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SCNpilot_bf_inoc_scaffold_11_curated

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Displaying items 151-180 of 321 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_bf_inoc_scaffold_11_curated_151
Clostridium novyi, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(174104..174457)
DNA (354bp) protein (118aa)
LrgA n=1 Tax=Treponema primitia RepID=UPI0002555198
Murein hydrolase transporter LrgA {ECO:0000313|EMBL:KGM96499.1}; TaxID=1444289 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium novyi A str. 4552.;"
Putative effector of murein hydrolase LrgA
SCNpilot_bf_inoc_scaffold_11_curated_152
BJP_IG2102_Clostridiales_34_350, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(174669..176546)
DNA (1878bp) protein (626aa)
Hsp90 protein n=1 Tax=Roseburia sp. CAG:303 RepID=R7IPP2_9FIRM
heat shock protein Hsp90; K04079 molecular chaperone HtpG
Tax=BJP_IG2102_Clostridiales_34_350
SCNpilot_bf_inoc_scaffold_11_curated_153
[Clostridium] sticklandii, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

176728..177390
DNA (663bp) protein (221aa)
Putative CBS:Amino acid-binding ACT n=1 Tax=Clostridium sticklandii (strain ATCC 12662 / DSM 519 / JCM 1433 / NCIB 10654) RepID=E3PTI4_CLOSD
cbs:amino acid-binding act
Putative CBS:Amino acid-binding ACT {ECO:0000313|EMBL:CBH22188.1}; TaxID=499177 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Clostridium sticklandii (strain ATCC 12662 / DSM 519 / JCM 1433 / NCIB; 10654).;"
SCNpilot_bf_inoc_scaffold_11_curated_154
GWB2_Clostridiales_37_7_curated, Clostridiales, Bacteria

Not on your lists

177680..178825
DNA (1146bp) protein (382aa)
GGDEF domain-containing protein id=2141659 bin=GWB2_Clostridiales_37_7 species=Arcobacter sp. L genus=Arcobacter taxon_order=Campylobacterales taxon_class=Epsilonproteobacteria phylum=Proteobacteria tax=GWB2_Clostridiales_37_7 organism_group=Firmicute organism_desc=Good +
diguanylate cyclase and metal dependent phosphohydrolase
Tax=GWB2_Clostridiales_37_7_curated
SCNpilot_bf_inoc_scaffold_11_curated_155
Gottschalkia acidurici, Gottschalkia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(178944..179639)
DNA (696bp) protein (232aa)
Integral membrane protein DUF1461 n=1 Tax=Clostridium acidurici (strain ATCC 7906 / DSM 604 / KCTC 5404 / 9a) RepID=K0AWR4_CLOA9
hypothetical protein
Integral membrane protein DUF1461 {ECO:0000313|EMBL:AFS78263.1}; TaxID=1128398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Gottschalkia.;" source="Clostridium acidurici (strain ATCC 7906 / DSM 604 / KCTC 5404 / 9a).;"
SCNpilot_bf_inoc_scaffold_11_curated_156
Alkaliphilus oremlandii, Alkaliphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

179767..183060
DNA (3294bp) protein (1098aa)
ATP-dependent helicase/deoxyribonuclease subunit B {ECO:0000255|HAMAP-Rule:MF_01452}; EC=3.1.-.- {ECO:0000255|HAMAP-Rule:MF_01452};; EC=3.6.4.12 {ECO:0000255|HAMAP-Rule:MF_01452};; ATP-dependent helicase/nuclease AddB {ECO:0000255|HAMAP-Rule:MF_01452}; TaxID=350688 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Alkaliphilus.;" source="Alkaliphilus oremlandii (strain OhILAs) (Clostridium oremlandii; (strain OhILAs)).;"
ATP-dependent helicase/deoxyribonuclease subunit B n=1 Tax=Alkaliphilus oremlandii (strain OhILAs) RepID=ADDB_ALKOO rbh
ATP-dependent nuclease subunit AddB
SCNpilot_bf_inoc_scaffold_11_curated_157
Caloranaerobacter azorensis, Caloranaerobacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

183064..186693
DNA (3630bp) protein (1210aa)
ATP-dependent helicase/nuclease subunit A {ECO:0000256|HAMAP-Rule:MF_01451, ECO:0000256|SAAS:SAAS00044589}; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_01451, ECO:0000256|SAAS:SAAS00274943};; EC=3.6.4.12 {ECO:0000256|HAMAP-Rule:MF_01451, ECO:0000256|SAAS:SAAS00145970};; ATP-dependent helicase/nuclease AddA {ECO:0000256|HAMAP-Rule:MF_01451}; TaxID=1156417 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Caloranaerobacter.;" source="Caloranaerobacter azorensis H53214.;"
addA; ATP-dependent helicase/deoxyribonuclease, subunit A (EC:3.6.1.-)
ATP-dependent helicase/nuclease subunit A n=1 Tax=Clostridium acidurici (strain ATCC 7906 / DSM 604 / KCTC 5404 / 9a) RepID=K0B070_CLOA9
SCNpilot_bf_inoc_scaffold_11_curated_158
Clostridium carboxidivorans, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

186707..187504
DNA (798bp) protein (266aa)
3-2-5-bisphosphate nucleotidase (EC:3.1.3.7)
Inositol monophosphatase n=1 Tax=Clostridium carboxidivorans P7 RepID=C6PP05_9CLOT
Inositol monophosphatase {ECO:0000313|EMBL:EET89083.1}; TaxID=536227 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium carboxidivorans P7.;"
SCNpilot_bf_inoc_scaffold_11_curated_159
Leptotrichia sp. oral taxon 215, Leptotrichia, Fusobacteriales, Fusobacteriia, Fusobacteria, Bacteria

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187514..188206
DNA (693bp) protein (231aa)
HAD hydrolase family n=1 Tax=Leptotrichia sp. oral taxon 215 str. W9775 RepID=U2RK29_9FUSO
HAD hydrolase family {ECO:0000313|EMBL:ERK68924.1}; TaxID=1321779 species="Bacteria; Fusobacteria; Fusobacteriales; Leptotrichiaceae; Leptotrichia.;" source="Leptotrichia sp. oral taxon 215 str. W9775.;"
HAD superfamily hydrolase; K07025 putative hydrolase of the HAD superfamily
SCNpilot_bf_inoc_scaffold_11_curated_160
GWE2_Bacteroidetes_32_14_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

188267..188926
DNA (660bp) protein (220aa)
Putative uncharacterized protein id=3692493 bin=GWF2_Bacteroidetes_33_16 species=Fulvivirga imtechensis genus=Fulvivirga taxon_order=Cytophagales taxon_class=Cytophagia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_33_16 organism_group=Bacteroidetes organism_desc=Good
hypothetical protein
Tax=GWE2_Bacteroidetes_32_14_curated
SCNpilot_bf_inoc_scaffold_11_curated_161
[Clostridium] litorale, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(189029..190810)
DNA (1782bp) protein (594aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1121324 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="[Clostridium] litorale DSM 5388.;"
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein n=1 Tax=Clostridiales bacterium oral taxon 876 str. F0540 RepID=U2DDF9_9FIRM
ATP-binding protein
SCNpilot_bf_inoc_scaffold_11_curated_162
[Clostridium] litorale, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(190794..191483)
DNA (690bp) protein (230aa)
Predicted transcriptional regulator n=2 Tax=Clostridium RepID=D8GUD1_CLOLD
Two component transcriptional regulator, winged helix family {ECO:0000313|EMBL:KDR96689.1}; TaxID=1121324 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="[Clostridium] litorale DSM 5388.;"
two component transcriptional regulator, winged helix family
SCNpilot_bf_inoc_scaffold_11_curated_163

Not on your lists

comp(191589..192092)
DNA (504bp) protein (168aa)
Ubiquitin-associated-domain-containing protein n=1 Tax=uncultured bacterium (gcode 4) RepID=K2F865_9BACT
Ubiquitin-associated-domain-containing protein {ECO:0000313|EMBL:EKE27371.1}; TaxID=1234023 species="Bacteria; environmental samples.;" source="uncultured bacterium (gcode 4).;"
hypothetical protein
SCNpilot_bf_inoc_scaffold_11_curated_164
Clostridium aceticum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(192183..192653)
DNA (471bp) protein (157aa)
UBA/TS-N domain n=2 Tax=Clostridium butyricum RepID=B1QWZ5_CLOBU
Ubiquitin {ECO:0000313|EMBL:KJF25673.1}; TaxID=84022 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium aceticum.;"
transcription factor
SCNpilot_bf_inoc_scaffold_11_curated_165
BJP_IG2157_Clostridiales_35_16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

193053..194216
DNA (1164bp) protein (388aa)
Major facilitator superfamily MFS_1 n=1 Tax=Clostridium phytofermentans (strain ATCC 700394 / DSM 18823 / ISDg) RepID=A9KJL6_CLOPH
major facilitator transporter
Tax=BJP_IG2157_Clostridiales_35_16
SCNpilot_bf_inoc_scaffold_11_curated_166
Bacillus selenatarsenatis, Bacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(194206..194742)
DNA (537bp) protein (179aa)
GTP pyrophosphokinase , (P)ppGpp synthetase II/guanosine-3',5'-bis(Diphosphate) 3'-pyrophosphohydrolase {ECO:0000313|EMBL:GAM13187.1}; EC=2.7.6.5 {ECO:0000313|EMBL:GAM13187.1};; EC=3.1.7.2 {ECO:0000313|EMBL:GAM13187.1};; TaxID=1321606 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus.;" source="Bacillus selenatarsenatis SF-1.;"
GTP pyrophosphokinase (EC:2.7.6.5 3.1.7.2); K00951 GTP pyrophosphokinase [EC:2.7.6.5]; K01139 guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase [EC:3.1.7.2]
phosphohydrolase n=1 Tax=Bacillus sp. 10403023 RepID=UPI0002895096
SCNpilot_bf_inoc_scaffold_11_curated_167
Intestinibacter bartlettii, Intestinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

194830..195201
DNA (372bp) protein (124aa)
Holo-[acyl-carrier-protein] synthase {ECO:0000256|HAMAP-Rule:MF_00101, ECO:0000256|SAAS:SAAS00237208}; Short=Holo-ACP synthase {ECO:0000256|HAMAP-Rule:MF_00101};; EC=2.7.8.7 {ECO:0000256|HAMAP-Rule:MF_00101};; 4'-phosphopantetheinyl transferase AcpS {ECO:0000256|HAMAP-Rule:MF_00101}; TaxID=445973 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Intestinibacter.;" source="Intestinibacter bartlettii DSM 16795.;"
acpS; 4'-phosphopantetheinyl transferase; K00997 holo-[acyl-carrier protein] synthase [EC:2.7.8.7]
Holo-[acyl-carrier-protein] synthase n=2 Tax=Clostridiales RepID=B0AD43_9FIRM
SCNpilot_bf_inoc_scaffold_11_curated_168
Arcobacter nitrofigilis, Arcobacter, Campylobacterales, Epsilonproteobacteria, Proteobacteria, Bacteria

Not on your lists

195275..196447
DNA (1173bp) protein (391aa)
alanine racemase (EC:5.1.1.1); K01775 alanine racemase [EC:5.1.1.1]
Alanine racemase {ECO:0000256|HAMAP-Rule:MF_01201, ECO:0000256|SAAS:SAAS00021659}; EC=5.1.1.1 {ECO:0000256|HAMAP-Rule:MF_01201, ECO:0000256|SAAS:SAAS00021659};; TaxID=572480 species="Bacteria; Proteobacteria; Epsilonproteobacteria; Campylobacterales; Campylobacteraceae; Arcobacter.;" source="Arcobacter nitrofigilis (strain ATCC 33309 / DSM 7299 / LMG 7604 /; NCTC 12251 / CI) (Campylobacter nitrofigilis).;"
Alanine racemase n=1 Tax=Arcobacter nitrofigilis (strain ATCC 33309 / DSM 7299 / LMG 7604 / NCTC 12251 / CI) RepID=D5V329_ARCNC
SCNpilot_bf_inoc_scaffold_11_curated_169
Clostridium aceticum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

196531..196905
DNA (375bp) protein (125aa)
mRNA interferase {ECO:0000256|PIRNR:PIRNR033490}; EC=3.1.-.- {ECO:0000256|PIRNR:PIRNR033490};; TaxID=84022 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium aceticum.;"
transcriptional modulator of MazE/toxin, MazF; K07171 mRNA interferase [EC:3.1.-.-]
mRNA interferase n=1 Tax=Bacillus cellulosilyticus (strain ATCC 21833 / DSM 2522 / FERM P-1141 / JCM 9156 / N-4) RepID=E6TV44_BACCJ
SCNpilot_bf_inoc_scaffold_11_curated_170
Gottschalkia acidurici, Gottschalkia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

196935..199118
DNA (2184bp) protein (728aa)
Uncharacterized protein n=1 Tax=Clostridium acidurici (strain ATCC 7906 / DSM 604 / KCTC 5404 / 9a) RepID=K0AZ61_CLOA9
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFS79083.1}; TaxID=1128398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Gottschalkia.;" source="Clostridium acidurici (strain ATCC 7906 / DSM 604 / KCTC 5404 / 9a).;"
SCNpilot_bf_inoc_scaffold_11_curated_171
Gottschalkia acidurici, Gottschalkia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

199111..200196
DNA (1086bp) protein (362aa)
Polysaccharide pyruvyl transferase n=1 Tax=Clostridium acidurici (strain ATCC 7906 / DSM 604 / KCTC 5404 / 9a) RepID=K0B1T8_CLOA9
polysaccharide pyruvyl transferase
Polysaccharide pyruvyl transferase {ECO:0000313|EMBL:AFS79082.1}; TaxID=1128398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Gottschalkia.;" source="Clostridium acidurici (strain ATCC 7906 / DSM 604 / KCTC 5404 / 9a).;"
SCNpilot_bf_inoc_scaffold_11_curated_172
Alkaliphilus metalliredigens, Alkaliphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

200210..200950
DNA (741bp) protein (247aa)
WecB/TagA/CpsF family glycosyl transferase (EC:2.4.1.187); K05946 N-acetylglucosaminyldiphosphoundecaprenol [EC:2.4.1.187]
Glycosyl transferase, WecB/TagA/CpsF family {ECO:0000313|EMBL:ABR50220.1}; EC=2.4.1.187 {ECO:0000313|EMBL:ABR50220.1};; TaxID=293826 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Alkaliphilus.;" source="Alkaliphilus metalliredigens (strain QYMF).;"
Glycosyl transferase, WecB/TagA/CpsF family n=1 Tax=Alkaliphilus metalliredigens (strain QYMF) RepID=A6TVK2_ALKMQ
SCNpilot_bf_inoc_scaffold_11_curated_173
BJP_IG2102_Clostridiales_34_350, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


200972..202123
DNA (1152bp) protein (384aa)
Predicted 30S ribosomal protein S1 n=1 Tax=Clostridium ljungdahlii (strain ATCC 55383 / DSM 13528 / PETC) RepID=D8GNN9_CLOLD
RNA binding S1 domain protein
Tax=BJP_IG2102_Clostridiales_34_350
SCNpilot_bf_inoc_scaffold_11_curated_174
Gottschalkia acidurici, Gottschalkia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

202263..204716
DNA (2454bp) protein (818aa)
peptidase S16 with C-terminal Lon domain (EC:3.4.21.-)
Peptidase S16 with C-terminal Lon domain {ECO:0000313|EMBL:AFS79551.1}; EC=3.4.21.- {ECO:0000313|EMBL:AFS79551.1};; TaxID=1128398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Gottschalkia.;" source="Clostridium acidurici (strain ATCC 7906 / DSM 604 / KCTC 5404 / 9a).;"
Peptidase S16 with C-terminal Lon domain n=1 Tax=Clostridium acidurici (strain ATCC 7906 / DSM 604 / KCTC 5404 / 9a) RepID=K0B4Q3_CLOA9
SCNpilot_bf_inoc_scaffold_11_curated_175
Desulfitobacterium dichloroeliminans, Desulfitobacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(204706..205278)
DNA (573bp) protein (191aa)
5-formyltetrahydrofolate cyclo-ligase {ECO:0000256|RuleBase:RU361279}; EC=6.3.3.2 {ECO:0000256|RuleBase:RU361279};; TaxID=871963 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Desulfitobacterium.;" source="Desulfitobacterium dichloroeliminans (strain LMG P-21439 / DCA1).;"
5-formyltetrahydrofolate cyclo-ligase n=1 Tax=Desulfitobacterium dichloroeliminans (strain LMG P-21439 / DCA1) RepID=L0F4C7_DESDL
5-formyltetrahydrofolate cyclo-ligase
SCNpilot_bf_inoc_scaffold_11_curated_176
Caldisalinibacter kiritimatiensis, Caldisalinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

205462..206148
DNA (687bp) protein (229aa)
Cell division transporter, ATP-binding protein FtsE n=1 Tax=Clostridiaceae bacterium L21-TH-D2 RepID=R1CB69_9CLOT
Cell division transporter, ATP-binding protein FtsE {ECO:0000313|EMBL:EOC99549.1}; TaxID=1304284 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Caldisalinibacter.;" source="Caldisalinibacter kiritimatiensis.;"
ftsE; cell division ATP-binding protein ftsE; K09812 cell division transport system ATP-binding protein rbh
SCNpilot_bf_inoc_scaffold_11_curated_177
Alkaliphilus metalliredigens, Alkaliphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

206138..207031
DNA (894bp) protein (298aa)
Cell division protein FtsX n=1 Tax=Alkaliphilus metalliredigens (strain QYMF) RepID=A6TVJ3_ALKMQ
hypothetical protein; K09811 cell division transport system permease protein
Cell division protein FtsX {ECO:0000256|PIRNR:PIRNR003097}; Flags: Precursor;; TaxID=293826 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Alkaliphilus.;" source="Alkaliphilus metalliredigens (strain QYMF).;"
SCNpilot_bf_inoc_scaffold_11_curated_178
Caloranaerobacter azorensis, Caloranaerobacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

207041..208180
DNA (1140bp) protein (380aa)
Membrane protein n=1 Tax=Clostridiaceae bacterium L21-TH-D2 RepID=R1ASC6_9CLOT
Peptidase M23 {ECO:0000313|EMBL:KGG80243.1}; TaxID=1156417 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Caloranaerobacter.;" source="Caloranaerobacter azorensis H53214.;"
peptidase M23B
SCNpilot_bf_inoc_scaffold_11_curated_179
Caloranaerobacter azorensis, Caloranaerobacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

208191..209408
DNA (1218bp) protein (406aa)
carboxyl-terminal protease (EC:3.4.21.102); K03797 carboxyl-terminal processing protease [EC:3.4.21.102]
Carboxyl-terminal protease n=1 Tax=Clostridiaceae bacterium L21-TH-D2 RepID=R1AQZ6_9CLOT
Peptidase S41 {ECO:0000313|EMBL:KGG80242.1}; TaxID=1156417 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Caloranaerobacter.;" source="Caloranaerobacter azorensis H53214.;"
SCNpilot_bf_inoc_scaffold_11_curated_180
unknown

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209425..209625
DNA (201bp) protein (67aa)

This feature has no annotations

Displaying items 151-180 of 321 in total

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