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scnpilot_p_inoc_scaffold_860

Search features with annotation key words

Displaying items 1-30 of 44 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_860_1
Altererythrobacter atlanticus, Altererythrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2..781
DNA (780bp) protein (260aa)
Putative aromatic acid transporter n=1 Tax=Sphingobium sp. SYK-6 RepID=G2ISD4_9SPHN
4-hydroxybenzoate transporter PcaK {ECO:0000313|EMBL:AKH41108.1}; TaxID=1267766 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Altererythrobacter.;" sour
putative aromatic acid transporter
scnpilot_p_inoc_scaffold_860_2
Altererythrobacter atlanticus, Altererythrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

924..1619
DNA (696bp) protein (232aa)
Putative Crp/Fnr family transcriptional regulator n=1 Tax=Novosphingobium tardaugens NBRC 16725 RepID=U2YL57_9SPHN rbh
Nitrogen fixation regulation protein FixK {ECO:0000313|EMBL:AKH42088.1}; TaxID=1267766 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Altererythrobacter.
Crp/FNR family transcriptional regulator
scnpilot_p_inoc_scaffold_860_3
R_Erythrobacter_63_10, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1676..2359)
DNA (684bp) protein (228aa)
membrane protein n=1 Tax=Citromicrobium sp. JLT1363 RepID=UPI000225E2B1
OmpW protein; K07275 outer membrane protein Tax=RIFCSPHIGHO2_12_FULL_Erythrobacter_63_10_curated
OmpW protein
scnpilot_p_inoc_scaffold_860_4
Novosphingobium malaysiense, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2574..4226
DNA (1653bp) protein (551aa)
cb-type cytochrome c oxidase subunit I (EC:1.9.3.1) rbh
Cb-type cytochrome c oxidase subunit I n=1 Tax=Novosphingobium sp. PP1Y RepID=F6IG74_9SPHN rbh
Peptidase S41 {ECO:0000313|EMBL:KHK92265.1}; TaxID=1348853 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium malay
scnpilot_p_inoc_scaffold_860_5
Novosphingobium tardaugens, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4240..4989
DNA (750bp) protein (250aa)
Cytochrome c oxidase cbb3-type subunit II n=1 Tax=Novosphingobium tardaugens NBRC 16725 RepID=U2ZWV1_9SPHN rbh
Cytochrome c oxidase cbb3-type subunit II {ECO:0000313|EMBL:GAD49829.1}; TaxID=1219035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" s
cbb3-type cytochrome c oxidase subunit II
scnpilot_p_inoc_scaffold_860_6
Novosphingobium subterraneum, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4986..5156
DNA (171bp) protein (57aa)
Cbb3-type cytochrome oxidase component n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=Q2G561_NOVAD
Cbb3-type cytochrome oxidase component {ECO:0000313|EMBL:KHS45598.1}; TaxID=48936 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source
Cbb3-type cytochrome oxidase component
scnpilot_p_inoc_scaffold_860_7
Novosphingobium sp. PP1Y, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5149..6090
DNA (942bp) protein (314aa)
cb-type cytochrome c oxidase subunit III (EC:1.9.3.1) rbh
Cbb3-type cytochrome c oxidase subunit n=1 Tax=Novosphingobium sp. PP1Y RepID=F6IG77_9SPHN rbh
Cbb3-type cytochrome c oxidase subunit {ECO:0000256|PIRNR:PIRNR000006}; TaxID=702113 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" sou
scnpilot_p_inoc_scaffold_860_8
Altererythrobacter atlanticus, Altererythrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6077..7549
DNA (1473bp) protein (491aa)
Cytochrome c oxidase cbb3-type accessory protein CcoG n=1 Tax=Novosphingobium tardaugens NBRC 16725 RepID=U2YMX0_9SPHN rbh
Ubp3 associated protein Bre5 {ECO:0000313|EMBL:AKH43784.1}; TaxID=1267766 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Altererythrobacter.;" source="Al
nitrogen fixation protein FixG
scnpilot_p_inoc_scaffold_860_9
Altererythrobacter atlanticus, Altererythrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7555..8016
DNA (462bp) protein (154aa)
Cytochrome c oxidase cbb3-type accessory protein CcoH n=1 Tax=Novosphingobium tardaugens NBRC 16725 RepID=U3A526_9SPHN
FixH {ECO:0000313|EMBL:AKH43783.1}; TaxID=1267766 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Altererythrobacter.;" source="Altererythrobacter atlanti
hypothetical protein
scnpilot_p_inoc_scaffold_860_10
Novosphingobium tardaugens, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8013..10100
DNA (2088bp) protein (696aa)
Putative cation transport ATPase n=1 Tax=Novosphingobium tardaugens NBRC 16725 RepID=U2ZWV5_9SPHN rbh
Putative cation transport ATPase {ECO:0000313|EMBL:GAD49834.1}; TaxID=1219035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="No
heavy metal translocating P-type ATPase
scnpilot_p_inoc_scaffold_860_11
Novosphingobium pentaromativorans, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10110..10256
DNA (147bp) protein (49aa)
Putative uncharacterized protein n=1 Tax=Novosphingobium pentaromativorans US6-1 RepID=G6EBX8_9SPHN
cytochrome oxidase maturation protein Cbb3
Uncharacterized protein {ECO:0000313|EMBL:EHJ61186.1}; TaxID=1088721 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingo
scnpilot_p_inoc_scaffold_860_12
unknown

Not on your lists

10256..10504
DNA (249bp) protein (83aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_860_13
Altererythrobacter atlanticus, Altererythrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10574..11887
DNA (1314bp) protein (438aa)
Oxygen-independent coproporphyrinogen-III oxidase {ECO:0000313|EMBL:AKH42090.1}; EC=1.3.99.22 {ECO:0000313|EMBL:AKH42090.1};; TaxID=1267766 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphi
oxygen-independent coproporphyrinogen III oxidase (EC:1.3.99.22) rbh
Coproporphyrinogen-III oxidase n=1 Tax=Novosphingobium tardaugens NBRC 16725 RepID=U2ZXZ0_9SPHN rbh
scnpilot_p_inoc_scaffold_860_14
Altererythrobacter atlanticus, Altererythrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12069..13526)
DNA (1458bp) protein (486aa)
Lignostilbene-alpha,beta-dioxygenase isozyme I {ECO:0000313|EMBL:AKH42091.1}; EC=1.13.11.43 {ECO:0000313|EMBL:AKH42091.1};; TaxID=1267766 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphing
Putative dioxygenase n=1 Tax=Sphingobium sp. SYK-6 RepID=G2IR63_9SPHN
putative dioxygenase
scnpilot_p_inoc_scaffold_860_15
Altererythrobacter atlanticus, Altererythrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13598..14458)
DNA (861bp) protein (287aa)
Protocatechuate 4,5-dioxygenase beta chain {ECO:0000313|EMBL:AKH42092.1}; EC=1.13.11.8 {ECO:0000313|EMBL:AKH42092.1};; TaxID=1267766 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomona
Protocatechuate 4,5-dioxygenase beta chain n=1 Tax=Sphingobium sp. SYK-6 RepID=G2IR61_9SPHN
protocatechuate 4,5-dioxygenase subunit beta
scnpilot_p_inoc_scaffold_860_16
Altererythrobacter atlanticus, Altererythrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14455..14838)
DNA (384bp) protein (128aa)
Protocatechuate 4,5-dioxygenase alpha chain {ECO:0000313|EMBL:AKH42093.1}; EC=1.13.11.8 {ECO:0000313|EMBL:AKH42093.1};; TaxID=1267766 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomon
Protocatechuate 4,5-dioxygenase alpha chain n=1 Tax=Sphingobium sp. SYK-6 RepID=G2IR62_9SPHN
protocatechuate 4,5-dioxygenase subunit alpha
scnpilot_p_inoc_scaffold_860_17
Novosphingobium pentaromativorans, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15084..17867
DNA (2784bp) protein (928aa)
TonB-dependent receptor n=1 Tax=Novosphingobium pentaromativorans US6-1 RepID=G6EBQ0_9SPHN rbh
TonB-dependent receptor {ECO:0000313|EMBL:EHJ61332.1}; TaxID=1088721 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingo
TonB-dependent receptor
scnpilot_p_inoc_scaffold_860_18
Kirrobacter mercurialis, Kirrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17867..18916
DNA (1050bp) protein (350aa)
UPI0003D6571A related cluster n=1 Tax=unknown RepID=UPI0003D6571A rbh
3-phytase {ECO:0000313|EMBL:KHL24434.1}; TaxID=1572751 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Kirrobacter.;" source="Kirrobacter mercurialis.;"
phy; 3-phytase
scnpilot_p_inoc_scaffold_860_19
Kirrobacter mercurialis, Kirrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18889..20244
DNA (1356bp) protein (452aa)
Uncharacterized protein n=1 Tax=Novosphingobium tardaugens NBRC 16725 RepID=U2ZTV2_9SPHN rbh
Phosphatase {ECO:0000313|EMBL:KHL24432.1}; TaxID=1572751 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Kirrobacter.;" source="Kirrobacter mercurialis.;"
phosphatase
scnpilot_p_inoc_scaffold_860_20
Erythrobacter sp. JL475, Erythrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20267..21814)
DNA (1548bp) protein (516aa)
Exopolyphosphatase n=1 Tax=Erythrobacter litoralis (strain HTCC2594) RepID=Q2NC48_ERYLH rbh
Exopolyphosphatase {ECO:0000313|EMBL:KEO86084.1}; TaxID=383381 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Erythrobacter.;" source="Erythrobacter sp.
exopolyphosphatase
scnpilot_p_inoc_scaffold_860_21
Altererythrobacter atlanticus, Altererythrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21840..23984)
DNA (2145bp) protein (715aa)
Polyphosphate kinase {ECO:0000313|EMBL:AKH43932.1}; EC=2.7.4.1 {ECO:0000313|EMBL:AKH43932.1};; TaxID=1267766 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteracea
Polyphosphate kinase n=1 Tax=Novosphingobium tardaugens NBRC 16725 RepID=U2YH47_9SPHN rbh
polyphosphate kinase
scnpilot_p_inoc_scaffold_860_22
Erythrobacter sp. SD-21, Erythrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24141..25151)
DNA (1011bp) protein (337aa)
Type IV secretion system protein B11, putative n=1 Tax=Erythrobacter sp. SD-21 RepID=A5PB37_9SPHN rbh
Type IV secretion system protein B11, putative {ECO:0000313|EMBL:EDL48785.1}; TaxID=161528 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Erythrobacter.;
type IV secretion system protein B11
scnpilot_p_inoc_scaffold_860_23
Altererythrobacter atlanticus, Altererythrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25161..26285)
DNA (1125bp) protein (375aa)
type VI secretion protein n=1 Tax=Citromicrobium sp. JLT1363 RepID=UPI000225E7D7 rbh
Type IV secretion system protein virB10 {ECO:0000313|EMBL:AKH43934.1}; TaxID=1267766 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Altererythrobacter.;"
type IV secretion system protein B10
scnpilot_p_inoc_scaffold_860_24
Altererythrobacter atlanticus, Altererythrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26285..27100)
DNA (816bp) protein (272aa)
Type IV secretion system protein B9, putative n=1 Tax=Erythrobacter litoralis (strain HTCC2594) RepID=Q2NC52_ERYLH
Type IV secretion system protein virB9 {ECO:0000313|EMBL:AKH43935.1}; Flags: Precursor;; TaxID=1267766 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Alt
type IV secretion system protein B9
scnpilot_p_inoc_scaffold_860_25
Kirrobacter mercurialis, Kirrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27097..28293)
DNA (1197bp) protein (399aa)
Uncharacterized protein n=1 Tax=Erythrobacter sp. SD-21 RepID=A5PB34_9SPHN rbh
Type VI secretion protein {ECO:0000313|EMBL:KHL26787.1}; TaxID=1572751 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Kirrobacter.;" source="Kirrobacter
hypothetical protein
scnpilot_p_inoc_scaffold_860_26
Altererythrobacter atlanticus, Altererythrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28290..30716)
DNA (2427bp) protein (809aa)
type VI secretion protein n=1 Tax=Citromicrobium sp. JLT1363 RepID=UPI000225E7D4 rbh
Type IV secretion system protein virB4 {ECO:0000313|EMBL:AKH43937.1}; TaxID=1267766 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Altererythrobacter.;"
type IV secretion system protein B4
scnpilot_p_inoc_scaffold_860_27
Kirrobacter mercurialis, Kirrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(30749..31033)
DNA (285bp) protein (95aa)
Type IV secretion system protein B3, putative n=1 Tax=Erythrobacter sp. SD-21 RepID=A5PB32_9SPHN
Type VI secretion protein {ECO:0000313|EMBL:KHL26081.1}; TaxID=1572751 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Kirrobacter.;" source="Kirrobacter
type VI secretion protein
scnpilot_p_inoc_scaffold_860_28
Altererythrobacter atlanticus, Altererythrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(31037..31336)
DNA (300bp) protein (100aa)
Uncharacterized protein n=1 Tax=Erythrobacter sp. SD-21 RepID=A5PB31_9SPHN
TrbC/VIRB2 family protein {ECO:0000313|EMBL:AKH43939.1}; Flags: Precursor;; TaxID=1267766 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Altererythrobact
hypothetical protein
scnpilot_p_inoc_scaffold_860_29
Erythrobacter litoralis, Erythrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(31337..32020)
DNA (684bp) protein (228aa)
transglycosylase n=1 Tax=Citromicrobium sp. JLT1363 RepID=UPI000225E574
Transglycosylase {ECO:0000313|EMBL:KEO92819.1}; TaxID=39960 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Erythrobacter.;" source="Erythrobacter litoral
hypothetical protein
scnpilot_p_inoc_scaffold_860_30
Novosphingobium sp. PP1Y, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(32162..32536)
DNA (375bp) protein (125aa)
TPR repeat-containing protein n=1 Tax=Novosphingobium sp. PP1Y RepID=F6IJ28_9SPHN
hypothetical protein
TPR repeat-containing protein {ECO:0000313|EMBL:CCA91654.1}; TaxID=702113 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosp
Displaying items 1-30 of 44 in total

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