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scnpilot_p_inoc_scaffold_860_26

Organism: SCNpilot_P_inoc_Novosphingobium_63_5

near complete RP 50 / 55 MC: 1 BSCG 50 / 51 MC: 1 ASCG 11 / 38
Location: comp(28290..30716)

Top 3 Functional Annotations

Value Algorithm Source
type VI secretion protein n=1 Tax=Citromicrobium sp. JLT1363 RepID=UPI000225E7D4 similarity UNIREF
DB: UNIREF100
  • Identity: 81.4
  • Coverage: 808.0
  • Bit_score: 1329
  • Evalue 0.0
  • rbh
Type IV secretion system protein virB4 {ECO:0000313|EMBL:AKH43937.1}; TaxID=1267766 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Altererythrobacter.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 83.3
  • Coverage: 807.0
  • Bit_score: 1361
  • Evalue 0.0
type IV secretion system protein B4 similarity KEGG
DB: KEGG
  • Identity: 81.5
  • Coverage: 802.0
  • Bit_score: 1312
  • Evalue 0.0

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Taxonomy

Altererythrobacter atlanticus → Altererythrobacter → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 2427
ATGGTGAAATGGATCGGAGCCGCCGCCTGGAGCGCGAAGGAAGCCCTTGCGGGCGAACGCCTGCCCTATGCCCGGCTGGTAGACGAAAACACCGTGCTGCTGCGCGACGGTTCGCTGCTGATGGCACTGCAGGTTCCCGGCCTGTTGTTCGAGACCGAGGATAGCGACGCGCTGAACGCCCATGCGGCCACGCGCGAAGTGATGCTGCGCGCCAATCTGGATGCGCGCTTCGTGATGTATCACCACGTCATCCGCCGCCGGGTGCAGGTGGAACTGGAAGCGACATTCGAAGACCCGCTTTCCGCCCATATCGACCGCCGCTGGCGCGAAAAGCTGAGCCGCGGGGCCCTGTTCATCAACGACCAATTCGTCACGCTGGTGCGCCGTCCGGCGCGCGGCAAGGCGGGCCTCGCCGAACGCATGGCCAAGATGTTGAACCGCAGAGGCCAGGAAGTGCTTGAGGCCGACCCCAAGGATCTGCGCAGCCTGCGCGCAGCGGCAGGCGCCCTGATCGCCTCGCTCGGCCAATATGGGGCCTCTTTGCTGGGCGATTATCAGGGCAATGGCGGCCAGACCAATTCCGAAGTGCTGGAACTGCTCTCGGCCCTCTACAATGGCGAAATGCGCCCCGTGCGCCGTCCGGTTGACGATACCAATATCGGCCTGATGCTGCCCTATCGCCGGGTGAGCTTCGGGCTCGACGCTATGGAATCCAAGGATGGGCGCGGCACCGATTTCGCCTCAATCCTCAGCCTGAAGGATTATCCGGACGCTACTTCGCCCGGCCTGCTCGACCCGCTACTGCGCCTGCCCTTTGAAATGGTGGTGACGGAAAGCTTCGCCCCCAGTGAGCGGCAGACCGCGCGCGAGAAGATGGACCTTGCCCTGCGCCGCCTGCGCTCCGCCGACGAGGAAGCCCGTGCAGAACGTGCGGAAATGCTGGCCGCGCGTGACGAATTGGGGGCTGGATCGGTCGGCTTCGGGGACCACCACCTGACCGTCCTGATCCGCGAGAACAATCTTCCCCGGCTGGACGACGCCTGCGCTTCCTGCGCCGCAGCCTTGGCAGATACCGGCGCCATCGCGGTGCGCGAGGATACCAATCTGGAACCGGCCTTCTGGGCGCAGTTCCCCGGCAATGAAGGCTTTATCGTGCGGCGCGCGATGATCTCTTCCGCCAATATGGCCAGCTTCGCCTCGCTCCATGGCTTCGCGCTGGGGCAGGCCAGCGGCAACCATTGGGGCGAAGCGGTTACGCTGCTGGAAACCACTAGCTCCACGCCCTTCTTCTTCAATTTCCACCATGGCGACCTAGGCAATTTCAGCGTCATCGGGCCCTCGGGCTCGGGCAAGACGGTGGTGATGAACTTCCTTGCCGCGCAGGCGCAGAAGTTCGCACCCCGCACCATCCTGTTCGACAAGGATCGCGGCGCGGAACTGTTCATTCGCGGGATCGGCGGCCGGTATGACCGGATCGCGGCAGGCAGTCCGGCGGGCTTCAACCCGCTGGCCCTGCCCGACAGCGCCGCCAATCGCGCCTTCCTGCGGGACTGGCTGGGCGTGCTGCTGAAGGCCGAAGGGCCGGAGGAACTGGCCACTATCTCCGGCGCGGTCGATGCGGCCTATGCCAACGATCCCTCGTTGCGCCGCCTCCGCCATTTCCGCGAGCTGCTGGCCGGCACCCGTCGCCCGACGCCGGGTGACCTGGCCGACCGGCTGACACCGTGGATCGAAGATGGCGAGCATGGCTGGCTGTTCGACAATGCGGAAGACAGGCTGGACCTTTCCAACCGCGTGCTCGGCTTCGACATGACCGCGCTGCTGGAAAGCCCGCGCCTGCGCACGCCGGTGATGATGTATCTGTTCCACCGCATCGACGAGCGGCTGGACGGCCAGCCGACCATGATCCTGATCGATGAAGGCTGGAAGGCGCTGGATGACGAGGTATTCGCCGCCCGCATTCGCGACTGGCTGAAGACCCTGCGCAAGCGCAACGCGCTGGTGGGCTTTGCCACCCAATCCGCTCGCGACGCGTTGGAAAGCCGCATCTCCACCGCTCTGGTGGAACAGACCGCGACCATGATCTTCATGCCCAATGCCCGCGCCCGGGCGGAGGATTATTGCGACGGATTTGGCCTTACCAGCCACGAACTGGCCCTGATCCGCTCGCTGCCCGCGCATAGCCGCTGCTTCCTGGTACGGCAGCCCGATGCCAGCGTGGTGGTGCGCCTGAACCTGTCCAACGCGCCCGAAGTGCTGACCATTCTTTCCGGCCGGGAAAGCGCCGTGCGCCGCCTCGACACTCTGCGTGAGGCTGTGGGCGACGATCCGGCCAAGTGGTATCCCGCCCTCACCGGCCATGCCTGGCCCAATGCCCAGGGCGATGACGGCGAGGACGATCTCGCCATCTGGGAAGCCGCGGAATGA
PROTEIN sequence
Length: 809
MVKWIGAAAWSAKEALAGERLPYARLVDENTVLLRDGSLLMALQVPGLLFETEDSDALNAHAATREVMLRANLDARFVMYHHVIRRRVQVELEATFEDPLSAHIDRRWREKLSRGALFINDQFVTLVRRPARGKAGLAERMAKMLNRRGQEVLEADPKDLRSLRAAAGALIASLGQYGASLLGDYQGNGGQTNSEVLELLSALYNGEMRPVRRPVDDTNIGLMLPYRRVSFGLDAMESKDGRGTDFASILSLKDYPDATSPGLLDPLLRLPFEMVVTESFAPSERQTAREKMDLALRRLRSADEEARAERAEMLAARDELGAGSVGFGDHHLTVLIRENNLPRLDDACASCAAALADTGAIAVREDTNLEPAFWAQFPGNEGFIVRRAMISSANMASFASLHGFALGQASGNHWGEAVTLLETTSSTPFFFNFHHGDLGNFSVIGPSGSGKTVVMNFLAAQAQKFAPRTILFDKDRGAELFIRGIGGRYDRIAAGSPAGFNPLALPDSAANRAFLRDWLGVLLKAEGPEELATISGAVDAAYANDPSLRRLRHFRELLAGTRRPTPGDLADRLTPWIEDGEHGWLFDNAEDRLDLSNRVLGFDMTALLESPRLRTPVMMYLFHRIDERLDGQPTMILIDEGWKALDDEVFAARIRDWLKTLRKRNALVGFATQSARDALESRISTALVEQTATMIFMPNARARAEDYCDGFGLTSHELALIRSLPAHSRCFLVRQPDASVVVRLNLSNAPEVLTILSGRESAVRRLDTLREAVGDDPAKWYPALTGHAWPNAQGDDGEDDLAIWEAAE*