ggKbase home page

scnpilot_p_inoc_scaffold_1007_24

Organism: SCNpilot_P_inoc_Novosphingobium_63_5

near complete RP 50 / 55 MC: 1 BSCG 50 / 51 MC: 1 ASCG 11 / 38
Location: comp(27032..28714)

Top 3 Functional Annotations

Value Algorithm Source
2-isopropylmalate synthase {ECO:0000256|HAMAP-Rule:MF_00572, ECO:0000256|SAAS:SAAS00085054}; EC=2.3.3.13 {ECO:0000256|HAMAP-Rule:MF_00572, ECO:0000256|SAAS:SAAS00085054};; Alpha-IPM synthase {ECO:0000 similarity UNIPROT
DB: UniProtKB
  • Identity: 83.3
  • Coverage: 557.0
  • Bit_score: 966
  • Evalue 2.00e-278
2-isopropylmalate synthase (EC:2.3.3.13) similarity KEGG
DB: KEGG
  • Identity: 79.1
  • Coverage: 555.0
  • Bit_score: 924
  • Evalue 1.70e-266
2-isopropylmalate synthase n=1 Tax=Novosphingobium tardaugens NBRC 16725 RepID=U2YN00_9SPHN similarity UNIREF
DB: UNIREF100
  • Identity: 83.3
  • Coverage: 557.0
  • Bit_score: 966
  • Evalue 1.40e-278
  • rbh

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Novosphingobium tardaugens → Novosphingobium → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1683
ATGGCGATGCTCAAAAATCCTGGCGATAAATACCGGCCCTTCCCGCAGGTTCCGATCACGGACCGGCAATGGCCTTCCCGCACGATCACCAAGGCCCCGCGCTGGCTCTCCACCGATCTGCGCGACGGTAATCAGTCGATTATCGATCCGATGGATGCGGTGAAGAAGAACCGCTTCTTCGATACTCTGGTGGAAGTGGGTCTGAAGGAAATCGAAGTCGGTTTCCCCGCTGCTGGCAAGACCGAGTTCGACTTCATCCAGGGCCTCGTCCGCTCGGGCAAAATCCCTCAGGATGTGATGATCCAGGTGCTGACCCAGTCGCGCGAGGATCTGATCCGCACCAGCTTCGACAGTCTGGAAGGCGTCCACGCGGCCATCGTCCACCTCTATAACGCCGTGTCCCCCGCCTGGCGCGACATCGTGTTCCGCATGAGCAAGGCCGAAGTGAAGGAAATCGCCATCAAGGGGGCGAAAATCCTGCGCGACGAGGCTGCCAAGCGCCCTGATACGGACTGGTATTTCGAATATTCGCCCGAGACCTTCTCCACCGCCGAGCTGGATTTCAGCCTGGAGGTTTGCGAGGCGGTGATGGACGTGCTGCAGCCGACAGCGGATCACCAGTTGATCCTGAACCTGCCGGCCACGGTGGAGGCGGCAACGCCCAACGTCTATGCCGACCAGATCGAATATTTCTGCCGTAACATTCCCCGCCGCGAAACGGTGGCGATCAGCCTGCATACCCATAATGACCGGGGCACCGGTGTGGCCGCGGCCGAGTTGGGCCTGATGGCGGGGGCGGACCGCGTGGAAGGCTGCCTGTTCGGCAATGGCGAGCGCACCGGCAATTGCTGCCTGGTGACAGTCGGCCTCAACATGTACACGCAAGGTGTTGATCCAGAACTGGATTTCTCCGACATCGATGCGATCATCGAGACGGTAGAATATTGCAACCAGATCCCGGTCCATCAGCGGCACCCCTATGGCGGCGAGCTGGTGTTCACGGCCTTTTCCGGCAGCCATCAGGATGCGATCAAGAAGGGCTTCGAGGCGCAGTCCAAGCGCAACGATGAACTGTGGCAGGTTCCCTATCTGCCGATCGATCCCGCCGATCTGGGCCGCAATTACGAGGCGGTGATCCGCGTGAACTCGCAAAGCGGCAAGGGCGGTTTCGCCTGGGTGCTGGAGCAGGATCAGGGCCTGAAGCTGCCCAAGAAACTGCAGGCGGACTTTTCCAAGCATGTCCAGCGCATGGCCGACGAGTTGGGCCGCGAGTTGAACGCCGCCGATATCTGGCAAGTTTTCCGCGAAGCCTATTACATCAAGGTCGAAAAGCGCCGCTTCCGGCTGGTCTATTACGATGAAGGCCGCGCGGCGGATGGCACGCGCATCTTCACCGGCACGATTGAAGTGGACGGCAAGGAACAAAGCGTTTCCGGGCGCGGCAAGGGCCTGATCTCTTCCGTGCTGGCCACGCTGAAGGACAGCTTCGGACTGGAGATGGAAGTGCTCGATTATACCGAGCATGCGCTGGGCCAGGGCACTGATGCACAGGCAGCGGCCTATGTCGAATGCGCCCTGCCCGATGGCCGTGTGGTGTGGGGCGTGGGGATCGACGAGGATGTCGCCTCCGCCAGTGTCCGCGCGATCCTTTCCGCCGCAAACGGCGCGACGCGCCAGGCCTGA
PROTEIN sequence
Length: 561
MAMLKNPGDKYRPFPQVPITDRQWPSRTITKAPRWLSTDLRDGNQSIIDPMDAVKKNRFFDTLVEVGLKEIEVGFPAAGKTEFDFIQGLVRSGKIPQDVMIQVLTQSREDLIRTSFDSLEGVHAAIVHLYNAVSPAWRDIVFRMSKAEVKEIAIKGAKILRDEAAKRPDTDWYFEYSPETFSTAELDFSLEVCEAVMDVLQPTADHQLILNLPATVEAATPNVYADQIEYFCRNIPRRETVAISLHTHNDRGTGVAAAELGLMAGADRVEGCLFGNGERTGNCCLVTVGLNMYTQGVDPELDFSDIDAIIETVEYCNQIPVHQRHPYGGELVFTAFSGSHQDAIKKGFEAQSKRNDELWQVPYLPIDPADLGRNYEAVIRVNSQSGKGGFAWVLEQDQGLKLPKKLQADFSKHVQRMADELGRELNAADIWQVFREAYYIKVEKRRFRLVYYDEGRAADGTRIFTGTIEVDGKEQSVSGRGKGLISSVLATLKDSFGLEMEVLDYTEHALGQGTDAQAAAYVECALPDGRVVWGVGIDEDVASASVRAILSAANGATRQA*