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berkeley_reactor_200306_biofilm_scaffold_95231_107

Organism: 2019_SCN_bioreactor_200211_biofilm_Rhizobiales_70_15

near complete RP 48 / 55 BSCG 46 / 51 ASCG 10 / 38 MC: 1
Location: 114824..115867

Top 3 Functional Annotations

Value Algorithm Source
Uncharacterized protein n=1 Tax=Rhizobium sp. RepID=L0NBH3_RHISP similarity UNIREF
DB: UNIREF100
  • Identity: 60.8
  • Coverage: 309.0
  • Bit_score: 377
  • Evalue 1.30e-101
Uncharacterized protein {ECO:0000313|EMBL:KEQ04210.1}; TaxID=1509405 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. R1-200B4.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 60.6
  • Coverage: 312.0
  • Bit_score: 378
  • Evalue 6.40e-102
putative BUG-like extracytoplasmic solute binding receptor, TTT family similarity KEGG
DB: KEGG
  • Identity: 31.7
  • Coverage: 319.0
  • Bit_score: 151
  • Evalue 3.30e-34

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Taxonomy

Rhizobium sp. R1-200B4 → Rhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1044
ATGACCGCAGACCCGTTCAAGCTCGCCATGGCGCGGCTGGCGATCGCCGCCGCGCTCGGTGCGACGATCCCCGCCGCGCTCGGTGCGACGATCCCCGCCGCGCTCTGCGCGACGATCCCCGCCGCGCTCTGCGCGGCGATCACCGCTCCGGCTCTTGCAGCCGGCAAATATCCGAGCGGCGTCGTGACGCTCGTCACCCATTCCAGCCCGGGCGGCGGCAGCGACGTCTTCCTGCGCGAGATGCTGCCGCATCTGCAGGCGCATCTCGGCGGCACGCTGATCGTGCAGAACATCCAGGGCGGCAGCGGCGCCAAGGCGGTGGCGATCACCGCGTCGGCCCCGCCCGACGGCACGATGCTCTATGCCACCACGCCGACCTACATCTATACCTCGCTGCTCAGCCACCCTGCGGCGACCTACAAGGACCTCGAGCCGCTGGTGAACGTGTTCTACGACCCCGAGGTCGTCTACACCGCCGCCGACTCCGCCTTCCCCGACCTCGCCTCGGTGATCGCGCATGCCAGGGAAGCGCGCGGCAAATGGGGCGCGGCCAACCCGGCCTCGCTCGAGCGCCAGGCGCTCGAGCAGATCAAGCAGAAGACCGGCGTCAACGCCTCGATCGTCACTTTCGAGGGCGGCGGCGACATGCTGATCAACGTGCTCAACCACGGGCTCGACATCGGTGTCGGCGAGGTCGAGGAGATCCGCGCCCAGCTCGATGCCGGCAAGATCCGCCTGCTGGCGGTGCTCGGCGACAAGCGGCTCGACCAGTTCCCCGACCTCAAGACCGCGCGGGAGCAGGGCGTCGACGTCGCGGTGGTCAAGTTCCGCGGCCTCGCCGGCCCGAAGAACACGCCGCCCGAGGTGATCGCCGCCTGGGAGGAGGCCATTCCCAAGCTGCTCGCCGATCCCGCCTACGAGAAAGTCTACCTGGAGAACAATCTCCAGCCCGGCTTCATGAACCATGCCGACTACATCAGGTTCATCGACGGCTTCGGCAGCGACACCACCGCCTTTCTCAGGAAGAGCGGGGTGATCAAATGA
PROTEIN sequence
Length: 348
MTADPFKLAMARLAIAAALGATIPAALGATIPAALCATIPAALCAAITAPALAAGKYPSGVVTLVTHSSPGGGSDVFLREMLPHLQAHLGGTLIVQNIQGGSGAKAVAITASAPPDGTMLYATTPTYIYTSLLSHPAATYKDLEPLVNVFYDPEVVYTAADSAFPDLASVIAHAREARGKWGAANPASLERQALEQIKQKTGVNASIVTFEGGGDMLINVLNHGLDIGVGEVEEIRAQLDAGKIRLLAVLGDKRLDQFPDLKTAREQGVDVAVVKFRGLAGPKNTPPEVIAAWEEAIPKLLADPAYEKVYLENNLQPGFMNHADYIRFIDGFGSDTTAFLRKSGVIK*