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SCNpilot_bf_inoc_scaffold_16_curated

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Displaying items 271-300 of 540 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_bf_inoc_scaffold_16_curated_271
Mizugakiibacter sediminis, Mizugakiibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

331653..332624
DNA (972bp) protein (324aa)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI000360C75A
Uncharacterized protein {ECO:0000313|EMBL:GAN45937.1}; TaxID=1475481 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Mizugakiibacter.;" source="Mizugakiibacter sediminis.;"
hypothetical protein
SCNpilot_bf_inoc_scaffold_16_curated_272
Oleiagrimonas soli, Oleiagrimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

332624..334591
DNA (1968bp) protein (656aa)
Transglutaminase n=1 Tax=Rhodanobacter denitrificans RepID=I4WLP6_9GAMM
Transglutaminase {ECO:0000313|EMBL:KGI77997.1}; TaxID=1543381 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Oleiagrimonas.;" source="Oleiagrimonas soli.;"
transglutaminase-like enzyme, predicted cysteine protease
SCNpilot_bf_inoc_scaffold_16_curated_273
Luteibacter yeojuensis, Luteibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

334669..335241
DNA (573bp) protein (191aa)
membrane protein n=1 Tax=Dyella ginsengisoli RepID=UPI0003477533
Membrane protein {ECO:0000313|EMBL:KJV36938.1}; TaxID=345309 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Luteibacter.;" source="Luteibacter yeojuensis.;"
outer membrane protein Slp; K07285 outer membrane lipoprotein
SCNpilot_bf_inoc_scaffold_16_curated_274
Lysobacter arseniciresistens, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(335322..335666)
DNA (345bp) protein (115aa)
HIT family hydrolase, diadenosine tetraphosphate hydrolase n=1 Tax=Frateuria aurantia (strain ATCC 33424 / DSM 6220 / NBRC 3245 / NCIMB 13370) RepID=H8L5R6_FRAAD
Histidine triad (HIT) protein {ECO:0000313|EMBL:KGM57115.1}; TaxID=913325 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter arseniciresistens ZS79.;"
HIT family hydrolase, diadenosine tetraphosphate hydrolase
SCNpilot_bf_inoc_scaffold_16_curated_275
Luteibacter yeojuensis, Luteibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(335675..336277)
DNA (603bp) protein (201aa)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI0003688063
Recombination protein RecR {ECO:0000256|HAMAP-Rule:MF_00017, ECO:0000256|SAAS:SAAS00012243}; TaxID=345309 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Luteibacter.;" source="Luteibacter yeojuensis.;"
recombination protein RecR; K06187 recombination protein RecR
SCNpilot_bf_inoc_scaffold_16_curated_276
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(336432..336755)
DNA (324bp) protein (108aa)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI00037F0E2A
Nucleoid-associated protein UU5_10788 {ECO:0000256|HAMAP-Rule:MF_00274}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;"
DNA-binding protein, YbaB/EbfC family
SCNpilot_bf_inoc_scaffold_16_curated_277
Stenotrophomonas rhizophila, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(336831..338759)
DNA (1929bp) protein (643aa)
DNA polymerase III subunits gamma and tau; K02343 DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
DNA polymerase III subunits gamma and tau n=1 Tax=Pseudoxanthomonas spadix (strain BD-a59) RepID=G7UQI3_PSEUP
DNA polymerase III subunit gamma/tau {ECO:0000313|EMBL:AHY60061.1}; TaxID=216778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas rhizophila.;"
SCNpilot_bf_inoc_scaffold_16_curated_278
Hydrocarboniphaga effusa, Hydrocarboniphaga, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

339152..339673
DNA (522bp) protein (174aa)
fdsG; formate dehydrogenase subunit gamma (EC:1.2.1.2); K00127 formate dehydrogenase, gamma subunit
NADH dehydrogenase (Ubiquinone), 24 kDa subunit n=1 Tax=Hydrocarboniphaga effusa AP103 RepID=I7Z8W7_9GAMM
NADH dehydrogenase (Ubiquinone), 24 kDa subunit {ECO:0000313|EMBL:EIT68274.1}; TaxID=1172194 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Sinobacteraceae; Hydrocarboniphaga.;" source="Hydrocarboniphaga effusa AP103.;"
SCNpilot_bf_inoc_scaffold_16_curated_279
Oleiagrimonas soli, Oleiagrimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

339670..341208
DNA (1539bp) protein (513aa)
NADH dehydrogenase (quinone) (EC:1.2.1.2); K00124 formate dehydrogenase, beta subunit
NADH dehydrogenase (Quinone) n=1 Tax=Methylibium petroleiphilum (strain PM1) RepID=A2SM73_METPP
Formate dehydrogenase {ECO:0000313|EMBL:KGI79012.1}; TaxID=1543381 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Oleiagrimonas.;" source="Oleiagrimonas soli.;"
SCNpilot_bf_inoc_scaffold_16_curated_280
Oleiagrimonas soli, Oleiagrimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

341279..344128
DNA (2850bp) protein (950aa)
fdsA; NAD-dependent formate dehydrogenase subunit alpha; K00123 formate dehydrogenase, alpha subunit [EC:1.2.1.2]
formate dehydrogenase subunit alpha n=1 Tax=Dyella ginsengisoli RepID=UPI00034CE6D5
Formate dehydrogenase {ECO:0000313|EMBL:KGI79013.1}; TaxID=1543381 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Oleiagrimonas.;" source="Oleiagrimonas soli.;"
SCNpilot_bf_inoc_scaffold_16_curated_281
Xanthomonas vesicatoria, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

344136..344981
DNA (846bp) protein (282aa)
Protein FdhD homolog n=1 Tax=Xanthomonas campestris pv. raphani 756C RepID=G0CH71_XANCA
Formate dehydrogenase {ECO:0000313|EMBL:KHM90782.1}; TaxID=56460 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas vesicatoria.;"
fdhD; formate dehydrogenase family accessory protein FdhD; K02379 FdhD protein
SCNpilot_bf_inoc_scaffold_16_curated_282
Oleiagrimonas soli, Oleiagrimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

345002..345196
DNA (195bp) protein (65aa)
formate dehydrogenase subunit delta (EC:1.2.1.2); K00126 formate dehydrogenase, delta subunit [EC:1.2.1.2]
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI000360CD3F
Formate dehydrogenase subunit delta {ECO:0000313|EMBL:KGI79015.1}; TaxID=1543381 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Oleiagrimonas.;" source="Oleiagrimonas soli.;"
SCNpilot_bf_inoc_scaffold_16_curated_283
Pseudoxanthomonas suwonensis, Pseudoxanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(346143..346571)
DNA (429bp) protein (143aa)
moaE; molybdopterin-converting factor subunit 2; K03635 molybdopterin synthase catalytic subunit [EC:2.-.-.-]
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI0003661945
Molybdopterin-converting factor chain 2 {ECO:0000313|EMBL:AKC85734.1}; TaxID=314722 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Pseudoxanthomonas.;" source="Pseudoxanthomonas suwonensis.;"
SCNpilot_bf_inoc_scaffold_16_curated_284
Pseudoxanthomonas suwonensis, Pseudoxanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(346568..346807)
DNA (240bp) protein (80aa)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI00035DB0AB
Molybdopterin biosynthesis protein D chain {ECO:0000313|EMBL:AKC85735.1}; TaxID=314722 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Pseudoxanthomonas.;" source="Pseudoxanthomonas suwonensis.;"
moaD; molybdopterin-converting factor subunit 1; K03636 molybdopterin synthase sulfur carrier subunit
SCNpilot_bf_inoc_scaffold_16_curated_285
Lysobacter capsici, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(346816..347310)
DNA (495bp) protein (165aa)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI00036A3EB1
Molybdenum cofactor biosynthesis protein MoaC {ECO:0000313|EMBL:EYR66617.1}; TaxID=1444315 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter capsici AZ78.;"
moaC; molybdenum cofactor biosynthesis protein MoaC; K03637 molybdenum cofactor biosynthesis protein C
SCNpilot_bf_inoc_scaffold_16_curated_286
Xanthomonas sacchari, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(347312..348355)
DNA (1044bp) protein (348aa)
Cyclic pyranopterin monophosphate synthase {ECO:0000256|HAMAP-Rule:MF_01225}; EC=4.1.99.18 {ECO:0000256|HAMAP-Rule:MF_01225};; Molybdenum cofactor biosynthesis protein A {ECO:0000256|HAMAP-Rule:MF_01225}; TaxID=56458 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas sacchari.;"
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI00036923E1
molybdenum cofactor biosynthesis protein A; K03639 molybdenum cofactor biosynthesis protein
SCNpilot_bf_inoc_scaffold_16_curated_287
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(348355..349128)
DNA (774bp) protein (258aa)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI000372795E
Beta-lactamase superfamily metal-dependent hydrolase {ECO:0000313|EMBL:EIL92192.1}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;"
metal-dependent hydrolase, beta-lactamase superfamily III
SCNpilot_bf_inoc_scaffold_16_curated_288
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(349133..349969)
DNA (837bp) protein (279aa)
3-deoxy-D-manno-octulosonic acid kinase {ECO:0000256|HAMAP-Rule:MF_00521}; Short=Kdo kinase {ECO:0000256|HAMAP-Rule:MF_00521};; EC=2.7.1.166 {ECO:0000256|HAMAP-Rule:MF_00521};; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
3-deoxy-D-manno-octulosonic acid kinase n=1 Tax=Rhodanobacter denitrificans RepID=M4NG09_9GAMM
Mn2+-dependent serine/threonine protein kinase
SCNpilot_bf_inoc_scaffold_16_curated_289
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

349974..351035
DNA (1062bp) protein (354aa)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI000364D200
ADP-heptose:LPS heptosyltransferase
ADP-heptose:LPS heptosyltransferase {ECO:0000313|EMBL:AGG88577.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
SCNpilot_bf_inoc_scaffold_16_curated_290
Oleiagrimonas soli, Oleiagrimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(351060..351455)
DNA (396bp) protein (132aa)
hypothetical protein n=1 Tax=Dyella japonica RepID=UPI000310F7E4
Uncharacterized protein {ECO:0000313|EMBL:KGI77587.1}; TaxID=1543381 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Oleiagrimonas.;" source="Oleiagrimonas soli.;"
hypothetical protein
SCNpilot_bf_inoc_scaffold_16_curated_291
Arenimonas donghaensis, Arenimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

351937..352638
DNA (702bp) protein (234aa)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI000367EA75
Uncharacterized protein {ECO:0000313|EMBL:KFL35555.1}; TaxID=1121014 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Arenimonas.;" source="Arenimonas donghaensis DSM 18148 = HO3-R19.;"
protein phosphatase
SCNpilot_bf_inoc_scaffold_16_curated_292
Limnobacter sp. MED105, Limnobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(353126..354442)
DNA (1317bp) protein (439aa)
hypothetical protein n=1 Tax=Janthinobacterium sp. CG3 RepID=UPI00037DA2F6
Uncharacterized protein {ECO:0000313|EMBL:EDM82999.1}; TaxID=391597 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Limnobacter.;" source="Limnobacter sp. MED105.;"
hypothetical protein
SCNpilot_bf_inoc_scaffold_16_curated_293
Luteibacter yeojuensis, Luteibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(354825..355562)
DNA (738bp) protein (246aa)
DNA polymerase III, epsilon subunit (EC:2.7.7.7)
DNA polymerase III subunit epsilon n=1 Tax=Rhodanobacter denitrificans RepID=I4WR67_9GAMM
DNA polymerase III subunit epsilon {ECO:0000313|EMBL:KJV36981.1}; TaxID=345309 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Luteibacter.;" source="Luteibacter yeojuensis.;"
SCNpilot_bf_inoc_scaffold_16_curated_294
Dyella jiangningensis, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(355562..356014)
DNA (453bp) protein (151aa)
Ribonuclease H {ECO:0000256|HAMAP-Rule:MF_00042, ECO:0000256|SAAS:SAAS00016437}; Short=RNase H {ECO:0000256|HAMAP-Rule:MF_00042};; EC=3.1.26.4 {ECO:0000256|HAMAP-Rule:MF_00042, ECO:0000256|SAAS:SAAS00016437};; TaxID=1379159 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella jiangningensis.;"
RNaseH ribonuclease n=1 Tax=Rudaea cellulosilytica RepID=UPI0003757356
ribonuclease HI
SCNpilot_bf_inoc_scaffold_16_curated_295
Luteibacter yeojuensis, Luteibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(356011..356673)
DNA (663bp) protein (221aa)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI00037E458C
Uncharacterized protein {ECO:0000313|EMBL:KJV36983.1}; TaxID=345309 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Luteibacter.;" source="Luteibacter yeojuensis.;"
SCNpilot_bf_inoc_scaffold_16_curated_296
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

356873..357652
DNA (780bp) protein (260aa)
Hydroxyacylglutathione hydrolase {ECO:0000256|HAMAP-Rule:MF_01374, ECO:0000256|SAAS:SAAS00035352}; EC=3.1.2.6 {ECO:0000256|HAMAP-Rule:MF_01374, ECO:0000256|SAAS:SAAS00035352};; Glyoxalase II {ECO:0000256|HAMAP-Rule:MF_01374}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;"
Hydroxyacylglutathione hydrolase n=1 Tax=Rhodanobacter sp. 115 RepID=I4VN66_9GAMM
hydroxyacylglutathione hydrolase
SCNpilot_bf_inoc_scaffold_16_curated_297

Not on your lists

357649..359055
DNA (1407bp) protein (469aa)
mltD; Membrane-bound lytic murein transglycosylase D (EC:3.2.1.-)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI00037FC77F
Membrane-bound lytic murein transglycosylase D {ECO:0000313|EMBL:EQD40637.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
SCNpilot_bf_inoc_scaffold_16_curated_298
Frateuria aurantia, Frateuria, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

359279..360061
DNA (783bp) protein (261aa)
enoyl-(acyl carrier protein) reductase; K00208 enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9]
Enoyl-[acyl-carrier-protein] reductase [NADH] {ECO:0000256|PIRNR:PIRNR000094}; EC=1.3.1.9 {ECO:0000256|PIRNR:PIRNR000094};; Flags: Precursor;; TaxID=767434 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Frateuria.;" source="Frateuria aurantia (strain ATCC 33424 / DSM 6220 / NBRC 3245 / NCIMB; 13370) (Acetobacter aurantius).;"
Enoyl-[acyl-carrier-protein] reductase [NADH] n=1 Tax=Frateuria aurantia (strain ATCC 33424 / DSM 6220 / NBRC 3245 / NCIMB 13370) RepID=H8L6P5_FRAAD
SCNpilot_bf_inoc_scaffold_16_curated_299
Dyella japonica, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(360247..362151)
DNA (1905bp) protein (635aa)
Peptidylprolyl isomerase {ECO:0000256|SAAS:SAAS00143148}; EC=5.2.1.8 {ECO:0000256|SAAS:SAAS00143148};; TaxID=1217721 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella japonica A8.;"
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI0003661C18
parvulin-like peptidyl-prolyl isomerase
SCNpilot_bf_inoc_scaffold_16_curated_300
Arenimonas malthae, Arenimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(362456..362728)
DNA (273bp) protein (91aa)
Histone family protein DNA-binding protein id=2826656 bin=GWF1_Xanthomonadales_69_6 species=Pseudoxanthomonas suwonensis genus=Pseudoxanthomonas taxon_order=Xanthomonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWF1_Xanthomonadales_69_6 organism_group=Gammaproteobacteria
Transcriptional regulator {ECO:0000313|EMBL:KFN48535.1}; TaxID=1384054 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Arenimonas.;" source="Arenimonas malthae CC-JY-1.;"
histone family protein DNA-binding protein; K03530 DNA-binding protein HU-beta
Displaying items 271-300 of 540 in total

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