCACGGGGGCCGCGCTCAACGGTGCGAGCGCCACGACCTCTCTGCTGCTTCTCGCCTACGCCACCGGCGCTGCCACCTCCCTGGCGCTGGCCCTGCTCGTCGGCGGGCGCGCCTTCGCCGCGATGAAACGCTCCCTCGGCGTCGGCGAATGGGTGCGGCGCGGGCTCGGCCTCGCCGTGTTGTGCGGCGTCGTCGCGATCGCCTTCGGGCTCGACACCGGCCTCCTGACCCGCCTGTCGCTGGCGAGCACGGCGAGCCTCGAGCAGGGGCTCGTCGACAAGGTCCGGCCCATGCCGGCGCAGGCCGCATCGCCGGTGATGATCGGCTCGTCCGACATGATGAGCGGCCCCGACGCTGCGGCGCCGGCGCCCGCGGCCGATGAGGCCCAGGCGCTGCCGAGCGAAGGCGTCATGCCGTCCCTGAACGGCGCCGTGCAATGGCTGAACTCTCCGCCGCTCACCGCGGAGGGCCTGCGCGGCAAGGTGGTCCTGATCGACTTCTGGACCTATTCCTGCATCAATTGCCTGCGGGCCATCCCTTATGTCGAGGCCTGGGCCAGGAAGTACAGGGACCAGGGCCTCGTCGTCATCGGCGTCCACGCGCCGGAGTTCGCCTTCGAGCGGAACGTCGCCAATGTCGAGAAGGCGATCCGGGATCTCGGCATCGACTACCCCGTCGCGATCGACAACGACTATGCGATCTGGCGCGCGTTCAACAACGAGTATTGGCCGGCCCATTACTTCATCGATGCCAAGGGCCGGATCCGCCACCACCATTTCGGCGAGGGTGAGTATGACGGGTCGGAAAAGGTGATCCAGGCGCTGCTCGCCGAGGCGGGCCACGCACCGGCGGCGGCATCCCTCGTGACGGTCGACGCCAGGGGCGTCCATGCCGCGGCCGACATGGCGAACGTGCAGTCGCCCGAGACCTATATCGGCTATGAGCGGGCGGAGAACTTCGCCTCCCCCGGAGGAGCCGATCACGACAGGGCCAAGCGGTACAGCGCAGCGCCGTCCCTGGATCTCAACCAGTGGAGCCTCGGCGGCGACTGGACGATCGGCGCCGAGGCCGCGACCCTCAATGCGGCGGAAGGGACGCTGACCTACCGGTTCCACGCCCGCGACCTGCATCTGGTGCTCGGCCCCGGCAGCGACGGCAAGCCGGTGCGGTTCAAGGTCCTGGTCGACGGCAAGCCGCCGCAGACGGACCATGGCACCGACACGGATGCCGACGGCAACGGCACGATCGTGGGCCAGCGCCTCTATCAGCTCGTCCGCCAGGCTGGAGCGCCGTCGGACCGCACGTTCGAGATCGAGTTTCTCGATCCCGGCGCCCAGGCCTTCGCCTTCACCTTCGGATAG
PROTEIN sequence
Length: 599
MLLALVSYLGGVLTIVSPCILPILPFVFARADKPFRTSTLPMLVGMTLTFALVASLAAVGGGWAVRANEYGRIAALVLLAAFGVALLLPSLADRLARPLVAAGARLSEAADRQSATGSAVLPSFLLGVATGLLWAPCAGPILGLLLTGAALNGASATTSLLLLAYATGAATSLALALLVGGRAFAAMKRSLGVGEWVRRGLGLAVLCGVVAIAFGLDTGLLTRLSLASTASLEQGLVDKVRPMPAQAASPVMIGSSDMMSGPDAAAPAPAADEAQALPSEGVMPSLNGAVQWLNSPPLTAEGLRGKVVLIDFWTYSCINCLRAIPYVEAWARKYRDQGLVVIGVHAPEFAFERNVANVEKAIRDLGIDYPVAIDNDYAIWRAFNNEYWPAHYFIDAKGRIRHHHFGEGEYDGSEKVIQALLAEAGHAPAAASLVTVDARGVHAAADMANVQSPETYIGYERAENFASPGGADHDRAKRYSAAPSLDLNQWSLGGDWTIGAEAATLNAAEGTLTYRFHARDLHLVLGPGSDGKPVRFKVLVDGKPPQTDHGTDTDADGNGTIVGQRLYQLVRQAGAPSDRTFEIEFLDPGAQAFAFTFG*