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SCNpilot_bf_inoc_scaffold_38_curated

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Displaying items 61-90 of 634 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_bf_inoc_scaffold_38_curated_61
RIFOXYA1_FULL_Xanthomonadales_69_10_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(64577..65050)
DNA (474bp) protein (158aa)
Poly granule associated protein n=1 Tax=Acidovorax sp. NO-1 RepID=H0C4I2_9BURK
poly granule associated protein
Tax=RIFOXYA1_FULL_Xanthomonadales_69_10_curated
SCNpilot_bf_inoc_scaffold_38_curated_62
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(65206..65910)
DNA (705bp) protein (235aa)
Leucyl/phenylalanyl-tRNA--protein transferase {ECO:0000256|HAMAP-Rule:MF_00688, ECO:0000256|SAAS:SAAS00088489}; EC=2.3.2.6 {ECO:0000256|HAMAP-Rule:MF_00688, ECO:0000256|SAAS:SAAS00088482};; L/F-transferase {ECO:0000256|HAMAP-Rule:MF_00688}; Leucyltransferase {ECO:0000256|HAMAP-Rule:MF_00688}; Phenyalanyltransferase {ECO:0000256|HAMAP-Rule:MF_00688}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;"
leucyl/phenylalanyl-tRNA--protein transferase; K00684 leucyl/phenylalanyl-tRNA--protein transferase [EC:2.3.2.6]
Leucyl/phenylalanyl-tRNA--protein transferase n=1 Tax=Rhodanobacter sp. 115 RepID=I4W0M8_9GAMM
SCNpilot_bf_inoc_scaffold_38_curated_63
Oleiagrimonas soli, Oleiagrimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(65913..67100)
DNA (1188bp) protein (396aa)
hypothetical protein n=1 Tax=Dyella japonica RepID=UPI000311F2CA
Uncharacterized protein {ECO:0000313|EMBL:KGI77438.1}; TaxID=1543381 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Oleiagrimonas.;" source="Oleiagrimonas soli.;"
hypothetical protein
SCNpilot_bf_inoc_scaffold_38_curated_64
Terrabacter sp. 28, Terrabacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

67197..68534
DNA (1338bp) protein (446aa)
adenylyl cyclase n=1 Tax=Ornithinimicrobium pekingense RepID=UPI0003B4FFAB
Uncharacterized protein {ECO:0000313|EMBL:KJK11492.1}; TaxID=1619947 species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Terrabacter.;" source="Terrabacter sp. 28.;"
adenylate/guanylate cyclase
SCNpilot_bf_inoc_scaffold_38_curated_65
Oleiagrimonas soli, Oleiagrimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(68547..69509)
DNA (963bp) protein (321aa)
Thioredoxin reductase {ECO:0000256|RuleBase:RU003881}; EC=1.8.1.9 {ECO:0000256|RuleBase:RU003881};; TaxID=1543381 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Oleiagrimonas.;" source="Oleiagrimonas soli.;"
Thioredoxin reductase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W729_9GAMM
thioredoxin-disulfide reductase
SCNpilot_bf_inoc_scaffold_38_curated_66
Luteibacter yeojuensis, Luteibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

69724..70791
DNA (1068bp) protein (356aa)
L-alanine dehydrogenase (EC:1.4.1.1)
Alanine dehydrogenase n=1 Tax=mine drainage metagenome RepID=T1A9Q9_9ZZZZ
Alanine dehydrogenase {ECO:0000313|EMBL:KJV32539.1}; TaxID=345309 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Luteibacter.;" source="Luteibacter yeojuensis.;"
SCNpilot_bf_inoc_scaffold_38_curated_67
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

71606..73900
DNA (2295bp) protein (765aa)
DNA segregation ATPase FtsK n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W731_9GAMM
DNA segregation ATPase FtsK {ECO:0000313|EMBL:EIL95272.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
DNA segregation ATPase, FtsK/SpoIIIE family
SCNpilot_bf_inoc_scaffold_38_curated_68

Not on your lists

73976..74629
DNA (654bp) protein (218aa)
Lipoprotein chaperone n=1 Tax=Rhodanobacter denitrificans RepID=I4WXA7_9GAMM
Marine sediment metagenome DNA, contig: S03H2_L01291 {ECO:0000313|EMBL:GAH46909.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
periplasmic chaperone LolA
SCNpilot_bf_inoc_scaffold_38_curated_69
Oleiagrimonas soli, Oleiagrimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

74679..76019
DNA (1341bp) protein (447aa)
Recombination factor protein RarA n=1 Tax=Rhodanobacter denitrificans RepID=I4WXB6_9GAMM
Recombination factor protein RarA {ECO:0000313|EMBL:KGI77431.1}; TaxID=1543381 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Oleiagrimonas.;" source="Oleiagrimonas soli.;"
recombination factor protein RarA; K07478 putative ATPase
SCNpilot_bf_inoc_scaffold_38_curated_70
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(76071..76910)
DNA (840bp) protein (280aa)
Putative Glycosyl transferase, group 2 family protein {ECO:0000313|EMBL:KFC74603.1}; EC=2.-.-.- {ECO:0000313|EMBL:KFC74603.1};; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
hypothetical protein n=1 Tax=Chelatococcus sp. GW1 RepID=UPI0002F13DBE
lipopolysaccharide core biosynthesis glycosyl transferase
SCNpilot_bf_inoc_scaffold_38_curated_71
Streptosporangium roseum, Streptosporangium, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(76903..77310)
DNA (408bp) protein (136aa)
Uncharacterized protein n=1 Tax=Streptosporangium roseum (strain ATCC 12428 / DSM 43021 / JCM 3005 / NI 9100) RepID=D2BAR8_STRRD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACZ89898.1}; TaxID=479432 species="Bacteria; Actinobacteria; Streptosporangiales; Streptosporangiaceae; Streptosporangium.;" source="Streptosporangium roseum (strain ATCC 12428 / DSM 43021 / JCM 3005 /; NI 9100).;"
SCNpilot_bf_inoc_scaffold_38_curated_72
Bradyrhizobium sp. STM 3809, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(77314..78813)
DNA (1500bp) protein (500aa)
UbiD family decarboxylase; K03182 3-octaprenyl-4-hydroxybenzoate carboxy-lyase UbiD [EC:4.1.1.-]
Putative 3-polyprenyl-4-hydroxybenzoate decarboxylase n=1 Tax=Bradyrhizobium sp. STM 3809 RepID=H0SU51_9BRAD
Putative 3-polyprenyl-4-hydroxybenzoate decarboxylase {ECO:0000313|EMBL:CCD97728.1}; TaxID=551936 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. STM 3809.;"
SCNpilot_bf_inoc_scaffold_38_curated_73
Catenulispora acidiphila, Catenulispora, Catenulisporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(78908..79501)
DNA (594bp) protein (198aa)
3-octaprenyl-4-hydroxybenzoate carboxy-lyase; K03186 3-octaprenyl-4-hydroxybenzoate carboxy-lyase UbiX [EC:4.1.1.-]
Aromatic acid decarboxylase {ECO:0000256|RuleBase:RU362054}; EC=4.1.1.- {ECO:0000256|RuleBase:RU362054};; TaxID=479433 species="Bacteria; Actinobacteria; Catenulisporales; Catenulisporaceae; Catenulispora.;" source="Catenulispora acidiphila (strain DSM 44928 / NRRL B-24433 / NBRC; 102108 / JCM 14897).;"
3-octaprenyl-4-hydroxybenzoate carboxy-lyase n=1 Tax=Catenulispora acidiphila (strain DSM 44928 / NRRL B-24433 / NBRC 102108 / JCM 14897) RepID=C7QBT9_CATAD
SCNpilot_bf_inoc_scaffold_38_curated_74
Oleiagrimonas soli, Oleiagrimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(79652..80188)
DNA (537bp) protein (179aa)
Transcriptional repressor MprA (Fragment) n=1 Tax=mine drainage metagenome RepID=T1BR46_9ZZZZ
Uncharacterized protein {ECO:0000313|EMBL:KGI78121.1}; TaxID=1543381 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Oleiagrimonas.;" source="Oleiagrimonas soli.;"
transcriptional regulator
SCNpilot_bf_inoc_scaffold_38_curated_75
RLO_Deltaproteobacteria_60_16, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(80192..80788)
DNA (597bp) protein (199aa)
Sortase-like acyltransferase n=1 Tax=Terriglobus roseus (strain DSM 18391 / NRRL B-41598 / KBS 63) RepID=I3ZMD8_TERRK
sortase
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_16_curated
SCNpilot_bf_inoc_scaffold_38_curated_76
Nitrosococcus watsonii, Nitrosococcus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

80875..81507
DNA (633bp) protein (211aa)
NmrA family protein n=1 Tax=Nitrosococcus watsoni (strain C-113) RepID=D8KAK7_NITWC
NmrA family protein
NmrA family protein {ECO:0000313|EMBL:ADJ29434.1}; TaxID=105559 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Chromatiaceae; Nitrosococcus.;" source="Nitrosococcus watsoni (strain C-113).;"
SCNpilot_bf_inoc_scaffold_38_curated_77
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

81758..82141
DNA (384bp) protein (128aa)
Uncharacterized protein n=2 Tax=Rhodospirillum rubrum RepID=Q2RTD7_RHORT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:KIZ47584.1}; TaxID=1076 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris.;"
SCNpilot_bf_inoc_scaffold_38_curated_78
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(82166..82651)
DNA (486bp) protein (162aa)
Uncharacterized protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VU47_9GAMM
hypothetical protein
Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
SCNpilot_bf_inoc_scaffold_38_curated_79
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

82843..83949
DNA (1107bp) protein (369aa)
Signal transduction histidine kinase LytS n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VU49_9GAMM
Signal transduction histidine kinase LytS {ECO:0000313|EMBL:EIL90740.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
signal transduction histidine kinase LytS
SCNpilot_bf_inoc_scaffold_38_curated_80
Mizugakiibacter sediminis, Mizugakiibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

83952..84701
DNA (750bp) protein (250aa)
hypothetical protein n=1 Tax=Dyella japonica RepID=UPI0002D7B975
LytTR family two component transcriptional regulator {ECO:0000313|EMBL:GAN44963.1}; TaxID=1475481 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Mizugakiibacter.;" source="Mizugakiibacter sediminis.;"
lytT1; Sensory transduction protein lytT
SCNpilot_bf_inoc_scaffold_38_curated_81
Mizugakiibacter sediminis, Mizugakiibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

84827..85855
DNA (1029bp) protein (343aa)
hypothetical protein n=1 Tax=Dyella japonica RepID=UPI00030D11F6
Uncharacterized protein {ECO:0000313|EMBL:GAN44959.1}; TaxID=1475481 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Mizugakiibacter.;" source="Mizugakiibacter sediminis.;"
periplasmic component of the Tol biopolymer transport system
SCNpilot_bf_inoc_scaffold_38_curated_82
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

86048..87028
DNA (981bp) protein (327aa)
Uncharacterized protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VU59_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL90750.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
periplasmic component of the Tol biopolymer transport system
SCNpilot_bf_inoc_scaffold_38_curated_83
Dyella japonica, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

87106..88023
DNA (918bp) protein (306aa)
hypothetical protein n=1 Tax=Dyella japonica RepID=UPI00030D11F6
Uncharacterized protein {ECO:0000313|EMBL:AIF46718.1}; TaxID=1217721 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella japonica A8.;"
periplasmic component of the Tol biopolymer transport system
SCNpilot_bf_inoc_scaffold_38_curated_84
R_Gammaproteobacteria_63_22, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

88132..88713
DNA (582bp) protein (194aa)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI0003769D12
hypothetical protein
Tax=RIFCSPHIGHO2_12_FULL_Gammaproteobacteria_63_22_curated
SCNpilot_bf_inoc_scaffold_38_curated_85
Dyella jiangningensis, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

88819..90111
DNA (1293bp) protein (431aa)
Serine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00176}; EC=6.1.1.11 {ECO:0000256|HAMAP-Rule:MF_00176};; Seryl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00176}; Seryl-tRNA(Ser/Sec) synthetase {ECO:0000256|HAMAP-Rule:MF_00176}; TaxID=1379159 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella jiangningensis.;"
seryl-tRNA synthetase; K01875 seryl-tRNA synthetase [EC:6.1.1.11]
seryl-tRNA synthetase n=1 Tax=Dyella ginsengisoli RepID=UPI00034C809B
SCNpilot_bf_inoc_scaffold_38_curated_86
Methylobacterium nodulans, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

90524..92818
DNA (2295bp) protein (765aa)
Oxidoreductase alpha (Molybdopterin) subunit n=1 Tax=Methylobacterium nodulans (strain ORS2060 / LMG 21967) RepID=B8IHG3_METNO
oxidoreductase alpha (molybdopterin) subunit
Oxidoreductase alpha (Molybdopterin) subunit {ECO:0000313|EMBL:ACL61626.1}; TaxID=460265 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium nodulans (strain ORS2060 / LMG 21967).;"
SCNpilot_bf_inoc_scaffold_38_curated_87
Dyella japonica, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(93043..93624)
DNA (582bp) protein (194aa)
FMN-dependent NADH-azoreductase {ECO:0000256|HAMAP-Rule:MF_01216}; EC=1.7.-.- {ECO:0000256|HAMAP-Rule:MF_01216};; Azo-dye reductase {ECO:0000256|HAMAP-Rule:MF_01216}; FMN-dependent NADH-azo compound oxidoreductase {ECO:0000256|HAMAP-Rule:MF_01216}; TaxID=1217721 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella japonica A8.;"
hypothetical protein n=1 Tax=Dyella japonica RepID=UPI0002D90638
acyl carrier protein phosphodiesterase
SCNpilot_bf_inoc_scaffold_38_curated_88
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

93736..94659
DNA (924bp) protein (308aa)
Transcriptional regulator n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VW78_9GAMM
Transcriptional regulator {ECO:0000313|EMBL:EIL91469.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
transcriptional regulator
SCNpilot_bf_inoc_scaffold_38_curated_89

Not on your lists

94730..95875
DNA (1146bp) protein (382aa)
aminotransferase n=1 Tax=Rudaea cellulosilytica RepID=UPI000378ADB5
Aminotransferase class I and II {ECO:0000313|EMBL:EQD70959.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
aspartate/tyrosine/aromatic aminotransferase
SCNpilot_bf_inoc_scaffold_38_curated_90
Pseudoxanthomonas suwonensis, Pseudoxanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

95932..96726
DNA (795bp) protein (265aa)
Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase n=1 Tax=Pseudoxanthomonas suwonensis (strain 11-1) RepID=E6WSW7_PSEUU
nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; K08590 carbon-nitrogen hydrolase family protein
Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase {ECO:0000313|EMBL:ADV27123.1}; TaxID=743721 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Pseudoxanthomonas.;" source="Pseudoxanthomonas suwonensis (strain 11-1).;"
Displaying items 61-90 of 634 in total

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