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SCNpilot_bf_inoc_scaffold_60_curated

Search features with annotation key words

Displaying items 121-150 of 185 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_bf_inoc_scaffold_60_curated_121
Gottschalkia acidurici, Gottschalkia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

121530..122660
DNA (1131bp) protein (377aa)
Uncharacterized protein n=1 Tax=Clostridium acidurici (strain ATCC 7906 / DSM 604 / KCTC 5404 / 9a) RepID=K0AY97_CLOA9
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFS78219.1}; TaxID=1128398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Gottschalkia.;" source="Clostridium acidurici (strain ATCC 7906 / DSM 604 / KCTC 5404 / 9a).;"
SCNpilot_bf_inoc_scaffold_60_curated_122
unknown

Not on your lists

comp(122724..122927)
DNA (204bp) protein (68aa)

This feature has no annotations

SCNpilot_bf_inoc_scaffold_60_curated_123
Geobacillus stearothermophilus, Geobacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

123342..124535
DNA (1194bp) protein (398aa)
S-adenosylmethionine synthase {ECO:0000256|RuleBase:RU000541}; EC=2.5.1.6 {ECO:0000256|RuleBase:RU000541};; TaxID=1295642 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Geobacillus.;" source="Geobacillus stearothermophilus NUB3621.;"
S-adenosylmethionine synthetase (EC:2.5.1.6)
S-adenosylmethionine synthase n=1 Tax=Geobacillus sp. (strain WCH70) RepID=METK_GEOSW rbh
SCNpilot_bf_inoc_scaffold_60_curated_124
Clostridium ultunense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

124854..127073
DNA (2220bp) protein (740aa)
ATP-dependent RecD-like DNA helicase {ECO:0000256|HAMAP-Rule:MF_01488}; EC=3.6.4.12 {ECO:0000256|HAMAP-Rule:MF_01488};; TaxID=1288971 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium ultunense Esp.;"
recombinase D (EC:3.1.11.5); K03581 exodeoxyribonuclease V alpha subunit [EC:3.1.11.5]
Putative Helicase, , RecD/TraA family n=1 Tax=Clostridium ultunense Esp RepID=M1Z9Z0_9CLOT
SCNpilot_bf_inoc_scaffold_60_curated_125
Caldisalinibacter kiritimatiensis, Caldisalinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

127075..127842
DNA (768bp) protein (256aa)
Phosphoribosyltransferase n=1 Tax=Clostridiaceae bacterium L21-TH-D2 RepID=R1CRR9_9CLOT
phosphoribosyltransferase
Phosphoribosyltransferase {ECO:0000313|EMBL:EOC99398.1}; TaxID=1304284 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Caldisalinibacter.;" source="Caldisalinibacter kiritimatiensis.;"
SCNpilot_bf_inoc_scaffold_60_curated_126
Mahella australiensis, Mahella, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

127852..128268
DNA (417bp) protein (139aa)
Flagellar operon protein YvyF n=1 Tax=Mahella australiensis (strain DSM 15567 / CIP 107919 / 50-1 BON) RepID=F3ZWA9_MAHA5
flagellar operon protein Yvyf
Flagellar operon protein YvyF {ECO:0000313|EMBL:AEE97518.1}; TaxID=697281 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacterales Family IV. Incertae Sedis; Mahella.;" source="Mahella australiensis (strain DSM 15567 / CIP 107919 / 50-1 BON).;"
SCNpilot_bf_inoc_scaffold_60_curated_127
Clostridium aceticum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

128343..128630
DNA (288bp) protein (96aa)
Anti-sigma-28 factor FlgM family protein n=7 Tax=Clostridium thermocellum RepID=A3DHL9_CLOTH
Flagellar biosynthesis anti-sigma factor FlgM {ECO:0000313|EMBL:KJF25807.1}; TaxID=84022 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium aceticum.;"
anti-sigma-28 factor, FlgM; K02398 negative regulator of flagellin synthesis FlgM
SCNpilot_bf_inoc_scaffold_60_curated_128
Caldisalinibacter kiritimatiensis, Caldisalinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

128702..129196
DNA (495bp) protein (165aa)
Uncharacterized protein n=1 Tax=Clostridiaceae bacterium L21-TH-D2 RepID=R1CL07_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EOC99395.1}; TaxID=1304284 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Caldisalinibacter.;" source="Caldisalinibacter kiritimatiensis.;"
hypothetical protein
SCNpilot_bf_inoc_scaffold_60_curated_129
[Clostridium] litorale, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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129212..130864
DNA (1653bp) protein (551aa)
Flagellar hook-associated protein FlgK n=1 Tax=Clostridium papyrosolvens C7 RepID=U4R7A3_9CLOT
Flagellar hook-associated protein 1 {ECO:0000313|EMBL:KDR94756.1}; TaxID=1121324 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="[Clostridium] litorale DSM 5388.;"
flagellar hook-associated protein FlgK; K02396 flagellar hook-associated protein 1 FlgK
SCNpilot_bf_inoc_scaffold_60_curated_130
Gottschalkia acidurici, Gottschalkia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

130875..132473
DNA (1599bp) protein (533aa)
Flagellar hook-associated protein 3 n=1 Tax=Clostridium acidurici (strain ATCC 7906 / DSM 604 / KCTC 5404 / 9a) RepID=K0AU06_CLOA9
flgL; flagellar hook-associated protein 3
Flagellar hook-associated protein 3 {ECO:0000313|EMBL:AFS77323.1}; TaxID=1128398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Gottschalkia.;" source="Clostridium acidurici (strain ATCC 7906 / DSM 604 / KCTC 5404 / 9a).;"
SCNpilot_bf_inoc_scaffold_60_curated_131
BJP_IG2069_Clostridiales_42_11, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

132482..133051
DNA (570bp) protein (190aa)
Uncharacterized protein n=1 Tax=Bacillus macauensis ZFHKF-1 RepID=I8ALX7_9BACI
hypothetical protein
Tax=BJP_IG2069_Clostridiales_42_11
SCNpilot_bf_inoc_scaffold_60_curated_132
Alkaliphilus metalliredigens, Alkaliphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

133061..133507
DNA (447bp) protein (149aa)
Flagellar assembly factor FliW n=1 Tax=Alkaliphilus metalliredigens (strain QYMF) RepID=FLIW_ALKMQ
flagellar assembly protein FliW; K13626 flagellar assembly factor FliW
Flagellar assembly factor FliW {ECO:0000255|HAMAP-Rule:MF_01185}; TaxID=293826 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Alkaliphilus.;" source="Alkaliphilus metalliredigens (strain QYMF).;"
SCNpilot_bf_inoc_scaffold_60_curated_133
Clostridium ultunense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

133510..133737
DNA (228bp) protein (76aa)
Carbon storage regulator homolog n=1 Tax=Clostridium ultunense Esp RepID=M1YVR5_9CLOT
csrA; carbon storage regulator
Carbon storage regulator homolog {ECO:0000256|HAMAP-Rule:MF_00167, ECO:0000256|SAAS:SAAS00093889}; TaxID=1288971 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium ultunense Esp.;"
SCNpilot_bf_inoc_scaffold_60_curated_134
Desulfosporosinus sp. I2, Desulfosporosinus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

133902..135083
DNA (1182bp) protein (394aa)
hypothetical protein n=1 Tax=Anaeromusa acidaminophila RepID=UPI000365352E
Flagellin protein FlaA {ECO:0000313|EMBL:KJR47801.1}; TaxID=1617025 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Desulfosporosinus.;" source="Desulfosporosinus sp. I2.;"
flagellin domain-containing protein; K02406 flagellin
SCNpilot_bf_inoc_scaffold_60_curated_135
Clostridium sp. IBUN13A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

135179..137233
DNA (2055bp) protein (685aa)
glycosyltransferase (EC:2.4.-.-)
Putative glycosyltransferase n=1 Tax=Clostridium ljungdahlii (strain ATCC 55383 / DSM 13528 / PETC) RepID=D8GQB8_CLOLD
Flagellar hook-associated protein FlgL {ECO:0000313|EMBL:KJZ97645.1}; TaxID=1523156 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN13A.;"
SCNpilot_bf_inoc_scaffold_60_curated_136
Desulfosporosinus sp. I2, Desulfosporosinus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

137223..138221
DNA (999bp) protein (333aa)
NAD-dependent epimerase/dehydratase n=1 Tax=Psychrobacter cryohalolentis (strain K5) RepID=Q1QD53_PSYCK
UDP-glucose 4-epimerase {ECO:0000313|EMBL:KJR47798.1}; TaxID=1617025 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Desulfosporosinus.;" source="Desulfosporosinus sp. I2.;"
NAD-dependent epimerase/dehydratase
SCNpilot_bf_inoc_scaffold_60_curated_137
Desulfosporosinus sp. I2, Desulfosporosinus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

138239..139372
DNA (1134bp) protein (378aa)
glutamine--scyllo-inositol transaminase (EC:2.6.1.50)
hypothetical protein n=1 Tax=Cloacimonetes bacterium SCGC AAA255-B16 RepID=UPI00036DBBEA
UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase {ECO:0000313|EMBL:KJR47797.1}; TaxID=1617025 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Desulfosporosinus.;" source="Desulfosporosinus sp. I2.;"
SCNpilot_bf_inoc_scaffold_60_curated_138
CG_Elusi_03, Elusimicrobia, Bacteria

Not on your lists

139362..139907
DNA (546bp) protein (182aa)
Bacterial transferase family (Hexapeptide motif) n=1 Tax=Coxiella burnetii (strain CbuG_Q212) RepID=B6J0M5_COXB2
transferase family protein
Tax=CG_Elusi_03
SCNpilot_bf_inoc_scaffold_60_curated_139
R_Fluviicola_43_260, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

139943..140563
DNA (621bp) protein (207aa)
hisH; imidazole glycerol phosphate synthase subunit HisH (EC:2.4.2.-); K02501 glutamine amidotransferase [EC:2.4.2.-]
Imidazole glycerol phosphate synthase subunit HisH 2 n=1 Tax=Methanococcus maripaludis (strain S2 / LL) RepID=HIS52_METMP
Tax=RIFCSPHIGHO2_02_FULL_Fluviicola_43_260_curated
SCNpilot_bf_inoc_scaffold_60_curated_140
Clostridium sp. Maddingley MBC34-26, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

140557..141309
DNA (753bp) protein (251aa)
histidine biosynthesis protein; K02500 cyclase [EC:4.1.3.-]
Glycosyl amidation-associated protein WbuZ n=1 Tax=Clostridium sp. Maddingley MBC34-26 RepID=K6TIG1_9CLOT
Glycosyl amidation-associated protein WbuZ {ECO:0000313|EMBL:EKQ51110.1}; TaxID=1196322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. Maddingley MBC34-26.;"
SCNpilot_bf_inoc_scaffold_60_curated_141
Janthinobacterium sp. Marseille, Janthinobacterium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

141318..142448
DNA (1131bp) protein (377aa)
LPS biosynthesis protein WbpG n=1 Tax=Methylotenera mobilis RepID=UPI0003626929
wbpG; LPS biosynthesis protein WbpG
LPS biosynthesis protein WbpG {ECO:0000313|EMBL:ABR91442.1}; TaxID=375286 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Janthinobacterium.;" source="Janthinobacterium sp. (strain Marseille) (Minibacterium massiliensis).;"
SCNpilot_bf_inoc_scaffold_60_curated_142
Desulfitobacterium dichloroeliminans, Desulfitobacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(142506..144191)
DNA (1686bp) protein (562aa)
Flagellin/flagellar hook associated protein n=1 Tax=Desulfitobacterium dichloroeliminans (strain LMG P-21439 / DCA1) RepID=L0FBH4_DESDL
flagellin/flagellar hook associated protein
Flagellin/flagellar hook associated protein {ECO:0000313|EMBL:AGA70298.1}; TaxID=871963 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Desulfitobacterium.;" source="Desulfitobacterium dichloroeliminans (strain LMG P-21439 / DCA1).;"
SCNpilot_bf_inoc_scaffold_60_curated_143
Clostridium saccharoperbutylacetonicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(144296..145831)
DNA (1536bp) protein (512aa)
Uncharacterized protein n=1 Tax=Clostridium saccharoperbutylacetonicum N1-4(HMT) RepID=M1LS40_9CLOT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGF55740.1}; TaxID=931276 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium saccharoperbutylacetonicum N1-4(HMT).;"
SCNpilot_bf_inoc_scaffold_60_curated_144
Syntrophomonas wolfei, Syntrophomonas, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

145919..147157
DNA (1239bp) protein (413aa)
Pyridoxal phosphate-dependent enzyme n=1 Tax=Syntrophomonas wolfei subsp. wolfei (strain DSM 2245B / Goettingen) RepID=Q0AZ27_SYNWW
pyridoxal phosphate-dependent enzyme
Pyridoxal phosphate-dependent enzyme {ECO:0000313|EMBL:ABI68027.1}; TaxID=335541 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Syntrophomonadaceae; Syntrophomonas.;" source="Syntrophomonas wolfei subsp. wolfei (strain DSM 2245B / Goettingen).;"
SCNpilot_bf_inoc_scaffold_60_curated_145
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

147212..147799
DNA (588bp) protein (196aa)
hexapeptide transferase n=1 Tax=Clostridium botulinum RepID=UPI0002E43037
Lipopolysaccharides biosynthesis acetyltransferase {ECO:0000313|EMBL:AIY80857.1}; TaxID=1415774 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum 202F.;"
hexapeptide transferase family protein
SCNpilot_bf_inoc_scaffold_60_curated_146
Eubacterium limosum, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

147796..149118
DNA (1323bp) protein (441aa)
Uncharacterized protein n=1 Tax=Eubacterium limosum (strain KIST612) RepID=E3GE49_EUBLK
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADO37544.1}; TaxID=903814 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium limosum (strain KIST612).;"
SCNpilot_bf_inoc_scaffold_60_curated_147
Clostridium sporogenes, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

149136..150152
DNA (1017bp) protein (339aa)
Oxidoreductase, NAD-binding domain protein n=1 Tax=Clostridium sporogenes ATCC 15579 RepID=J7SFA1_CLOSG
Oxidoreductase, NAD-binding domain protein {ECO:0000313|EMBL:EDU35676.1}; TaxID=471871 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sporogenes ATCC 15579.;"
lipopolysaccharide biosynthesis protein
SCNpilot_bf_inoc_scaffold_60_curated_148
Chitinivibrio alkaliphilus, Chitinivibrio, Chitinivibrionales, Chitinivibrionia, Fibrobacteres, Bacteria

Not on your lists

150308..150709
DNA (402bp) protein (134aa)
Flagellar protein FlaG protein n=1 Tax=candidate division TG3 bacterium ACht1 RepID=U7D8I1_9BACT
Flagellar protein FlaG protein {ECO:0000313|EMBL:ERP31856.1}; TaxID=1313304 species="Bacteria; Fibrobacteres; Chitinivibrionia; Chitinivibrionales; Chitinivibrionaceae; Chitinivibrio.;" source="Chitinivibrio alkaliphilus ACht1.;"
flagellar protein flag protein; K06603 flagellar protein FlaG
SCNpilot_bf_inoc_scaffold_60_curated_149
Chitinivibrio alkaliphilus, Chitinivibrio, Chitinivibrionales, Chitinivibrionia, Fibrobacteres, Bacteria

Not on your lists

150732..152624
DNA (1893bp) protein (631aa)
Flagellar hook-associated protein FliD n=1 Tax=candidate division TG3 bacterium ACht1 RepID=U7DBS5_9BACT
Flagellar hook-associated protein FliD {ECO:0000313|EMBL:ERP31855.1}; TaxID=1313304 species="Bacteria; Fibrobacteres; Chitinivibrionia; Chitinivibrionales; Chitinivibrionaceae; Chitinivibrio.;" source="Chitinivibrio alkaliphilus ACht1.;"
flagellar capping protein; K02407 flagellar hook-associated protein 2
SCNpilot_bf_inoc_scaffold_60_curated_150
unknown

Not on your lists

152624..152989
DNA (366bp) protein (122aa)

This feature has no annotations

Displaying items 121-150 of 185 in total

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