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CN-SCN_Phenylobacterium_14x

CN-SCN_Caulobacterales_69_14
In projects: CN-SCN  |  SCN_92

Consensus taxonomy: Caulobacterales  →  Alphaproteobacteria  →  Proteobacteria  →  Bacteria

Metagenomic Context

Parent: CN-SCN_Unknown

Properties

Avg. coverage: 13.94 Longest contig: 40.95 Kbp Bin length: 2.69 Mbp GC content: 69.19 %
Contigs count: 245 Features count: 2861 rRNAs count: 0 tRNAs count: 30

Genome completeness

near complete RP 44 / 55 MC: 2 BSCG 42 / 51 MC: 2 ASCG 7 / 38

Description

Partial 44

Displaying items 51-100 of 245 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
cn_combo_scaffold_5900 PHE14_77
Order: Caulobacterales (62.5%)
16 10148 bp 68.66 13.59 81.59
cn_combo_scaffold_5970 PHE14_82
Order: Caulobacterales (87.5%)
16 10040 bp 69.25 15.61 90.57
cn_combo_scaffold_6488 PHE14_99
Order: Caulobacterales (81.25%)
16 16429 bp 69.04 12.98 90.04
cn_combo_scaffold_6889 PHE14_105
Order: Caulobacterales (81.25%)
16 15761 bp 70.23 15.23 84.28
cn_combo_scaffold_3250 PHE14_25
Order: Caulobacterales (80%)
15 17605 bp 69.36 15.14 95.48
cn_combo_scaffold_3579 PHE14_31
Order: Caulobacterales (60%)
15 16062 bp 68.30 13.87 89.71
cn_combo_scaffold_4069 PHE14_35
Species: Phenylobacterium zucineum (53.33%)
15 14375 bp 69.79 13.93 91.41
cn_combo_scaffold_5082 PHE14_59
Order: Caulobacterales (80%)
15 14063 bp 69.17 15.20 90.32
cn_combo_scaffold_5586 PHE14_66
Order: Caulobacterales (80%)
15 13341 bp 70.20 14.71 94.31
cn_combo_scaffold_5672 PHE14_68
Species: R_Phenylobacterium_69_31 (53.33%)
15 10513 bp 68.98 14.24 94.48
cn_combo_scaffold_5787 PHE14_71
Order: Caulobacterales (86.67%)
15 10872 bp 71.02 14.66 91.00
cn_combo_scaffold_6381 PHE14_95
Order: Caulobacterales (80%)
15 9475 bp 69.42 14.60 88.56
cn_combo_scaffold_4186 PHE14_38
Order: Caulobacterales (100%)
14 13976 bp 70.47 14.40 95.86
cn_combo_scaffold_4669 PHE14_52
Order: Caulobacterales (85.71%)
14 15158 bp 69.75 12.93 92.24
cn_combo_scaffold_4847 PHE14_57
Order: Caulobacterales (71.43%)
14 12143 bp 70.68 14.68 91.44
cn_combo_scaffold_5307 PHE14_60
Order: Caulobacterales (78.57%)
14 11142 bp 67.43 16.22 86.73
cn_combo_scaffold_5506 PHE14_63
Order: Caulobacterales (78.57%)
14 10803 bp 67.23 12.61 87.92
cn_combo_scaffold_5715 PHE14_70
Species: Phenylobacterium zucineum (50%)
14 10445 bp 69.63 14.66 96.02
cn_combo_scaffold_5957 PHE14_81
Order: Caulobacterales (57.14%)
14 10061 bp 69.64 14.61 90.38
cn_combo_scaffold_6029 PHE14_84
Order: Caulobacterales (92.86%)
14 13386 bp 69.74 14.25 89.76
cn_combo_scaffold_12915 PHE14_243
Order: Caulobacterales (53.85%)
13 7857 bp 66.48 10.83 90.11
cn_combo_scaffold_4336 PHE14_42
Order: Caulobacterales (76.92%)
13 13485 bp 70.73 14.45 91.50
cn_combo_scaffold_4629 PHE14_50
Class: Alphaproteobacteria (76.92%)
13 12711 bp 70.76 14.71 95.28
cn_combo_scaffold_4837 PHE14_56
Order: Caulobacterales (84.62%)
13 12172 bp 68.37 12.78 93.34
cn_combo_scaffold_5582 PHE14_65
Order: Caulobacterales (92.31%)
13 13674 bp 70.23 15.30 89.07
cn_combo_scaffold_5948 PHE14_79
Order: Caulobacterales (69.23%)
13 10074 bp 67.03 14.06 84.67
cn_combo_scaffold_5951 PHE14_80
Order: Caulobacterales (69.23%)
13 10065 bp 70.40 13.84 89.03
cn_combo_scaffold_6147 PHE14_86
Order: Caulobacterales (61.54%)
13 9803 bp 70.13 14.90 95.66
cn_combo_scaffold_8646 PHE14_238
Class: Alphaproteobacteria (53.85%)
13 7251 bp 69.59 14.12 84.57
cn_combo_scaffold_8122 PHE14_132
Order: Caulobacterales (61.54%)
13 7657 bp 67.77 13.74 88.59
cn_combo_scaffold_4600 PHE14_49
Order: Caulobacterales (50%)
12 13308 bp 65.97 11.79 88.83
cn_combo_scaffold_4829 PHE14_55
Order: Caulobacterales (66.67%)
12 12185 bp 69.01 15.41 94.20
cn_combo_scaffold_4870 PHE14_58
Order: Caulobacterales (83.33%)
12 12089 bp 69.85 13.56 98.30
cn_combo_scaffold_6060 PHE14_85
Order: Caulobacterales (91.67%)
12 13863 bp 69.34 14.64 92.73
cn_combo_scaffold_6686 PHE14_102
Order: Caulobacterales (83.33%)
12 9104 bp 70.44 15.34 85.08
cn_combo_scaffold_7592 PHE14_120
Order: Caulobacterales (75%)
12 11096 bp 69.78 14.64 91.71
cn_combo_scaffold_12395 PHE14_215
Order: Caulobacterales (72.73%)
11 8930 bp 69.00 14.11 89.90
cn_combo_scaffold_13147 PHE14_220
Genus: Caulobacter (54.55%)
11 7476 bp 71.20 13.23 81.94
cn_combo_scaffold_4507 PHE14_45
Species: Arenimonas composti (54.55%)
11 13025 bp 68.94 14.24 93.12
cn_combo_scaffold_4637 PHE14_51
Order: Caulobacterales (90.91%)
11 13319 bp 67.35 12.68 81.65
cn_combo_scaffold_5794 PHE14_72
Species: R_Phenylobacterium_70_10 (63.64%)
11 10324 bp 70.56 14.02 93.05
cn_combo_scaffold_5844 PHE14_75
Order: Caulobacterales (100%)
11 10247 bp 67.42 14.60 89.38
cn_combo_scaffold_5977 PHE14_83
Order: Caulobacterales (90.91%)
11 10023 bp 68.61 13.04 88.15
cn_combo_scaffold_6328 PHE14_92
Order: Caulobacterales (81.82%)
11 9546 bp 70.23 14.98 91.86
cn_combo_scaffold_6405 PHE14_96
Order: Caulobacterales (90.91%)
11 9435 bp 70.84 14.54 93.42
cn_combo_scaffold_6451 PHE14_98
Order: Caulobacterales (81.82%)
11 9372 bp 70.70 13.55 96.03
cn_combo_scaffold_6671 PHE14_101
Order: Caulobacterales (90.91%)
11 9116 bp 67.41 14.24 89.18
cn_combo_scaffold_6978 PHE14_106
Order: Caulobacterales (90.91%)
11 8758 bp 69.92 14.71 88.24
cn_combo_scaffold_7475 PHE14_118
Species: Phenylobacterium zucineum (54.55%)
11 8240 bp 69.93 14.22 92.18
cn_combo_scaffold_7880 PHE14_126
Genus: Caulobacter (54.55%)
11 7858 bp 71.29 14.23 89.26
Displaying items 51-100 of 245 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.