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berkeley_reactor_200306_biofilm_scaffold_140837_38

Organism: 2019_SCN_bioreactor_200211_biofilm_Rhizobiales_70_15

near complete RP 48 / 55 BSCG 46 / 51 ASCG 10 / 38 MC: 1
Location: comp(40540..41286)

Top 3 Functional Annotations

Value Algorithm Source
Putative short-chain type dehydrogenase/reductase y4eK {ECO:0000313|EMBL:CDX56481.1}; EC=1.-.-.- {ECO:0000313|EMBL:CDX56481.1};; TaxID=69974 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium plurifarium.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 59.8
  • Coverage: 244.0
  • Bit_score: 292
  • Evalue 3.30e-76
putative short-chain type dehydrogenase/reductase y4eK (EC:1.-.-.-) similarity KEGG
DB: KEGG
  • Identity: 45.8
  • Coverage: 236.0
  • Bit_score: 203
  • Evalue 5.30e-50
Putative short-chain type id=2429417 bin=GWF1_Rhodobacteraceae_65_7 species=Pseudomonas putida genus=Pseudomonas taxon_order=Pseudomonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWF1_Rhodobacteraceae_65_7 organism_group=Alphaproteobacteria organism_desc=Good + similarity UNIREF
DB: UNIREF100
  • Identity: 59.8
  • Coverage: 239.0
  • Bit_score: 279
  • Evalue 2.10e-72

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Taxonomy

Mesorhizobium plurifarium → Mesorhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 747
ATGCCCGCCACGCCTTATCGCACCGCCCTGGTCACCGGCGCTTCGCGCGGCATCGGGGCGGCGCTCTGCCGGCGCCTCGCCGGCCTCGGCCTCACCGTCCATGCCCTGGCGCGCAGCCGCGAGGGCCTGGAGGCGCTGGCCGCCGATGCCGCCATCCGGCCGCTCGTCGCCGACGTCACGGATATCGCGGCCGTCGAGGCGGCGCTGGCGGGAGCCGAGATCGACGTCCTCGTCCACAACGCCGGCGCCGTTGCCTCGGTGCGGCCGCTCTACGAGCAGACGGCGCAGGAGATCGCCGAGACCGTCGCCGTCAACCTGACGGCGCCGCTGCAGCTGATGCGCCTGCTCGTGCCCGGCATGGTGGCCCGGCGGCGCGGCCATGTCGTCAACATCACCACCACGGCGGCCCGCCACGTCTTTGCCGGCACCTCGGCCTATGGCGGGGCCAAGGCGGGCCTCGCCCAGGCCGGGCGGGTGCTGCGCTACGACCTCGCCGGGTCGAACGTGCGGCTGACGGAGGTGGCGCCGGGGCGGGTGGAGACCGAGATCTATCTCAGGGCCTTCGGCGGCGACCGCGGCCGGCTGCAGGGCACGCTTTACAGCGACGTCCGGGCTCTCCAGCCCGAGGACGTGGCCGAGGCCGTCGCCGCCGTGCTGACGCTGCCGGAGCATGTCGACGTCGCCGAGATCGAGGTCTCGCCGACCGACCAGGCGACCGGCGGCCATGTCTATGGCAAGCCCGCCTAG
PROTEIN sequence
Length: 249
MPATPYRTALVTGASRGIGAALCRRLAGLGLTVHALARSREGLEALAADAAIRPLVADVTDIAAVEAALAGAEIDVLVHNAGAVASVRPLYEQTAQEIAETVAVNLTAPLQLMRLLVPGMVARRRGHVVNITTTAARHVFAGTSAYGGAKAGLAQAGRVLRYDLAGSNVRLTEVAPGRVETEIYLRAFGGDRGRLQGTLYSDVRALQPEDVAEAVAAVLTLPEHVDVAEIEVSPTDQATGGHVYGKPA*