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scnpilot_p_inoc_scaffold_1777

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Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_1777_1
Erythrobacter sp. JL475, Erythrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(87..782)
DNA (696bp) protein (232aa)
chemotaxis protein CheY n=1 Tax=Citromicrobium bathyomarinum RepID=UPI0001DD0B1C rbh
Chemotaxis protein CheY {ECO:0000313|EMBL:KEO86590.1}; TaxID=383381 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Erythrobacter.;" source="Erythrobacter
DNA-binding response regulator CtrA
scnpilot_p_inoc_scaffold_1777_2
Altererythrobacter atlanticus, Altererythrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1029..2546)
DNA (1518bp) protein (506aa)
RNA polymerase factor sigma-54 (EC:2.7.7.6)
RNA polymerase sigma-54 factor n=1 Tax=Novosphingobium sp. AP12 RepID=J2GG87_9SPHN rbh
RNA polymerase sigma-54 factor 1 {ECO:0000313|EMBL:AKH43630.1}; TaxID=1267766 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Altererythrobacter.;" source
scnpilot_p_inoc_scaffold_1777_3
Novosphingobium subterraneum, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2581..3441)
DNA (861bp) protein (287aa)
ABC transporter related protein n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=Q2GBM9_NOVAD rbh
ABC transporter-like protein {ECO:0000313|EMBL:KHS46960.1}; TaxID=48936 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphi
ABC transporter-like protein
scnpilot_p_inoc_scaffold_1777_4
Altererythrobacter atlanticus, Altererythrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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3552..3929
DNA (378bp) protein (126aa)
Uncharacterized protein n=1 Tax=Sphingomonas sp. LH128 RepID=J8VR58_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:AKH43632.1}; TaxID=1267766 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Altererythrobacter.;" source="Alterer
hypothetical protein
scnpilot_p_inoc_scaffold_1777_5
Novosphingobium tardaugens, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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4008..5354
DNA (1347bp) protein (449aa)
Uncharacterized protein n=1 Tax=Novosphingobium tardaugens NBRC 16725 RepID=U3A105_9SPHN rbh
Uncharacterized protein {ECO:0000313|EMBL:GAD48443.1}; TaxID=1219035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingo
microcin-processing peptidase 1
scnpilot_p_inoc_scaffold_1777_6
Sphingobium sp. SYK-6, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(5376..6728)
DNA (1353bp) protein (451aa)
MatE family transporter n=1 Tax=Sphingobium sp. SYK-6 RepID=G2IQK4_9SPHN rbh
MatE family transporter
MatE family transporter {ECO:0000313|EMBL:BAK65876.1}; TaxID=627192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp.
scnpilot_p_inoc_scaffold_1777_7
Novosphingobium tardaugens, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(6820..7359)
DNA (540bp) protein (180aa)
Inorganic pyrophosphatase {ECO:0000256|HAMAP-Rule:MF_00209}; EC=3.6.1.1 {ECO:0000256|HAMAP-Rule:MF_00209};; Pyrophosphate phospho-hydrolase {ECO:0000256|HAMAP-Rule:MF_00209}; TaxID=1219035 species="Ba
Inorganic pyrophosphatase n=1 Tax=Novosphingobium tardaugens NBRC 16725 RepID=U2YJR0_9SPHN rbh
inorganic pyrophosphatase
scnpilot_p_inoc_scaffold_1777_8
Altererythrobacter atlanticus, Altererythrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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7636..8745
DNA (1110bp) protein (370aa)
Alkanal monooxygenase alpha chain {ECO:0000313|EMBL:AKH43635.1}; EC=1.14.14.3 {ECO:0000313|EMBL:AKH43635.1};; TaxID=1267766 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Er
Putative uncharacterized protein n=1 Tax=Sphingobium sp. SYK-6 RepID=G2IQG6_9SPHN rbh
hypothetical protein
scnpilot_p_inoc_scaffold_1777_9
Altererythrobacter atlanticus, Altererythrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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8806..10134
DNA (1329bp) protein (443aa)
Histidine--tRNA ligase {ECO:0000313|EMBL:AKH43637.1}; EC=6.1.1.21 {ECO:0000313|EMBL:AKH43637.1};; TaxID=1267766 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobactera
hisS; histidyl-tRNA synthetase (EC:6.1.1.21)
Histidine--tRNA ligase n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=SYH_NOVAD
scnpilot_p_inoc_scaffold_1777_10
Novosphingobium pentaromativorans, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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10559..11629
DNA (1071bp) protein (357aa)
Peptide chain release factor 1 n=1 Tax=Novosphingobium pentaromativorans US6-1 RepID=G6EB12_9SPHN rbh
peptide chain release factor 1 rbh
Peptide chain release factor 1 {ECO:0000256|HAMAP-Rule:MF_00093}; Short=RF-1 {ECO:0000256|HAMAP-Rule:MF_00093};; TaxID=1088721 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales;
scnpilot_p_inoc_scaffold_1777_11
Altererythrobacter atlanticus, Altererythrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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11726..12580
DNA (855bp) protein (285aa)
Release factor glutamine methyltransferase {ECO:0000313|EMBL:AKH43639.1}; EC=2.1.1.- {ECO:0000313|EMBL:AKH43639.1};; TaxID=1267766 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonada
Release factor glutamine methyltransferase n=1 Tax=Novosphingobium sp. AP12 RepID=J2PAB3_9SPHN rbh
HemK family modification methylase
scnpilot_p_inoc_scaffold_1777_12
Altererythrobacter atlanticus, Altererythrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12788..13531
DNA (744bp) protein (248aa)
Uncharacterized protein n=1 Tax=Novosphingobium lindaniclasticum LE124 RepID=T0I282_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:AKH43640.1}; TaxID=1267766 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Altererythrobacter.;" source="Alterer
hypothetical protein
scnpilot_p_inoc_scaffold_1777_13
Novosphingobium tardaugens, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13632..15215
DNA (1584bp) protein (528aa)
Apolipoprotein N-acyltransferase {ECO:0000256|HAMAP-Rule:MF_01148}; Short=ALP N-acyltransferase {ECO:0000256|HAMAP-Rule:MF_01148};; EC=2.3.1.- {ECO:0000256|HAMAP-Rule:MF_01148};; TaxID=1219035 species
Apolipoprotein N-acyltransferase n=1 Tax=Novosphingobium tardaugens NBRC 16725 RepID=U2YJQ6_9SPHN rbh
apolipoprotein N-acyltransferase
scnpilot_p_inoc_scaffold_1777_14
Sphingobium sp. SYK-6, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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15267..16475
DNA (1209bp) protein (403aa)
S-adenosylmethionine synthase {ECO:0000256|HAMAP-Rule:MF_00086, ECO:0000256|RuleBase:RU000541}; Short=AdoMet synthase {ECO:0000256|HAMAP-Rule:MF_00086};; EC=2.5.1.6 {ECO:0000256|HAMAP-Rule:MF_00086, E
S-adenosylmethionine synthetase n=1 Tax=Sphingomonas sp. ATCC 31555 RepID=UPI00030DE3D1 rbh
metK; S-adenosylmethionine synthase rbh
Displaying 14 items

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