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scnpilot_p_inoc_scaffold_860_27

Organism: SCNpilot_P_inoc_Novosphingobium_63_5

near complete RP 50 / 55 MC: 1 BSCG 50 / 51 MC: 1 ASCG 11 / 38
Location: comp(30749..31033)

Top 3 Functional Annotations

Value Algorithm Source
Type IV secretion system protein B3, putative n=1 Tax=Erythrobacter sp. SD-21 RepID=A5PB32_9SPHN similarity UNIREF
DB: UNIREF100
  • Identity: 83.0
  • Coverage: 94.0
  • Bit_score: 171
  • Evalue 3.90e-40
Type VI secretion protein {ECO:0000313|EMBL:KHL26081.1}; TaxID=1572751 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Kirrobacter.;" source="Kirrobacter similarity UNIPROT
DB: UniProtKB
  • Identity: 84.6
  • Coverage: 91.0
  • Bit_score: 175
  • Evalue 5.00e-41
type VI secretion protein similarity KEGG
DB: KEGG
  • Identity: 81.3
  • Coverage: 91.0
  • Bit_score: 166
  • Evalue 4.60e-39

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Taxonomy

Kirrobacter mercurialis → Kirrobacter → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 285
GTGAGCGAGCTGATCCGCCACCCCGTCCACCGCGCGCTGACCCGCCCGCAGATGTTCGCCGGGGTGACATATAATTTCTTCATCCTGAACTTCGCGCTGACGACGGAGCTGTTCCTGATCACCGGCAGCTTCTGGGCCCTGCCCGCCGCGCTGGTGTTCCATGTGGTCGGCTATTTCGCCTGTCTGCGCGAACCGCGGATCTTCGACCTCTGGATCACCAAGGTCAGCAAATGCCCGCGCGTGAAGAACTGGAAGCGCTGGGGCTGCAACAGCTACGCCGCCTGA
PROTEIN sequence
Length: 95
VSELIRHPVHRALTRPQMFAGVTYNFFILNFALTTELFLITGSFWALPAALVFHVVGYFACLREPRIFDLWITKVSKCPRVKNWKRWGCNSYAA*