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scnpilot_p_inoc_scaffold_1555

Search features with annotation key words

Displaying 26 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_1555_1
Altererythrobacter atlanticus, Altererythrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2..622
DNA (621bp) protein (207aa)
Protein-L-isoaspartate O-methyltransferase {ECO:0000313|EMBL:AKH43314.1}; EC=2.1.1.77 {ECO:0000313|EMBL:AKH43314.1};; TaxID=1267766 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonad
Protein-L-isoaspartate O-methyltransferase n=1 Tax=Sphingomonas sp. LH128 RepID=J8VUK7_9SPHN
protein-L-isoaspartate O-methyltransferase
scnpilot_p_inoc_scaffold_1555_2
Novosphingobium tardaugens, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

625..2064
DNA (1440bp) protein (480aa)
TolC-like protein n=1 Tax=Novosphingobium tardaugens NBRC 16725 RepID=U2ZU73_9SPHN rbh
TolC-like protein {ECO:0000313|EMBL:GAD48914.1}; TaxID=1219035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium t
Type I secretion outer membrane protein, TolC
scnpilot_p_inoc_scaffold_1555_3
Novosphingobium tardaugens, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2085..2525
DNA (441bp) protein (147aa)
Uncharacterized protein n=1 Tax=Novosphingobium tardaugens NBRC 16725 RepID=U2YK62_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:GAD48915.1}; TaxID=1219035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingo
hypothetical protein
scnpilot_p_inoc_scaffold_1555_4
Altererythrobacter atlanticus, Altererythrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2538..2906
DNA (369bp) protein (123aa)
Ferredoxin, 2Fe-2S, putative n=1 Tax=Novosphingobium pentaromativorans US6-1 RepID=G6EBF6_9SPHN
ferredoxin
Ferredoxin, 2Fe-2S {ECO:0000313|EMBL:AKH43317.1}; TaxID=1267766 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Altererythrobacter.;" source="Altererythro
scnpilot_p_inoc_scaffold_1555_5
Altererythrobacter atlanticus, Altererythrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2903..3202)
DNA (300bp) protein (100aa)
Uncharacterized protein n=1 Tax=Novosphingobium tardaugens NBRC 16725 RepID=U3A2E0_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:AKH43318.1}; TaxID=1267766 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Altererythrobacter.;" source="Alterer
hypothetical protein
scnpilot_p_inoc_scaffold_1555_6
Novosphingobium sp. Rr 2-17, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3385..3813
DNA (429bp) protein (143aa)
Uncharacterized protein n=1 Tax=Novosphingobium sp. Rr 2-17 RepID=I9WDX9_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:EIZ78383.1}; TaxID=555793 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingob
hypothetical protein
scnpilot_p_inoc_scaffold_1555_7
Erythrobacter sp. JL475, Erythrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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3845..4174
DNA (330bp) protein (110aa)
Uncharacterized protein n=1 Tax=Erythrobacter sp. NAP1 RepID=A3WFY0_9SPHN
Heme biosynthesis protein HemY {ECO:0000313|EMBL:KEO85809.1}; TaxID=383381 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Erythrobacter.;" source="Erythr
HesB/YadR/YfhF
scnpilot_p_inoc_scaffold_1555_8
Novosphingobium subterraneum, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4180..4953
DNA (774bp) protein (258aa)
Exodeoxyribonuclease III {ECO:0000313|EMBL:KHS47781.1}; EC=3.1.11.2 {ECO:0000313|EMBL:KHS47781.1};; TaxID=48936 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadac
exodeoxyribonuclease III (EC:3.1.11.2)
Exodeoxyribonuclease III n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=Q2GC18_NOVAD
scnpilot_p_inoc_scaffold_1555_9
Erythrobacter sp. JL475, Erythrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5027..5758)
DNA (732bp) protein (244aa)
Putative hydrolase n=1 Tax=Novosphingobium tardaugens NBRC 16725 RepID=U2YKT6_9SPHN
Hydrolase {ECO:0000313|EMBL:KEO85811.1}; TaxID=383381 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Erythrobacter.;" source="Erythrobacter sp. JL475.;"
hypothetical protein
scnpilot_p_inoc_scaffold_1555_10
Altererythrobacter atlanticus, Altererythrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5900..6241)
DNA (342bp) protein (114aa)
Uncharacterized protein n=1 Tax=Sphingomonas sp. LH128 RepID=J8SKU3_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:AKH43323.1}; TaxID=1267766 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Altererythrobacter.;" source="Alterer
hypothetical protein
scnpilot_p_inoc_scaffold_1555_11
Altererythrobacter atlanticus, Altererythrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6263..6724)
DNA (462bp) protein (154aa)
Uncharacterized protein n=1 Tax=Novosphingobium tardaugens NBRC 16725 RepID=U2ZU80_9SPHN
Thioesterase superfamily protein {ECO:0000313|EMBL:AKH43324.1}; TaxID=1267766 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Altererythrobacter.;" source
hypothetical protein
scnpilot_p_inoc_scaffold_1555_12
Novosphingobium tardaugens, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6735..7196)
DNA (462bp) protein (154aa)
Putative phosphotransferase system enzyme IIA component n=1 Tax=Novosphingobium tardaugens NBRC 16725 RepID=U2YK68_9SPHN
Putative phosphotransferase system enzyme IIA component {ECO:0000313|EMBL:GAD48925.1}; TaxID=1219035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosp
nitrogen regulatory IIA
scnpilot_p_inoc_scaffold_1555_13
Erythrobacter litoralis, Erythrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7342..7911)
DNA (570bp) protein (190aa)
Ribosome-associated protein Y n=1 Tax=Erythrobacter litoralis (strain HTCC2594) RepID=Q2N6K4_ERYLH
ribosome-associated protein Y
Ribosome-associated protein Y {ECO:0000313|EMBL:ABC64687.1}; TaxID=314225 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Erythrobacter.;" source="Erythro
scnpilot_p_inoc_scaffold_1555_14
Novosphingobium tardaugens, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7953..8639)
DNA (687bp) protein (229aa)
DNA polymerase III subunit epsilon (EC:2.7.7.7)
DNA polymerase III subunit epsilon n=1 Tax=Novosphingobium tardaugens NBRC 16725 RepID=U2YKU0_9SPHN
DNA polymerase III subunit epsilon {ECO:0000313|EMBL:GAD48927.1}; TaxID=1219035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="
scnpilot_p_inoc_scaffold_1555_15
Altererythrobacter atlanticus, Altererythrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8682..9278)
DNA (597bp) protein (199aa)
Dephospho-CoA kinase {ECO:0000313|EMBL:AKH43328.1}; EC=2.7.1.24 {ECO:0000313|EMBL:AKH43328.1};; TaxID=1267766 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacterace
coaE; dephospho-CoA kinase (EC:2.7.1.24)
Dephospho-CoA kinase n=1 Tax=Novosphingobium tardaugens NBRC 16725 RepID=U3A2E9_9SPHN
scnpilot_p_inoc_scaffold_1555_16
Novosphingobium tardaugens, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9275..10144)
DNA (870bp) protein (290aa)
Shikimate dehydrogenase (NADP(+)) {ECO:0000256|HAMAP-Rule:MF_00222, ECO:0000256|SAAS:SAAS00228653}; Short=SDH {ECO:0000256|HAMAP-Rule:MF_00222};; EC=1.1.1.25 {ECO:0000256|HAMAP-Rule:MF_00222, ECO:0000
shikimate dehydrogenase (EC:1.1.1.25)
Shikimate dehydrogenase n=1 Tax=Novosphingobium tardaugens NBRC 16725 RepID=U2ZU84_9SPHN rbh
scnpilot_p_inoc_scaffold_1555_17
Novosphingobium sp. AP12, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10141..10686)
DNA (546bp) protein (182aa)
Maf-like protein PMI02_04197 n=1 Tax=Novosphingobium sp. AP12 RepID=J2G1D6_9SPHN
Maf-like protein PMI02_04197 {ECO:0000256|HAMAP-Rule:MF_00528}; Flags: Precursor;; TaxID=1144305 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphing
Maf-like protein
scnpilot_p_inoc_scaffold_1555_18
Novosphingobium sp. MD-1, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10736..11575)
DNA (840bp) protein (280aa)
Putative pyruvate, phosphate dikinase regulatory protein {ECO:0000256|HAMAP-Rule:MF_00921}; Short=PPDK regulatory protein {ECO:0000256|HAMAP-Rule:MF_00921};; EC=2.7.11.32 {ECO:0000256|HAMAP-Rule:MF_00
Putative pyruvate, phosphate dikinase regulatory protein n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=PDRP_NOVAD rbh
hypothetical protein
scnpilot_p_inoc_scaffold_1555_19
Novosphingobium resinovorum, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11927..12952
DNA (1026bp) protein (342aa)
Uroporphyrinogen decarboxylase {ECO:0000256|HAMAP-Rule:MF_00218, ECO:0000256|RuleBase:RU000554}; Short=UPD {ECO:0000256|HAMAP-Rule:MF_00218};; Short=URO-D {ECO:0000256|HAMAP-Rule:MF_00218};; EC=4.1.1.
hemE; uroporphyrinogen decarboxylase (EC:4.1.1.37)
uroporphyrinogen decarboxylase n=1 Tax=Novosphingobium sp. B-7 RepID=UPI0003B47474 rbh
scnpilot_p_inoc_scaffold_1555_20
BJP_IG2103_Bacteroidetes_41_9, Bacteroidetes, Bacteria

Not on your lists

comp(12958..14901)
DNA (1944bp) protein (648aa)
ADP-ribosylglycohydrolase id=2717649 bin=GWF2_Bacteroidetes_40_13 species=unknown genus=Bacteroides taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_40_13 organism_group=Bacteroidetes rbh
ADP-ribosylglycohydrolase
Tax=BJP_IG2103_Bacteroidetes_41_9
scnpilot_p_inoc_scaffold_1555_21
Novosphingobium sp. MD-1, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15070..15495
DNA (426bp) protein (142aa)
Uncharacterized protein n=1 Tax=Novosphingobium tardaugens NBRC 16725 RepID=U3A2F3_9SPHN
Protoporphyrinogen IX oxidase, novel form, hemJ {ECO:0000313|EMBL:GAO54355.1}; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobiu
hypothetical protein
scnpilot_p_inoc_scaffold_1555_22
Altererythrobacter atlanticus, Altererythrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15698..16954
DNA (1257bp) protein (419aa)
Transcription termination factor Rho n=1 Tax=Novosphingobium tardaugens NBRC 16725 RepID=U2ZU89_9SPHN rbh
Uncharacterized protein {ECO:0000313|EMBL:AKH43334.1}; TaxID=1267766 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Altererythrobacter.;" source="Alterer
rho; transcription termination factor Rho
scnpilot_p_inoc_scaffold_1555_23
BJP_IG2102_Porphyrobacter_62_18, Porphyrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16963..17505
DNA (543bp) protein (181aa)
hypothetical protein n=1 Tax=Citromicrobium sp. JLT1363 RepID=UPI000225DE5B
hypothetical protein
Tax=BJP_IG2102_Porphyrobacter_62_18
scnpilot_p_inoc_scaffold_1555_24
Sphingopyxis fribergensis, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17502..18200)
DNA (699bp) protein (233aa)
Carboxymethylenebutenolidase n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=Q2GC35_NOVAD rbh
carboxymethylenebutenolidase
Carboxymethylenebutenolidase {ECO:0000313|EMBL:AJA11016.1}; TaxID=1515612 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopy
scnpilot_p_inoc_scaffold_1555_25
Altererythrobacter atlanticus, Altererythrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18338..18592
DNA (255bp) protein (85aa)
Uncharacterized protein n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=Q2GC36_NOVAD
Uncharacterized protein {ECO:0000313|EMBL:AKH43336.1}; TaxID=1267766 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Altererythrobacter.;" source="Alterer
hypothetical protein
scnpilot_p_inoc_scaffold_1555_26
Altererythrobacter atlanticus, Altererythrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18637..19101
DNA (465bp) protein (155aa)
tRNA modification GTPase MnmE {ECO:0000313|EMBL:AKH43337.1}; EC=3.6.-.- {ECO:0000313|EMBL:AKH43337.1};; TaxID=1267766 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrob
tRNA modification GTPase MnmE n=1 Tax=Novosphingobium lindaniclasticum LE124 RepID=T0ILF1_9SPHN
tRNA modification GTPase TrmE
Displaying 26 items

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