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SCNpilot_bf_inoc_scaffold_11_curated

Search features with annotation key words

Displaying items 61-90 of 321 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_bf_inoc_scaffold_11_curated_61
[Clostridium] celerecrescens, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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65127..66008
DNA (882bp) protein (294aa)
Binding-protein-dependent transport systems inner membrane component n=1 Tax=Clostridium phytofermentans (strain ATCC 700394 / DSM 18823 / ISDg) RepID=A9KSL7_CLOPH
ABC transporter {ECO:0000313|EMBL:KEZ90603.1}; TaxID=29354 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] celerecrescens.;"
binding-protein-dependent transport systems inner membrane component; K02026 multiple sugar transport system permease protein
SCNpilot_bf_inoc_scaffold_11_curated_62
GWF2_Planctomycetes_41_51_curated, Phycisphaerae, Planctomycetes, Bacteria

Not on your lists

66015..68294
DNA (2280bp) protein (760aa)
Kojibiose phosphorylase (EC:2.4.1.230); K10231 kojibiose phosphorylase [EC:2.4.1.230]
Kojibiose phosphorylase id=4512062 bin=GWF2_Planctomycete_41_51 species=Paenibacillus curdlanolyticus genus=Paenibacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=GWF2_Planctomycete_41_51 organism_group=Planctomycetes organism_desc=a211
Tax=GWF2_Planctomycetes_41_51_curated
SCNpilot_bf_inoc_scaffold_11_curated_63
Lachnoclostridium phytofermentans, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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68297..70489
DNA (2193bp) protein (731aa)
Kojibiose phosphorylase (EC:2.4.1.230)
Nigerose phosphorylase; EC=2.4.1.279 {ECO:0000269|PubMed:21808968};; TaxID=357809 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Clostridium phytofermentans (strain ATCC 700394 / DSM 18823 / ISDg); (Lachnoclostridium phytofermentans).;"
Nigerose phosphorylase n=1 Tax=Clostridium phytofermentans (strain ATCC 700394 / DSM 18823 / ISDg) RepID=NIGP_CLOPH rbh
SCNpilot_bf_inoc_scaffold_11_curated_64
Marvinbryantia formatexigens, Marvinbryantia, Clostridiales, Clostridia, Firmicutes, Bacteria

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70486..71163
DNA (678bp) protein (226aa)
Beta-phosphoglucomutase {ECO:0000313|EMBL:EET59938.1}; EC=5.4.2.6 {ECO:0000313|EMBL:EET59938.1};; TaxID=478749 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Marvinbryantia.;" source="Marvinbryantia formatexigens DSM 14469.;"
beta-phosphoglucomutase; K01838 beta-phosphoglucomutase [EC:5.4.2.6]
Beta-phosphoglucomutase n=1 Tax=Marvinbryantia formatexigens DSM 14469 RepID=C6LHF1_9FIRM
SCNpilot_bf_inoc_scaffold_11_curated_65
Lachnoclostridium phytofermentans, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

71186..72727
DNA (1542bp) protein (514aa)
Putative uncharacterized protein n=1 Tax=Clostridium phytofermentans (strain ATCC 700394 / DSM 18823 / ISDg) RepID=A9KSL2_CLOPH
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABX43664.1}; TaxID=357809 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Clostridium phytofermentans (strain ATCC 700394 / DSM 18823 / ISDg); (Lachnoclostridium phytofermentans).;"
SCNpilot_bf_inoc_scaffold_11_curated_66
Lachnoclostridium phytofermentans, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

72745..73368
DNA (624bp) protein (208aa)
Coagulation factor 5/8 type domain protein n=1 Tax=Clostridium phytofermentans (strain ATCC 700394 / DSM 18823 / ISDg) RepID=A9KSL1_CLOPH
coagulation factor 5/8 type domain-containing protein
Coagulation factor 5/8 type domain protein {ECO:0000313|EMBL:ABX43663.1}; TaxID=357809 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Clostridium phytofermentans (strain ATCC 700394 / DSM 18823 / ISDg); (Lachnoclostridium phytofermentans).;"
SCNpilot_bf_inoc_scaffold_11_curated_67
RBG_19FT_COMBO_Chloroflexi_50_10_curated, Chloroflexi, Bacteria

Not on your lists

comp(73447..75117)
DNA (1671bp) protein (557aa)
ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease/ATP-binding protein CydC n=1 Tax=Caldithrix abyssi DSM 13497 RepID=H1XPL3_9BACT
cydC; cysteine ABC transporter permease/ATP-binding protein CydC; K16012 ATP-binding cassette, subfamily C, bacterial CydC
Tax=RBG_19FT_COMBO_Chloroflexi_50_10_curated
SCNpilot_bf_inoc_scaffold_11_curated_68
Clostridium saccharoperbutylacetonicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(75110..76753)
DNA (1644bp) protein (548aa)
ATP-binding/permease protein CydC n=1 Tax=Clostridium saccharoperbutylacetonicum N1-4(HMT) RepID=M1LWM7_9CLOT
cydC2; ATP-binding/permease protein CydC
ATP-binding/permease protein CydC {ECO:0000313|EMBL:AGF57605.1}; TaxID=931276 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium saccharoperbutylacetonicum N1-4(HMT).;"
SCNpilot_bf_inoc_scaffold_11_curated_69
Desulfosporosinus youngiae, Desulfosporosinus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(76771..77775)
DNA (1005bp) protein (335aa)
cytochrome d oxidase cyd subunit II (EC:1.10.3.10)
Cytochrome d oxidase cyd, subunit II n=1 Tax=Desulfosporosinus youngiae DSM 17734 RepID=H5XUQ1_9FIRM
Cytochrome d oxidase cyd, subunit II {ECO:0000313|EMBL:EHQ89208.1}; TaxID=768710 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Desulfosporosinus.;" source="Desulfosporosinus youngiae DSM 17734.;"
SCNpilot_bf_inoc_scaffold_11_curated_70
Desulfitobacterium dehalogenans, Desulfitobacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(77769..79160)
DNA (1392bp) protein (464aa)
cytochrome bd-type quinol oxidase subunit 1 (EC:1.10.3.10)
Cytochrome bd-type quinol oxidase, subunit 1 {ECO:0000313|EMBL:AFL99672.1}; EC=1.10.3.10 {ECO:0000313|EMBL:AFL99672.1};; TaxID=756499 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Desulfitobacterium.;" source="Desulfitobacterium dehalogenans (strain ATCC 51507 / DSM 9161 /; JW/IU-DC1).;"
Cytochrome bd-type quinol oxidase, subunit 1 n=1 Tax=Desulfitobacterium dehalogenans (strain ATCC 51507 / DSM 9161 / JW/IU-DC1) RepID=I4A6T8_DESDJ
SCNpilot_bf_inoc_scaffold_11_curated_71
Oceanobacillus picturae, Oceanobacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

79354..80319
DNA (966bp) protein (322aa)
hypothetical protein n=1 Tax=Bacillus massiliosenegalensis RepID=UPI0002E265D6
Inner membrane protein YrbG {ECO:0000313|EMBL:CDO03913.1}; TaxID=171693 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Oceanobacillus.;" source="Oceanobacillus picturae.;"
CaCA family Na+/Ca+ antiporter; K07301 inner membrane protein
SCNpilot_bf_inoc_scaffold_11_curated_72
Caloramator australicus, Caloramator, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

80341..82254
DNA (1914bp) protein (638aa)
Membrane protein, Bmp family n=1 Tax=Caloramator australicus RC3 RepID=I7LG93_9CLOT
Membrane protein, Bmp family {ECO:0000313|EMBL:CCJ33105.1}; TaxID=857293 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Caloramator.;" source="Caloramator australicus RC3.;"
putative ABC-type transport system, periplasmic component/surface lipoprotein
SCNpilot_bf_inoc_scaffold_11_curated_73
Caloramator australicus, Caloramator, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(82350..82931)
DNA (582bp) protein (194aa)
Uncharacterized protein n=1 Tax=Caloramator australicus RC3 RepID=I7K6B5_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCJ33104.1}; TaxID=857293 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Caloramator.;" source="Caloramator australicus RC3.;"
hypothetical protein
SCNpilot_bf_inoc_scaffold_11_curated_74
Eubacterium sp. CAG:86, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(83155..84771)
DNA (1617bp) protein (539aa)
Uncharacterized protein n=1 Tax=Paenibacillus sp. (strain JDR-2) RepID=C6D6W8_PAESJ
Uncharacterized protein {ECO:0000313|EMBL:CCX82453.1}; TaxID=1262895 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:86.;"
hypothetical protein
SCNpilot_bf_inoc_scaffold_11_curated_75
Catenibacterium sp. CAG:290, Catenibacterium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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84865..85782
DNA (918bp) protein (306aa)
Oxidoreductase aldo/keto reductase family protein n=1 Tax=Catenibacterium sp. CAG:290 RepID=R7GPC2_9FIRM
Oxidoreductase aldo/keto reductase family protein {ECO:0000313|EMBL:CDE28618.1}; TaxID=1262767 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Catenibacterium; environmental samples.;" source="Catenibacterium sp. CAG:290.;"
Aldo/keto reductase family enzyme
SCNpilot_bf_inoc_scaffold_11_curated_76
GWC2_Clostridiales_40_7_curated, Clostridiales, Bacteria

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comp(85789..86982)
DNA (1194bp) protein (398aa)
hypothetical protein
Putative uncharacterized protein id=4136230 bin=GWC2_Clostridiales_40_7 species=Clostridium cellulovorans genus=Clostridium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWC2_Clostridiales_40_7 organism_group=Firmicute
Tax=GWC2_Clostridiales_40_7_curated
SCNpilot_bf_inoc_scaffold_11_curated_77
Clostridium intestinale, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


87675..89660
DNA (1986bp) protein (662aa)
Methionine--tRNA ligase (EC:6.1.1.10); K01874 methionyl-tRNA synthetase [EC:6.1.1.10]
Methionyl-tRNA synthetase n=1 Tax=Clostridium intestinale URNW RepID=U2NPE9_9CLOT
Methionyl-tRNA synthetase {ECO:0000313|EMBL:ERK31028.1}; TaxID=1294142 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium intestinale URNW.;"
SCNpilot_bf_inoc_scaffold_11_curated_78
Thermosediminibacter oceani, Thermosediminibacter, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

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comp(89794..91089)
DNA (1296bp) protein (432aa)
6-phospho-beta-glucosidase; K01222 6-phospho-beta-glucosidase [EC:3.2.1.86]
6-phospho-beta-glucosidase n=1 Tax=Thermosediminibacter oceani (strain ATCC BAA-1034 / DSM 16646 / JW/IW-1228P) RepID=D9S0W2_THEOJ
6-phospho-beta-glucosidase {ECO:0000313|EMBL:ADL07126.1}; TaxID=555079 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacterales Family III. Incertae Sedis; Thermosediminibacter.;" source="Thermosediminibacter oceani (strain ATCC BAA-1034 / DSM 16646 /; JW/IW-1228P).;"
SCNpilot_bf_inoc_scaffold_11_curated_79
Leptotrichia goodfellowii, Leptotrichia, Fusobacteriales, Fusobacteriia, Fusobacteria, Bacteria

Not on your lists

91230..91991
DNA (762bp) protein (254aa)
Transcriptional regulator, DeoR family n=1 Tax=Leptotrichia goodfellowii F0264 RepID=D0GPY4_9FUSO
Transcriptional regulator, DeoR family {ECO:0000313|EMBL:EEY33850.1}; TaxID=596323 species="Bacteria; Fusobacteria; Fusobacteriales; Leptotrichiaceae; Leptotrichia.;" source="Leptotrichia goodfellowii F0264.;"
DeoR family transcriptional regulator; K02444 DeoR family transcriptional regulator, glycerol-3-phosphate regulon repressor
SCNpilot_bf_inoc_scaffold_11_curated_80
[Clostridium] sticklandii, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

92053..93678
DNA (1626bp) protein (542aa)
Putative uncharacterized protein n=1 Tax=Clostridium sticklandii (strain ATCC 12662 / DSM 519 / JCM 1433 / NCIB 10654) RepID=E3PTG8_CLOSD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBH22172.1}; TaxID=499177 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Clostridium sticklandii (strain ATCC 12662 / DSM 519 / JCM 1433 / NCIB; 10654).;"
SCNpilot_bf_inoc_scaffold_11_curated_81
Alkaliphilus oremlandii, Alkaliphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

93741..94973
DNA (1233bp) protein (411aa)
peptidase M29 aminopeptidase II; K01269 aminopeptidase [EC:3.4.11.-]
Peptidase M29 aminopeptidase II n=1 Tax=Alkaliphilus oremlandii (strain OhILAs) RepID=A8MM56_ALKOO
Peptidase M29 aminopeptidase II {ECO:0000313|EMBL:ABW18223.1}; TaxID=350688 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Alkaliphilus.;" source="Alkaliphilus oremlandii (strain OhILAs) (Clostridium oremlandii; (strain OhILAs)).;"
SCNpilot_bf_inoc_scaffold_11_curated_82
Clostridiales bacterium oral taxon 876, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

95132..97444
DNA (2313bp) protein (771aa)
hypothetical protein n=1 Tax=Anaeromusa acidaminophila RepID=UPI00037B23EE
Diguanylate cyclase domain protein {ECO:0000313|EMBL:ERI93289.1}; TaxID=1321778 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="Clostridiales bacterium oral taxon 876 str. F0540.;"
diguanylate cyclase
SCNpilot_bf_inoc_scaffold_11_curated_83
Clostridium bartlettii CAG:1329, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

97527..98000
DNA (474bp) protein (158aa)
Glutathione peroxidase n=1 Tax=Clostridium bartlettii CAG:1329 RepID=R5X897_9CLOT
Glutathione peroxidase {ECO:0000256|RuleBase:RU000499}; TaxID=1263063 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium bartlettii CAG:1329.;"
gpo; glutathione peroxidase
SCNpilot_bf_inoc_scaffold_11_curated_84
Clostridium autoethanogenum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

98082..98597
DNA (516bp) protein (172aa)
PrcB C-terminal domain containing protein n=1 Tax=Clostridium autoethanogenum DSM 10061 RepID=U5RR48_9CLOT
PrcB C-terminal domain containing protein
PrcB C-terminal domain containing protein {ECO:0000313|EMBL:AGY75210.1}; Flags: Precursor;; TaxID=1341692 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium autoethanogenum DSM 10061.;"
SCNpilot_bf_inoc_scaffold_11_curated_85
Bacillus alcalophilus, Bacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

98803..99738
DNA (936bp) protein (312aa)
ATPase; K03924 MoxR-like ATPase [EC:3.6.3.-]
ATPase n=1 Tax=Bacillus alcalophilus ATCC 27647 RepID=J8QAF8_BACAO
Magnesium chelatase {ECO:0000313|EMBL:KGA96759.1}; TaxID=1218173 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus.;" source="Bacillus alcalophilus ATCC 27647.;"
SCNpilot_bf_inoc_scaffold_11_curated_86
Amphibacillus xylanus, Amphibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

99750..100940
DNA (1191bp) protein (397aa)
Uncharacterized protein n=1 Tax=Amphibacillus xylanus (strain ATCC 51415 / DSM 6626 / JCM 7361 / LMG 17667 / NBRC 15112 / Ep01) RepID=K0J3Q6_AMPXN
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAM47792.1}; TaxID=698758 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Amphibacillus.;" source="Amphibacillus xylanus (strain ATCC 51415 / DSM 6626 / JCM 7361 / LMG; 17667 / NBRC 15112 / Ep01).;"
SCNpilot_bf_inoc_scaffold_11_curated_87
unknown

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100924..102192
DNA (1269bp) protein (423aa)

This feature has no annotations

SCNpilot_bf_inoc_scaffold_11_curated_88
[Clostridium] stercorarium, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

102486..103631
DNA (1146bp) protein (382aa)
oadB; oxaloacetate decarboxylase beta chain (EC:4.1.1.3)
Oxaloacetate decarboxylase beta chain {ECO:0000313|EMBL:AGC68203.1}; EC=4.1.1.3 {ECO:0000313|EMBL:AGC68203.1};; TaxID=1121335 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="Clostridium stercorarium subsp. stercorarium (strain ATCC 35414 / DSM; 8532 / NCIMB 11754).;"
OadB n=1 Tax=Clostridium stercorarium subsp. stercorarium (strain ATCC 35414 / DSM 8532 / NCIMB 11754) RepID=L7VRM1_CLOSH
SCNpilot_bf_inoc_scaffold_11_curated_89
unknown

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103641..103772
DNA (132bp) protein (44aa)

This feature has no annotations

SCNpilot_bf_inoc_scaffold_11_curated_90
[Clostridium] sticklandii, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

103994..105052
DNA (1059bp) protein (353aa)
carA; carbamoyl phosphate synthetase small subunit (EC:6.3.5.5); K01956 carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]
Carbamoyl-phosphate synthase small chain {ECO:0000256|HAMAP-Rule:MF_01209}; EC=6.3.5.5 {ECO:0000256|HAMAP-Rule:MF_01209, ECO:0000313|EMBL:CBH22544.1};; Carbamoyl-phosphate synthetase glutamine chain {ECO:0000256|HAMAP-Rule:MF_01209}; TaxID=499177 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Clostridium sticklandii (strain ATCC 12662 / DSM 519 / JCM 1433 / NCIB; 10654).;"
Carbamoyl-phosphate synthase small chain n=1 Tax=Clostridium sticklandii (strain ATCC 12662 / DSM 519 / JCM 1433 / NCIB 10654) RepID=E3PV91_CLOSD
Displaying items 61-90 of 321 in total

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