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OR_07232018_dam_0_1um_Thiomonas_64_8

In projects: OR_07232018_dam_0_1um  |  Thiomonas  |  mine_tailing_impoundment_time_series  |  SOB_across_mines

Consensus taxonomy: Thiomonas  →  Burkholderiales  →  Betaproteobacteria  →  Proteobacteria  →  Bacteria

Displaying items 101-150 of 226 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
OR_07232018_dam_0_1um_scaffold_691
Genus: Thiomonas (55.56%)
9 11521 bp 61.84 6.71 91.40
OR_07232018_dam_0_1um_scaffold_1555
Genus: Thiomonas (75%)
4 6111 bp 64.11 8.30 91.46
OR_07232018_dam_0_1um_scaffold_175
Genus: Thiomonas (73.02%)
63 65377 bp 65.36 8.30 91.46
OR_07232018_dam_0_1um_scaffold_404
Genus: Thiomonas (100%)
21 17847 bp 64.27 8.40 91.46
OR_07232018_dam_0_1um_scaffold_309
Genus: Thiomonas (95%)
20 21825 bp 58.50 8.84 91.48
OR_07232018_dam_0_1um_scaffold_347
Genus: Thiomonas (91.43%)
35 33295 bp 61.03 8.42 91.64
OR_07232018_dam_0_1um_scaffold_501
Genus: Thiomonas (88.24%)
17 15063 bp 67.23 8.65 91.66
OR_07232018_dam_0_1um_scaffold_109
Genus: Thiomonas (94.44%)
54 62847 bp 64.94 8.56 91.75
OR_07232018_dam_0_1um_scaffold_439
Genus: Thiomonas (95.24%)
21 20219 bp 64.21 8.58 91.80
OR_07232018_dam_0_1um_scaffold_377
Species: Thiomonas intermedia (50%)
16 18773 bp 66.16 8.31 91.90
OR_07232018_dam_0_1um_scaffold_215
Genus: Thiomonas (87.88%)
33 33305 bp 61.97 8.18 92.06
OR_07232018_dam_0_1um_scaffold_2251
Species: Thiomonas arsenitoxydans (50%)
6 4613 bp 59.94 10.70 92.09
OR_07232018_dam_0_1um_scaffold_9902
Species: Thiomonas arsenitoxydans (50%)
2 1674 bp 64.87 5.91 92.11
OR_07232018_dam_0_1um_scaffold_425
Genus: Thiomonas (68.75%)
16 17129 bp 61.42 7.79 92.18
OR_07232018_dam_0_1um_scaffold_491
Genus: Thiomonas (87.5%)
16 15377 bp 66.18 9.37 92.30
OR_07232018_dam_0_1um_scaffold_172
Genus: Thiomonas (92.31%)
39 39582 bp 63.25 9.59 92.34
OR_07232018_dam_0_1um_scaffold_12506
Species: Thiomonas sp. CB2 (100%)
3 1436 bp 65.04 6.06 92.34
OR_07232018_dam_0_1um_scaffold_496
Species: Thiomonas arsenitoxydans (50%)
14 15194 bp 66.24 8.12 92.42
OR_07232018_dam_0_1um_scaffold_2312
Species: Thiomonas intermedia (60%)
5 4547 bp 66.20 7.75 92.43
OR_07232018_dam_0_1um_scaffold_3147
Genus: Thiomonas (83.33%)
6 3651 bp 63.41 6.45 92.44
OR_07232018_dam_0_1um_scaffold_604
Genus: Thiomonas (84.62%)
13 12987 bp 65.47 7.70 92.45
OR_07232018_dam_0_1um_scaffold_866
Genus: Thiomonas (93.33%)
15 9428 bp 60.00 9.56 92.47
OR_07232018_dam_0_1um_scaffold_1920
Species: Thiomonas arsenitoxydans (50%)
6 7739 bp 63.99 9.67 92.49
OR_07232018_dam_0_1um_scaffold_365
Genus: Thiomonas (84.85%)
33 35890 bp 65.27 8.32 92.54
OR_07232018_dam_0_1um_scaffold_361
Genus: Thiomonas (77.78%)
18 19096 bp 64.11 8.05 92.58
OR_07232018_dam_0_1um_scaffold_344
Genus: Thiomonas (95.45%)
22 19714 bp 65.60 8.15 92.58
OR_07232018_dam_0_1um_scaffold_8438
Genus: Thiomonas (100%)
3 1866 bp 63.56 6.59 92.60
OR_07232018_dam_0_1um_scaffold_2841
Species: Thiomonas arsenitoxydans (60%)
5 3926 bp 67.80 8.86 92.61
OR_07232018_dam_0_1um_scaffold_312
Genus: Thiomonas (63.64%)
22 27197 bp 63.32 8.04 92.73
OR_07232018_dam_0_1um_scaffold_15220
Species: Thiomonas intermedia (50%)
2 1258 bp 64.94 6.08 92.77
OR_07232018_dam_0_1um_scaffold_1001
Species: Thiomonas arsenitoxydans (55.56%)
9 8429 bp 67.84 7.01 92.86
OR_07232018_dam_0_1um_scaffold_443
Genus: Thiomonas (90.63%)
32 34518 bp 66.51 8.36 92.86
OR_07232018_dam_0_1um_scaffold_2444
Species: Thiomonas intermedia (66.67%)
3 4377 bp 67.65 7.51 92.87
OR_07232018_dam_0_1um_scaffold_90
Genus: Thiomonas (91.78%)
73 68324 bp 65.54 8.99 92.92
OR_07232018_dam_0_1um_scaffold_11723
Species: Thiomonas arsenitoxydans (100%)
1 1501 bp 62.16 7.20 92.94
OR_07232018_dam_0_1um_scaffold_360
Genus: Thiomonas (90.91%)
22 19149 bp 65.06 7.86 92.94
OR_07232018_dam_0_1um_scaffold_307
Genus: Thiomonas (90.91%)
22 21948 bp 63.91 8.37 93.05
OR_07232018_dam_0_1um_scaffold_1932
Species: Thiomonas intermedia (55.56%)
9 7857 bp 68.03 6.85 93.05
OR_07232018_dam_0_1um_scaffold_811
Species: Thiomonas intermedia (60%)
10 10108 bp 65.89 7.57 93.07
OR_07232018_dam_0_1um_scaffold_1427
Genus: Thiomonas (100%)
9 9168 bp 64.20 8.41 93.19
OR_07232018_dam_0_1um_scaffold_5335
Species: Thiomonas sp. CB2 (66.67%)
3 2539 bp 67.70 9.04 93.23
OR_07232018_dam_0_1um_scaffold_356
Genus: Thiomonas (77.78%)
27 26453 bp 65.13 8.39 93.23
OR_07232018_dam_0_1um_scaffold_469
Species: Thiomonas intermedia (55.56%)
18 17568 bp 65.88 8.37 93.29
OR_07232018_dam_0_1um_scaffold_687
Species: Thiomonas arsenitoxydans (50%)
12 11543 bp 62.05 9.25 93.30
OR_07232018_dam_0_1um_scaffold_217
Genus: Thiomonas (97.87%)
47 49464 bp 63.21 9.29 93.31
OR_07232018_dam_0_1um_scaffold_890
Genus: Thiomonas (92.31%)
13 9214 bp 64.22 7.91 93.35
OR_07232018_dam_0_1um_scaffold_386
Genus: Thiomonas (93.33%)
15 18442 bp 64.84 8.69 93.36
OR_07232018_dam_0_1um_scaffold_619
Genus: Thiomonas (68.18%)
22 15308 bp 63.97 8.77 93.36
OR_07232018_dam_0_1um_scaffold_792
Genus: Thiomonas (100%)
14 11394 bp 66.34 7.33 93.36
OR_07232018_dam_0_1um_scaffold_700
Genus: Thiomonas (51.85%)
27 28986 bp 65.27 7.67 93.39
Displaying items 101-150 of 226 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.