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CN-SCN_Phenylobacterium_14x

CN-SCN_Caulobacterales_69_14
In projects: CN-SCN  |  SCN_92

Consensus taxonomy: Caulobacterales  →  Alphaproteobacteria  →  Proteobacteria  →  Bacteria

Metagenomic Context

Parent: CN-SCN_Unknown

Properties

Avg. coverage: 13.94 Longest contig: 40.95 Kbp Bin length: 2.69 Mbp GC content: 69.19 %
Contigs count: 245 Features count: 2861 rRNAs count: 0 tRNAs count: 30

Genome completeness

near complete RP 44 / 55 MC: 2 BSCG 42 / 51 MC: 2 ASCG 7 / 38

Description

Partial 44

Displaying items 151-200 of 245 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
cn_combo_scaffold_5970 PHE14_82
Order: Caulobacterales (87.5%)
16 10040 bp 69.25 15.61 90.57
cn_combo_scaffold_5957 PHE14_81
Order: Caulobacterales (57.14%)
14 10061 bp 69.64 14.61 90.38
cn_combo_scaffold_5951 PHE14_80
Order: Caulobacterales (69.23%)
13 10065 bp 70.40 13.84 89.03
cn_combo_scaffold_5948 PHE14_79
Order: Caulobacterales (69.23%)
13 10074 bp 67.03 14.06 84.67
cn_combo_scaffold_5902 PHE14_78
Order: Caulobacterales (100%)
8 10146 bp 69.99 14.13 94.50
cn_combo_scaffold_5900 PHE14_77
Order: Caulobacterales (62.5%)
16 10148 bp 68.66 13.59 81.59
cn_combo_scaffold_5883 PHE14_76
Species: Phenylobacterium zucineum (55.56%)
9 10177 bp 71.69 14.03 93.76
cn_combo_scaffold_5844 PHE14_75
Order: Caulobacterales (100%)
11 10247 bp 67.42 14.60 89.38
cn_combo_scaffold_10587 PHE14_182
Order: Caulobacterales (100%)
8 10271 bp 68.82 15.60 95.57
cn_combo_scaffold_5819 PHE14_73
Order: Caulobacterales (66.67%)
9 10283 bp 67.85 14.96 94.32
cn_combo_scaffold_5811 PHE14_232
Genus: Sphingobium (57.14%)
7 10299 bp 68.83 10.27 99.33
cn_combo_scaffold_5794 PHE14_72
Species: R_Phenylobacterium_70_10 (63.64%)
11 10324 bp 70.56 14.02 93.05
cn_combo_scaffold_5715 PHE14_70
Species: Phenylobacterium zucineum (50%)
14 10445 bp 69.63 14.66 96.02
cn_combo_scaffold_7346 PHE14_115
Species: R_Phenylobacterium_70_10 (50%)
10 10462 bp 68.62 13.39 92.85
cn_combo_scaffold_5684 PHE14_69
Order: Caulobacterales (87.5%)
8 10498 bp 70.47 14.07 91.36
cn_combo_scaffold_5672 PHE14_68
Species: R_Phenylobacterium_69_31 (53.33%)
15 10513 bp 68.98 14.24 94.48
cn_combo_scaffold_5628 PHE14_67
Order: Caulobacterales (88.89%)
9 10590 bp 69.89 14.63 94.59
cn_combo_scaffold_5528 PHE14_64
Order: Caulobacterales (90%)
10 10784 bp 71.81 13.26 95.84
cn_combo_scaffold_5506 PHE14_63
Order: Caulobacterales (78.57%)
14 10803 bp 67.23 12.61 87.92
cn_combo_scaffold_5787 PHE14_71
Order: Caulobacterales (86.67%)
15 10872 bp 71.02 14.66 91.00
cn_combo_scaffold_5337 PHE14_62
Species: R_Phenylobacterium_69_31 (55.56%)
9 11082 bp 69.77 14.26 95.70
cn_combo_scaffold_7592 PHE14_120
Order: Caulobacterales (75%)
12 11096 bp 69.78 14.64 91.71
cn_combo_scaffold_5310 PHE14_61
Order: Caulobacterales (90%)
10 11136 bp 68.01 13.89 89.47
cn_combo_scaffold_5307 PHE14_60
Order: Caulobacterales (78.57%)
14 11142 bp 67.43 16.22 86.73
cn_combo_scaffold_8742 PHE14_137
Order: Caulobacterales (100%)
10 11944 bp 69.65 14.02 83.82
cn_combo_scaffold_4870 PHE14_58
Order: Caulobacterales (83.33%)
12 12089 bp 69.85 13.56 98.30
cn_combo_scaffold_4847 PHE14_57
Order: Caulobacterales (71.43%)
14 12143 bp 70.68 14.68 91.44
cn_combo_scaffold_4837 PHE14_56
Order: Caulobacterales (84.62%)
13 12172 bp 68.37 12.78 93.34
cn_combo_scaffold_4829 PHE14_55
Order: Caulobacterales (66.67%)
12 12185 bp 69.01 15.41 94.20
cn_combo_scaffold_9819 PHE14_162
Order: Caulobacterales (100%)
16 12294 bp 69.61 13.85 95.39
cn_combo_scaffold_4629 PHE14_50
Class: Alphaproteobacteria (76.92%)
13 12711 bp 70.76 14.71 95.28
cn_combo_scaffold_4576 PHE14_46
Order: Caulobacterales (52.63%)
19 12863 bp 67.08 12.67 88.49
cn_combo_scaffold_4507 PHE14_45
Species: Arenimonas composti (54.55%)
11 13025 bp 68.94 14.24 93.12
cn_combo_scaffold_4465 PHE14_43
Order: Caulobacterales (88.24%)
17 13150 bp 69.25 14.76 94.27
cn_combo_scaffold_4597 PHE14_47
Order: Caulobacterales (52.94%)
17 13208 bp 66.70 11.35 90.38
cn_combo_scaffold_4600 PHE14_49
Order: Caulobacterales (50%)
12 13308 bp 65.97 11.79 88.83
cn_combo_scaffold_4637 PHE14_51
Order: Caulobacterales (90.91%)
11 13319 bp 67.35 12.68 81.65
cn_combo_scaffold_5586 PHE14_66
Order: Caulobacterales (80%)
15 13341 bp 70.20 14.71 94.31
cn_combo_scaffold_6029 PHE14_84
Order: Caulobacterales (92.86%)
14 13386 bp 69.74 14.25 89.76
cn_combo_scaffold_4336 PHE14_42
Order: Caulobacterales (76.92%)
13 13485 bp 70.73 14.45 91.50
cn_combo_scaffold_5582 PHE14_65
Order: Caulobacterales (92.31%)
13 13674 bp 70.23 15.30 89.07
cn_combo_scaffold_4244 PHE14_40
Order: Caulobacterales (100%)
17 13795 bp 70.15 15.06 88.31
cn_combo_scaffold_6060 PHE14_85
Order: Caulobacterales (91.67%)
12 13863 bp 69.34 14.64 92.73
cn_combo_scaffold_4592 PHE14_48
Order: Caulobacterales (100%)
18 13938 bp 69.90 14.45 90.98
cn_combo_scaffold_4186 PHE14_38
Order: Caulobacterales (100%)
14 13976 bp 70.47 14.40 95.86
cn_combo_scaffold_4183 PHE14_36
Species: R_Phenylobacterium_70_10 (50%)
16 13984 bp 70.22 14.25 88.34
cn_combo_scaffold_5082 PHE14_59
Order: Caulobacterales (80%)
15 14063 bp 69.17 15.20 90.32
cn_combo_scaffold_4069 PHE14_35
Species: Phenylobacterium zucineum (53.33%)
15 14375 bp 69.79 13.93 91.41
cn_combo_scaffold_6142 PHE14_87
Order: Caulobacterales (61.11%)
18 14442 bp 63.58 10.25 67.66
cn_combo_scaffold_4669 PHE14_52
Order: Caulobacterales (85.71%)
14 15158 bp 69.75 12.93 92.24
Displaying items 151-200 of 245 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.