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berkeley_reactor_200306_biofilm_scaffold_140837_39

Organism: 2019_SCN_bioreactor_200211_biofilm_Rhizobiales_70_15

near complete RP 48 / 55 BSCG 46 / 51 ASCG 10 / 38 MC: 1
Location: comp(41301..42239)

Top 3 Functional Annotations

Value Algorithm Source
3-hydroxyacyl-CoA dehydrogenase n=1 Tax=Herbaspirillum frisingense GSF30 RepID=R0ELF1_9BURK similarity UNIREF
DB: UNIREF100
  • Identity: 45.1
  • Coverage: 308.0
  • Bit_score: 250
  • Evalue 2.20e-63
3-hydroxyacyl-CoA dehydrogenase {ECO:0000313|EMBL:CDX32495.1}; TaxID=69974 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium plurifarium.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 68.2
  • Coverage: 302.0
  • Bit_score: 394
  • Evalue 1.30e-106
hypothetical protein similarity KEGG
DB: KEGG
  • Identity: 46.0
  • Coverage: 309.0
  • Bit_score: 250
  • Evalue 6.20e-64

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Taxonomy

Mesorhizobium plurifarium → Mesorhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 939
ATGAGCATCTCTCCTAGCGACATCGGGCCGGTCGGCATCGTCGGCTTCGGCACGATCGGCCAGCGCTGGGCCGCCGCCTTCGCCCATGCCGGCCTCGACGTGCGCTGCCACGACCCCGATCCCGGGCAATGGCCGGCGTTCGAGGCCCGTCGCCCCGGCCTCGACGCCGATCTCGATGCGCTGCGGGGCGGCGGCGGACGGCGTGGCGCCGTCACCTTCTCCGCCGACCTGCCGGCCGCGCTCGCCGGGGTCCGCTTCGTCCAGGAATGCGGGCCGGAGCGCCTGGCGCTGAAGCAGACGCTGCTGGCCGGGATCGAAGATGCGGTGGACGAGAGCGTGGTGATCGCCTCCTCTTCCTCCGCCCTGCTGGTGTCGGACATGCAGGCGCAGTGCCGGCATCCCGGCCGGATCGTGCTCGGCCATCCCTTCAACCCGGCGCATCTGATGCCGCTGGTCGAGATCGTCGGCGGCCGTGCCACGGCGCCGGAGGCTCTGGCCCGGGCCCGCGCGGTCTACGAGGCCATCGGCAAGAAGCCGGTGGTGCTGAGCCGCGAGGTCACCGGACACCTGGCGCTGCGCCTGATGGGGGCGATGTGGCGCGAGGCCATCGCGCTGGTGCGCGACGGCGTCGCCTCGGCCGAGGACGTCGACCGCGCCTTCTGCTACGGGCCGGGCCCGAAATGGACGCTGCAGGGCTCGTTCATCTCCAACCACCTCAATGCCGAGGGCATCGAGGCGTTCTTCGCCAAGTACGGCCCGACCTACCAGGCGATCTGGGACGACCTCGGCACGGCGCGGCTGGACGAGGCGACCGTCGCGGCCGTGTCGCAGACGGTGCGCGGCGCCATCGGCGAGCGCACCGATGCCGCGTTGCGCGAGGAGCGCGACCGCGGCCTCGTCGCGATCCTGCGCGCGGTCGACGCCGACGGCGCCCTGTAG
PROTEIN sequence
Length: 313
MSISPSDIGPVGIVGFGTIGQRWAAAFAHAGLDVRCHDPDPGQWPAFEARRPGLDADLDALRGGGGRRGAVTFSADLPAALAGVRFVQECGPERLALKQTLLAGIEDAVDESVVIASSSSALLVSDMQAQCRHPGRIVLGHPFNPAHLMPLVEIVGGRATAPEALARARAVYEAIGKKPVVLSREVTGHLALRLMGAMWREAIALVRDGVASAEDVDRAFCYGPGPKWTLQGSFISNHLNAEGIEAFFAKYGPTYQAIWDDLGTARLDEATVAAVSQTVRGAIGERTDAALREERDRGLVAILRAVDADGAL*