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scnpilot_p_inoc_scaffold_56

Search features with annotation key words

Displaying items 61-90 of 419 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_56_61
RIFOXYA1_FULL_Xanthomonadales_69_10_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(64618..65091)
DNA (474bp) protein (158aa)
Poly granule associated protein n=1 Tax=Acidovorax sp. NO-1 RepID=H0C4I2_9BURK
polyhydroxyalcanoate granule-associated protein Tax=RIFOXYA1_FULL_Xanthomonadales_69_10_curated
poly granule associated protein
scnpilot_p_inoc_scaffold_56_62
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(65247..65951)
DNA (705bp) protein (235aa)
Leucyl/phenylalanyl-tRNA--protein transferase {ECO:0000256|HAMAP-Rule:MF_00688, ECO:0000256|SAAS:SAAS00088489}; EC=2.3.2.6 {ECO:0000256|HAMAP-Rule:MF_00688, ECO:0000256|SAAS:SAAS00088482};; L/F-transf
Leucyl/phenylalanyl-tRNA--protein transferase n=1 Tax=Rhodanobacter sp. 115 RepID=I4W0M8_9GAMM
leucyl/phenylalanyl-tRNA--protein transferase
scnpilot_p_inoc_scaffold_56_63
Oleiagrimonas soli, Oleiagrimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(65954..67141)
DNA (1188bp) protein (396aa)
hypothetical protein n=1 Tax=Dyella japonica RepID=UPI000311F2CA rbh
Uncharacterized protein {ECO:0000313|EMBL:KGI77438.1}; TaxID=1543381 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Oleiagrimonas.;" source="Oleiagrimonas s
hypothetical protein
scnpilot_p_inoc_scaffold_56_64
Terrabacter sp. 28, Terrabacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

67238..68575
DNA (1338bp) protein (446aa)
adenylyl cyclase n=1 Tax=Ornithinimicrobium pekingense RepID=UPI0003B4FFAB rbh
Uncharacterized protein {ECO:0000313|EMBL:KJK11492.1}; TaxID=1619947 species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Terrabacter.;" source="Terrabacter sp. 28.;"
adenylate/guanylate cyclase
scnpilot_p_inoc_scaffold_56_65
Oleiagrimonas soli, Oleiagrimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(68588..69550)
DNA (963bp) protein (321aa)
Thioredoxin reductase {ECO:0000256|RuleBase:RU003881}; EC=1.8.1.9 {ECO:0000256|RuleBase:RU003881};; TaxID=1543381 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadac
Thioredoxin reductase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W729_9GAMM
thioredoxin-disulfide reductase
scnpilot_p_inoc_scaffold_56_66
Luteibacter yeojuensis, Luteibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

69765..70832
DNA (1068bp) protein (356aa)
Alanine dehydrogenase n=1 Tax=mine drainage metagenome RepID=T1A9Q9_9ZZZZ
Alanine dehydrogenase {ECO:0000313|EMBL:KJV32539.1}; TaxID=345309 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Luteibacter.;" source="Luteibacter yeojuens
alanine dehydrogenase
scnpilot_p_inoc_scaffold_56_67
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

71647..73941
DNA (2295bp) protein (765aa)
DNA segregation ATPase FtsK n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W731_9GAMM
DNA segregation ATPase FtsK {ECO:0000313|EMBL:EIL95272.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobact
DNA segregation ATPase, FtsK/SpoIIIE family
scnpilot_p_inoc_scaffold_56_68

Not on your lists

74017..74670
DNA (654bp) protein (218aa)
Lipoprotein chaperone n=1 Tax=Rhodanobacter denitrificans RepID=I4WXA7_9GAMM
Marine sediment metagenome DNA, contig: S03H2_L01291 {ECO:0000313|EMBL:GAH46909.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marin
cell envelope biogenesis protein LolA
scnpilot_p_inoc_scaffold_56_69
Oleiagrimonas soli, Oleiagrimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

74720..76060
DNA (1341bp) protein (447aa)
Recombination factor protein RarA n=1 Tax=Rhodanobacter denitrificans RepID=I4WXB6_9GAMM
Recombination factor protein RarA {ECO:0000313|EMBL:KGI77431.1}; TaxID=1543381 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Oleiagrimonas.;" source="Oleia
recombination factor protein RarA
scnpilot_p_inoc_scaffold_56_70
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(76112..76951)
DNA (840bp) protein (280aa)
Putative Glycosyl transferase, group 2 family protein {ECO:0000313|EMBL:KFC74603.1}; EC=2.-.-.- {ECO:0000313|EMBL:KFC74603.1};; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rh
hypothetical protein n=1 Tax=Chelatococcus sp. GW1 RepID=UPI0002F13DBE
glycosyl transferase family protein
scnpilot_p_inoc_scaffold_56_71
Streptosporangium roseum, Streptosporangium, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(76944..77351)
DNA (408bp) protein (136aa)
Uncharacterized protein n=1 Tax=Streptosporangium roseum (strain ATCC 12428 / DSM 43021 / JCM 3005 / NI 9100) RepID=D2BAR8_STRRD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACZ89898.1}; TaxID=479432 species="Bacteria; Actinobacteria; Streptosporangiales; Streptosporangiaceae; Streptosporangium.;" source="Streptosporangium roseum
scnpilot_p_inoc_scaffold_56_72
Bradyrhizobium sp. STM 3809, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(77355..78854)
DNA (1500bp) protein (500aa)
Putative 3-polyprenyl-4-hydroxybenzoate decarboxylase n=1 Tax=Bradyrhizobium sp. STM 3809 RepID=H0SU51_9BRAD rbh
UbiD family decarboxylase
Putative 3-polyprenyl-4-hydroxybenzoate decarboxylase {ECO:0000313|EMBL:CCD97728.1}; TaxID=551936 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium
scnpilot_p_inoc_scaffold_56_73
Catenulispora acidiphila, Catenulispora, Catenulisporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(78949..79542)
DNA (594bp) protein (198aa)
Aromatic acid decarboxylase {ECO:0000256|RuleBase:RU362054}; EC=4.1.1.- {ECO:0000256|RuleBase:RU362054};; TaxID=479433 species="Bacteria; Actinobacteria; Catenulisporales; Catenulisporaceae; Catenulis
3-octaprenyl-4-hydroxybenzoate carboxy-lyase n=1 Tax=Catenulispora acidiphila (strain DSM 44928 / NRRL B-24433 / NBRC 102108 / JCM 14897) RepID=C7QBT9_CATAD
3-octaprenyl-4-hydroxybenzoate carboxy-lyase
scnpilot_p_inoc_scaffold_56_74
Oleiagrimonas soli, Oleiagrimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(79693..80229)
DNA (537bp) protein (179aa)
Transcriptional repressor MprA (Fragment) n=1 Tax=mine drainage metagenome RepID=T1BR46_9ZZZZ
Uncharacterized protein {ECO:0000313|EMBL:KGI78121.1}; TaxID=1543381 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Oleiagrimonas.;" source="Oleiagrimonas s
MarR family transcriptional regulator
scnpilot_p_inoc_scaffold_56_75
RLO_Deltaproteobacteria_60_16, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(80233..80829)
DNA (597bp) protein (199aa)
Sortase-like acyltransferase n=1 Tax=Terriglobus roseus (strain DSM 18391 / NRRL B-41598 / KBS 63) RepID=I3ZMD8_TERRK
N-acetyltransferase GCN5 Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_16_curated
sortase
scnpilot_p_inoc_scaffold_56_76
Nitrosococcus watsonii, Nitrosococcus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

80916..81548
DNA (633bp) protein (211aa)
NmrA family protein n=1 Tax=Nitrosococcus watsoni (strain C-113) RepID=D8KAK7_NITWC rbh
NmrA family protein
NmrA family protein {ECO:0000313|EMBL:ADJ29434.1}; TaxID=105559 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Chromatiaceae; Nitrosococcus.;" source="Nitrosococcus watsoni (str
scnpilot_p_inoc_scaffold_56_77
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

81799..82182
DNA (384bp) protein (128aa)
Uncharacterized protein n=2 Tax=Rhodospirillum rubrum RepID=Q2RTD7_RHORT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:KIZ47584.1}; TaxID=1076 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas p
scnpilot_p_inoc_scaffold_56_78
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(82207..82692)
DNA (486bp) protein (162aa)
Uncharacterized protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VU47_9GAMM
hypothetical protein Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
hypothetical protein
scnpilot_p_inoc_scaffold_56_79
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

82884..83990
DNA (1107bp) protein (369aa)
Signal transduction histidine kinase LytS n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VU49_9GAMM rbh
Signal transduction histidine kinase LytS {ECO:0000313|EMBL:EIL90740.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" sourc
ATPase
scnpilot_p_inoc_scaffold_56_80
Mizugakiibacter sediminis, Mizugakiibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

83993..84742
DNA (750bp) protein (250aa)
hypothetical protein n=1 Tax=Dyella japonica RepID=UPI0002D7B975 rbh
LytTR family two component transcriptional regulator {ECO:0000313|EMBL:GAN44963.1}; TaxID=1475481 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Mizugakiiba
LytTR family two component transcriptional regulator
scnpilot_p_inoc_scaffold_56_81
Mizugakiibacter sediminis, Mizugakiibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

84868..85896
DNA (1029bp) protein (343aa)
hypothetical protein n=1 Tax=Dyella japonica RepID=UPI00030D11F6
Uncharacterized protein {ECO:0000313|EMBL:GAN44959.1}; TaxID=1475481 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Mizugakiibacter.;" source="Mizugakiibact
hypothetical protein
scnpilot_p_inoc_scaffold_56_82
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

86089..87069
DNA (981bp) protein (327aa)
Uncharacterized protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VU59_9GAMM rbh
Uncharacterized protein {ECO:0000313|EMBL:EIL90750.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter s
periplasmic component of the Tol biopolymer transport system
scnpilot_p_inoc_scaffold_56_83
Dyella japonica, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

87147..88064
DNA (918bp) protein (306aa)
hypothetical protein n=1 Tax=Dyella japonica RepID=UPI00030D11F6
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIF46718.1}; TaxID=1217721 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella japonica A8.;"
scnpilot_p_inoc_scaffold_56_84
R_Gammaproteobacteria_63_22, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

88173..88754
DNA (582bp) protein (194aa)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI0003769D12
hypothetical protein Tax=RIFCSPHIGHO2_12_FULL_Gammaproteobacteria_63_22_curated
hypothetical protein
scnpilot_p_inoc_scaffold_56_85
Dyella jiangningensis, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

88860..90152
DNA (1293bp) protein (431aa)
Serine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00176}; EC=6.1.1.11 {ECO:0000256|HAMAP-Rule:MF_00176};; Seryl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00176}; Seryl-tRNA(Ser/Sec) synthetase {ECO:0000
seryl-tRNA synthetase n=1 Tax=Dyella ginsengisoli RepID=UPI00034C809B rbh
seryl-tRNA synthetase
scnpilot_p_inoc_scaffold_56_86
Methylobacterium nodulans, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

90565..92859
DNA (2295bp) protein (765aa)
Oxidoreductase alpha (Molybdopterin) subunit n=1 Tax=Methylobacterium nodulans (strain ORS2060 / LMG 21967) RepID=B8IHG3_METNO rbh
oxidoreductase alpha (molybdopterin) subunit
Oxidoreductase alpha (Molybdopterin) subunit {ECO:0000313|EMBL:ACL61626.1}; TaxID=460265 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" s
scnpilot_p_inoc_scaffold_56_87
Dyella japonica, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(93084..93665)
DNA (582bp) protein (194aa)
FMN-dependent NADH-azoreductase {ECO:0000256|HAMAP-Rule:MF_01216}; EC=1.7.-.- {ECO:0000256|HAMAP-Rule:MF_01216};; Azo-dye reductase {ECO:0000256|HAMAP-Rule:MF_01216}; FMN-dependent NADH-azo compound o
hypothetical protein n=1 Tax=Dyella japonica RepID=UPI0002D90638
FMN-dependent NADH-azoreductase
scnpilot_p_inoc_scaffold_56_88
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

93777..94700
DNA (924bp) protein (308aa)
Transcriptional regulator n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VW78_9GAMM rbh
Transcriptional regulator {ECO:0000313|EMBL:EIL91469.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter
transcriptional regulator
scnpilot_p_inoc_scaffold_56_89

Not on your lists

94771..95916
DNA (1146bp) protein (382aa)
aminotransferase n=1 Tax=Rudaea cellulosilytica RepID=UPI000378ADB5
Aminotransferase class I and II {ECO:0000313|EMBL:EQD70959.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
methionine aminotransferase
scnpilot_p_inoc_scaffold_56_90
Pseudoxanthomonas suwonensis, Pseudoxanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

95973..96767
DNA (795bp) protein (265aa)
Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase n=1 Tax=Pseudoxanthomonas suwonensis (strain 11-1) RepID=E6WSW7_PSEUU
nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase
Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase {ECO:0000313|EMBL:ADV27123.1}; TaxID=743721 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae;
Displaying items 61-90 of 419 in total

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