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berkeley_reactor_200306_biofilm_scaffold_95231_106

Organism: 2019_SCN_bioreactor_200211_biofilm_Rhizobiales_70_15

near complete RP 48 / 55 BSCG 46 / 51 ASCG 10 / 38 MC: 1
Location: 114103..114786

Top 3 Functional Annotations

Value Algorithm Source
GntR family transcriptional regulator n=1 Tax=Xanthobacteraceae RepID=UPI0003742D96 similarity UNIREF
DB: UNIREF100
  • Identity: 51.6
  • Coverage: 213.0
  • Bit_score: 202
  • Evalue 2.90e-49
Transcriptional regulator, GntR family {ECO:0000313|EMBL:CDX30431.1}; TaxID=1505933 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. ORS3359.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 67.8
  • Coverage: 227.0
  • Bit_score: 291
  • Evalue 8.80e-76
GntR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 52.1
  • Coverage: 213.0
  • Bit_score: 202
  • Evalue 1.10e-49

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Taxonomy

Mesorhizobium sp. ORS3359 → Mesorhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 684
ATGGGCGGCGACCTCGAATTCCTCCAGAACCATTCCCTGACCAGCGTGCTGCGGCGCGAGATCGAGGCGCTGATCCTGTCGGGCGCCTTCGGCCCGGGCGAGCGCCTCAACGAGAACCTGCTCGCCGCGCGCTTCGCCGTCAGCCGCGGGCCGGTGCGCGAGGCCTGCCGGGCCCTGGTCGAGAAGGGCCTGCTCGAGCTCGTCCCCAATCGCGGGGTGTACGTGCGCCGGATCGACGACCGCCAGGCTGCAGAGCTCTACGACCTGCGCGCCGGCCTGTTCGCCACCGCGGCCCGCCTGCTGGCCGCCACCATCACGGACGCCGAGCTGGACGAGCTCGACGCCCTGCTTCTCGGCATGGAGGCGGCCGCGGCGCGGCAGTCGCTGGAGGACTACTATCCGCTCAACCTCGCCTTCCACGAGCGGATCCTGAGCTTTGCCGGCAACGCAAGCCTGCTGGCCGCCTATCGCGAGGCGATCAAGGCGCTGCACCTGTTCCGCGAGCGCGGCCTGCTGCACGGCGGCGGCCTCTCGGTCTCGAACAGCGAGCATCGCGCCATCCTCGAGGCCCTGCGCGGGCACCGGCCGCTCGCCGCCATGGAAGCGGCGTTCCTCCACGTCCAGAACGGTAAGGCGCGGATGATCCTGCCCGGCCGCGAGGACGGACAGACCGGGACGGCCTGA
PROTEIN sequence
Length: 228
MGGDLEFLQNHSLTSVLRREIEALILSGAFGPGERLNENLLAARFAVSRGPVREACRALVEKGLLELVPNRGVYVRRIDDRQAAELYDLRAGLFATAARLLAATITDAELDELDALLLGMEAAAARQSLEDYYPLNLAFHERILSFAGNASLLAAYREAIKALHLFRERGLLHGGGLSVSNSEHRAILEALRGHRPLAAMEAAFLHVQNGKARMILPGREDGQTGTA*