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scnpilot_p_inoc_scaffold_1007_23

Organism: SCNpilot_P_inoc_Novosphingobium_63_5

near complete RP 50 / 55 MC: 1 BSCG 50 / 51 MC: 1 ASCG 11 / 38
Location: comp(26358..27029)

Top 3 Functional Annotations

Value Algorithm Source
Rhomboid family protein n=1 Tax=Novosphingobium sp. Rr 2-17 RepID=I9C1E9_9SPHN similarity UNIREF
DB: UNIREF100
  • Identity: 45.0
  • Coverage: 202.0
  • Bit_score: 173
  • Evalue 3.20e-40
Rhomboid family protein {ECO:0000313|EMBL:EIZ77602.1}; TaxID=555793 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingob similarity UNIPROT
DB: UniProtKB
  • Identity: 45.0
  • Coverage: 202.0
  • Bit_score: 173
  • Evalue 4.50e-40
rhomboid family protein similarity KEGG
DB: KEGG
  • Identity: 34.7
  • Coverage: 225.0
  • Bit_score: 111
  • Evalue 4.20e-22

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Taxonomy

Novosphingobium sp. Rr 2-17 → Novosphingobium → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 672
TTGCGCGAAGAGGACGAGACATCCTCTGTGAATGAGACTGAGGGGCAAGGCGCCTTCGCCCTGCCCCTCAGCGCACAATGGCCCGGCTGGGCCCTGATCGCAATCATGGTGGCAGCCTTCGTGCTGCATCTGCCGCGCGGCACCGTCATGTATGAATGGGCCGTCTCCGCCCAGATTCTGCGCGCAGGCTATTGGCAGAACATCCTGCTGCATATGTTCGCCCATGCGGGTTTCATGCATATCGCCTTCAACAGCATGGCGCTGGCCAGCCTGTCGCCCCATGAGGCTTTCCGCCTTGGCGTGGGACCGGGAAGCTGGCTGCGCTACCTCGCTCTGTTCGTCTGCTGCGGGCTTGCCGGGCTGGCGATGTTCCTGGCGATCCATCCCAATGGCGATGTCCCCATGCTGGGCGCCTCGGGAGCGATCTTCGGCTTTGCGGGCTTTCTGGTGCGCTATCCGTCCGGCGCGCCCGGCACCATGCCGTTATGGACACGCGAAACCGGCCGCGCGCTGGTGGATTTCGTGAAGACCAACCTGTTCCTGATCGCGATCCTTACCCTGCCCGCCCTGCTGACCGGCCAGGGCGGCGGCGTGGCGTGGGAGGGGCATCTGGGCGGCTTCCTGTTCGGATTGCTCGCCGCCCCGGCCTTCGTTCCCCGCCACGCGCGCTGA
PROTEIN sequence
Length: 224
LREEDETSSVNETEGQGAFALPLSAQWPGWALIAIMVAAFVLHLPRGTVMYEWAVSAQILRAGYWQNILLHMFAHAGFMHIAFNSMALASLSPHEAFRLGVGPGSWLRYLALFVCCGLAGLAMFLAIHPNGDVPMLGASGAIFGFAGFLVRYPSGAPGTMPLWTRETGRALVDFVKTNLFLIAILTLPALLTGQGGGVAWEGHLGGFLFGLLAAPAFVPRHAR*