ggKbase home page

SCNpilot_bf_inoc_scaffold_44_curated

Search features with annotation key words

Displaying items 91-120 of 512 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_bf_inoc_scaffold_44_curated_91
unknown

Not on your lists

123283..124125
DNA (843bp) protein (281aa)

This feature has no annotations

SCNpilot_bf_inoc_scaffold_44_curated_92
unknown

Not on your lists

124303..124980
DNA (678bp) protein (226aa)
hypothetical protein, partial n=1 Tax=Oscillatoria sp. PCC 10802 RepID=UPI000376A343
SCNpilot_bf_inoc_scaffold_44_curated_93
Mizugakiibacter sediminis, Mizugakiibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(125077..125967)
DNA (891bp) protein (297aa)
HAD-superfamily hydrolase n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WGD8_9GAMM
HAD family hydrolase {ECO:0000313|EMBL:GAN45676.1}; TaxID=1475481 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Mizugakiibacter.;" source="Mizugakiibacter sediminis.;"
putative phosphatase
SCNpilot_bf_inoc_scaffold_44_curated_94
R_RIF_OP11_03_50_28, RIF-OP11-3, Microgenomates, Bacteria

Not on your lists

comp(125979..127370)
DNA (1392bp) protein (464aa)
Putative uncharacterized protein n=1 Tax=uncultured candidate division OP1 bacterium RepID=H5SH47_9BACT
hypothetical protein
Tax=RIFCSPLOWO2_01_FULL_RIF_OP11_03_50_28_curated
SCNpilot_bf_inoc_scaffold_44_curated_95
Lysobacter daejeonensis, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(127502..128674)
DNA (1173bp) protein (391aa)
Phosphoglycerate kinase {ECO:0000256|HAMAP-Rule:MF_00145, ECO:0000256|RuleBase:RU000532}; EC=2.7.2.3 {ECO:0000256|HAMAP-Rule:MF_00145, ECO:0000256|RuleBase:RU000532};; TaxID=1385517 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter daejeonensis GH1-9.;"
phosphoglycerate kinase (EC:2.7.2.3); K00927 phosphoglycerate kinase [EC:2.7.2.3]
phosphoglycerate kinase n=1 Tax=Arenimonas oryziterrae RepID=UPI0003B45DB5
SCNpilot_bf_inoc_scaffold_44_curated_96
Mizugakiibacter sediminis, Mizugakiibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

128852..129493
DNA (642bp) protein (214aa)
acyl-phosphate glycerol-3-phosphate acyltransferase; K08591 glycerol-3-phosphate acyltransferase PlsY [EC:2.3.1.15]
membrane protein n=1 Tax=Arenimonas oryziterrae RepID=UPI0003B38689
Glycerol-3-phosphate acyltransferase {ECO:0000256|HAMAP-Rule:MF_01043}; Acyl-PO4 G3P acyltransferase {ECO:0000256|HAMAP-Rule:MF_01043}; Acyl-phosphate--glycerol-3-phosphate acyltransferase {ECO:0000256|HAMAP-Rule:MF_01043}; G3P acyltransferase {ECO:0000256|HAMAP-Rule:MF_01043}; Lysophosphatidic acid synthase {ECO:0000256|HAMAP-Rule:MF_01043}; TaxID=1475481 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Mizugakiibacter.;" source="Mizugakiibacter sediminis.;"
SCNpilot_bf_inoc_scaffold_44_curated_97
Dyella japonica, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

129493..130461
DNA (969bp) protein (323aa)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI00035E69F7
Bifunctional ligase/repressor BirA {ECO:0000256|HAMAP-Rule:MF_00978}; Biotin operon repressor {ECO:0000256|HAMAP-Rule:MF_00978}; Biotin--[acetyl-CoA-carboxylase] ligase {ECO:0000256|HAMAP-Rule:MF_00978}; Biotin--protein ligase {ECO:0000256|HAMAP-Rule:MF_00978}; Biotin-[acetyl-CoA carboxylase] synthetase {ECO:0000256|HAMAP-Rule:MF_00978}; TaxID=1217721 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella japonica A8.;"
birA, biotin-(acetyl-CoA-carboxylase) ligase
SCNpilot_bf_inoc_scaffold_44_curated_98
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

130458..131222
DNA (765bp) protein (255aa)
Type III pantothenate kinase {ECO:0000256|HAMAP-Rule:MF_01274}; EC=2.7.1.33 {ECO:0000256|HAMAP-Rule:MF_01274};; PanK-III {ECO:0000256|HAMAP-Rule:MF_01274}; Pantothenic acid kinase {ECO:0000256|HAMAP-Rule:MF_01274}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
Type III pantothenate kinase n=1 Tax=Rhodanobacter denitrificans RepID=I4WMH9_9GAMM
pantothenate kinase, type III
SCNpilot_bf_inoc_scaffold_44_curated_99
Mizugakiibacter sediminis, Mizugakiibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

131527..132189
DNA (663bp) protein (221aa)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI00035CCCB2
Sporulation protein {ECO:0000313|EMBL:GAN45711.1}; TaxID=1475481 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Mizugakiibacter.;" source="Mizugakiibacter sediminis.;"
sporulation related protein
SCNpilot_bf_inoc_scaffold_44_curated_100
gamma proteobacterium HTCC5015, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

132322..133344
DNA (1023bp) protein (341aa)
Mannitol dehydrogenase {ECO:0000313|EMBL:EDY87387.1}; EC=1.1.1.255 {ECO:0000313|EMBL:EDY87387.1};; TaxID=391615 species="Bacteria; Proteobacteria; Gammaproteobacteria.;" source="gamma proteobacterium HTCC5015.;"
zinc-containing alcohol dehydrogenase superfamily protein; K12957 uncharacterized zinc-type alcohol dehydrogenase-like protein [EC:1.-.-.-]
Mannitol dehydrogenase n=1 Tax=gamma proteobacterium HTCC5015 RepID=B5JRT1_9GAMM
SCNpilot_bf_inoc_scaffold_44_curated_101
BJP_IG2103_SUB10_Xanthomonadales_61_45, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

133582..134313
DNA (732bp) protein (244aa)
disulfide isomerase; K03981 thiol:disulfide interchange protein DsbC [EC:5.3.4.1]
Disulfide isomerase id=2940872 bin=GWF1_Xanthomonadales_69_6 species=Pseudoxanthomonas spadix genus=Pseudoxanthomonas taxon_order=Xanthomonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWF1_Xanthomonadales_69_6 organism_group=Gammaproteobacteria
Tax=BJP_IG2103_SUB10_Xanthomonadales_61_45
SCNpilot_bf_inoc_scaffold_44_curated_102
Dyella japonica, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

134465..138343
DNA (3879bp) protein (1293aa)
Phosphoribosylformylglycinamidine synthase {ECO:0000256|HAMAP-Rule:MF_00419, ECO:0000256|SAAS:SAAS00064474}; Short=FGAM synthase {ECO:0000256|HAMAP-Rule:MF_00419};; Short=FGAMS {ECO:0000256|HAMAP-Rule:MF_00419};; EC=6.3.5.3 {ECO:0000256|HAMAP-Rule:MF_00419, ECO:0000256|SAAS:SAAS00064474};; Formylglycinamide ribonucleotide amidotransferase {ECO:0000256|HAMAP-Rule:MF_00419}; TaxID=1217721 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella japoni
phosphoribosylformylglycinamidine synthase (EC:6.3.5.3)
phosphoribosylformylglycinamidine synthase n=1 Tax=Dyella japonica RepID=UPI0002E3F5AF
SCNpilot_bf_inoc_scaffold_44_curated_103
Thiolapillus brandeum, Thiolapillus, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

138340..138993
DNA (654bp) protein (218aa)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI00037EB0ED
Thiolapillus brandeum DNA, complete genome {ECO:0000313|EMBL:BAO44969.1}; TaxID=1076588 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiolapillus.;" source="Thiolapillus brandeum.;"
SCNpilot_bf_inoc_scaffold_44_curated_104
Oleiagrimonas soli, Oleiagrimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

139004..140743
DNA (1740bp) protein (580aa)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI000366A89A
General secretion pathway protein GspE {ECO:0000313|EMBL:KGI78560.1}; TaxID=1543381 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Oleiagrimonas.;" source="Oleiagrimonas soli.;"
type II secretion system protein E (GspE)
SCNpilot_bf_inoc_scaffold_44_curated_105
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

140794..142011
DNA (1218bp) protein (406aa)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI00036645AB
General secretion pathway protein F {ECO:0000313|EMBL:EIL95483.1}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;"
general secretion pathway protein F
SCNpilot_bf_inoc_scaffold_44_curated_106
Halomonas anticariensis, Halomonas, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

142026..142457
DNA (432bp) protein (144aa)
Uncharacterized protein n=1 Tax=Halomonas anticariensis FP35 = DSM 16096 RepID=S2KIH8_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EPC00168.1}; TaxID=1121939 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; Halomonadaceae; Halomonas.;" source="Halomonas anticariensis FP35 = DSM 16096.;"
gspG; general secretion pathway protein G; K02456 general secretion pathway protein G
SCNpilot_bf_inoc_scaffold_44_curated_107
Oleiagrimonas soli, Oleiagrimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

142464..143003
DNA (540bp) protein (180aa)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI0003631E83
General secretion pathway protein GspH {ECO:0000313|EMBL:KGI78562.1}; TaxID=1543381 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Oleiagrimonas.;" source="Oleiagrimonas soli.;"
general secretion pathway protein H
SCNpilot_bf_inoc_scaffold_44_curated_108
Dyella jiangningensis, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

143000..143521
DNA (522bp) protein (174aa)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI00037A232E
N-terminal cleavage protein {ECO:0000313|EMBL:AHX14936.1}; TaxID=1379159 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella jiangningensis.;"
prepilin-type N-terminal cleavage/methylation domain-containing protein
SCNpilot_bf_inoc_scaffold_44_curated_109
Arenimonas composti, Arenimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

143518..144246
DNA (729bp) protein (243aa)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI00036C02CA
Uncharacterized protein {ECO:0000313|EMBL:KFN51326.1}; TaxID=1121013 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Arenimonas.;" source="Arenimonas composti TR7-09 = DSM 18010.;"
prepilin-type N-terminal cleavage/methylation domain-containing protein
SCNpilot_bf_inoc_scaffold_44_curated_110
Mizugakiibacter sediminis, Mizugakiibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

144246..145136
DNA (891bp) protein (297aa)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI000381F14B
General secretion pathway protein GspK {ECO:0000313|EMBL:GAN45824.1}; TaxID=1475481 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Mizugakiibacter.;" source="Mizugakiibacter sediminis.;"
type II secretory pathway, component PulK
SCNpilot_bf_inoc_scaffold_44_curated_111
Mizugakiibacter sediminis, Mizugakiibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

145136..146398
DNA (1263bp) protein (421aa)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI0003791C91
Fimbrial assembly protein {ECO:0000313|EMBL:GAN45825.1}; TaxID=1475481 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Mizugakiibacter.;" source="Mizugakiibacter sediminis.;"
Tfp pilus assembly protein PilN
SCNpilot_bf_inoc_scaffold_44_curated_112
Mizugakiibacter sediminis, Mizugakiibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

146373..146987
DNA (615bp) protein (205aa)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI000368C457
General secretion pathway protein M {ECO:0000313|EMBL:GAN45826.1}; TaxID=1475481 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Mizugakiibacter.;" source="Mizugakiibacter sediminis.;"
Tfp pilus assembly protein PilO
SCNpilot_bf_inoc_scaffold_44_curated_113
unknown

Not on your lists

146984..147724
DNA (741bp) protein (247aa)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI000363FBF0
SCNpilot_bf_inoc_scaffold_44_curated_114
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

147721..150024
DNA (2304bp) protein (768aa)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI0003679888
General secretion pathway protein D {ECO:0000313|EMBL:EIL89392.1}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
general secretion pathway protein D; K02453 general secretion pathway protein D
SCNpilot_bf_inoc_scaffold_44_curated_115
Nitrosococcus halophilus, Nitrosococcus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

150046..150459
DNA (414bp) protein (138aa)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI00036D4B59
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADE16670.1}; TaxID=472759 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Chromatiaceae; Nitrosococcus.;" source="Nitrosococcus halophilus (strain Nc4).;"
SCNpilot_bf_inoc_scaffold_44_curated_116
RBG_16_Gallionellales_57_15_curated, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

150624..152138
DNA (1515bp) protein (505aa)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI00036E23A0
hypothetical protein
Tax=RBG_16_Gallionellales_57_15_curated
SCNpilot_bf_inoc_scaffold_44_curated_117
unknown

Not on your lists

152561..153703
DNA (1143bp) protein (381aa)

This feature has no annotations

SCNpilot_bf_inoc_scaffold_44_curated_118
Nitrosococcus halophilus, Nitrosococcus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

153855..154799
DNA (945bp) protein (315aa)
PpiC-type peptidyl-prolyl cis-trans isomerase; K03769 peptidyl-prolyl cis-trans isomerase C [EC:5.2.1.8]
Peptidylprolyl isomerase {ECO:0000256|SAAS:SAAS00143148}; EC=5.2.1.8 {ECO:0000256|SAAS:SAAS00143148};; Flags: Precursor;; TaxID=472759 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Chromatiaceae; Nitrosococcus.;" source="Nitrosococcus halophilus (strain Nc4).;"
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI00037348C7
SCNpilot_bf_inoc_scaffold_44_curated_119
Nitrosococcus halophilus, Nitrosococcus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

154855..155661
DNA (807bp) protein (269aa)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI000377FB06
ABC transporter; K09690 lipopolysaccharide transport system permease protein
Transport permease protein {ECO:0000256|RuleBase:RU361157}; TaxID=472759 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Chromatiaceae; Nitrosococcus.;" source="Nitrosococcus halophilus (strain Nc4).;"
SCNpilot_bf_inoc_scaffold_44_curated_120
BJP_IG2103_SUB10_Xanthomonadales_61_45, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

155658..156872
DNA (1215bp) protein (405aa)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI000382AE37
ABC transporter-like protein; K09691 lipopolysaccharide transport system ATP-binding protein
Tax=BJP_IG2103_SUB10_Xanthomonadales_61_45
Displaying items 91-120 of 512 in total

View Taxonomy