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FFSP_062018_mid_0_1um_Hydrogenophilales_62_23

FFSP_062018_mid_0_1um_RIFOXYD1_FULL_Hydrogenophilales_62_11_curated_62_23
In projects: FFSP_062018_mid_0_1um  |  SOB_across_mines

Consensus taxonomy: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated  →  Hydrogenophilales  →  Betaproteobacteria  →  Proteobacteria  →  Bacteria

Description

(J)

Displaying items 101-150 of 800 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
FFSP_062018_mid_0_1um_scaffold_1855
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (75%)
4 5960 bp 61.51 25.75 95.13
FFSP_062018_mid_0_1um_scaffold_2971
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (100%)
4 3966 bp 62.48 25.72 92.59
FFSP_062018_mid_0_1um_scaffold_9931
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (100%)
2 1353 bp 67.04 25.72 90.91
FFSP_062018_mid_0_1um_scaffold_5814
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (100%)
4 2146 bp 58.34 25.72 88.77
FFSP_062018_mid_0_1um_scaffold_3049
Order: Hydrogenophilales (100%)
3 3881 bp 65.76 25.70 94.61
FFSP_062018_mid_0_1um_scaffold_5654
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (75%)
4 2201 bp 60.11 25.69 90.91
FFSP_062018_mid_0_1um_scaffold_750
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (100%)
13 11052 bp 62.82 25.69 91.31
FFSP_062018_mid_0_1um_scaffold_1656
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (83.33%)
6 6486 bp 61.41 25.65 92.14
FFSP_062018_mid_0_1um_scaffold_2884
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (50%)
6 4064 bp 64.15 25.65 95.30
FFSP_062018_mid_0_1um_scaffold_4070
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (66.67%)
3 2995 bp 64.44 25.64 100.37
FFSP_062018_mid_0_1um_scaffold_1944
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (83.33%)
6 5738 bp 61.35 25.62 92.23
FFSP_062018_mid_0_1um_scaffold_1893
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (71.43%)
7 5862 bp 65.54 25.61 94.63
FFSP_062018_mid_0_1um_scaffold_2233
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (100%)
4 5090 bp 63.97 25.61 97.49
FFSP_062018_mid_0_1um_scaffold_1088
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (88.89%)
9 8668 bp 62.06 25.61 95.28
FFSP_062018_mid_0_1um_scaffold_2398
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (66.67%)
3 4793 bp 69.33 25.60 100.15
FFSP_062018_mid_0_1um_scaffold_5189
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (100%)
3 2390 bp 62.59 25.54 95.90
FFSP_062018_mid_0_1um_scaffold_6040
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (100%)
2 2073 bp 63.19 25.47 92.91
FFSP_062018_mid_0_1um_scaffold_1808
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (85.71%)
7 6072 bp 62.45 25.47 91.01
FFSP_062018_mid_0_1um_scaffold_10142
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (50%)
2 1331 bp 63.11 25.47 101.88
FFSP_062018_mid_0_1um_scaffold_1099
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (72.73%)
11 8619 bp 61.74 25.46 92.17
FFSP_062018_mid_0_1um_scaffold_857
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (83.33%)
12 10098 bp 61.10 25.46 94.83
FFSP_062018_mid_0_1um_scaffold_5748
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (80%)
5 2170 bp 60.92 25.44 87.10
FFSP_062018_mid_0_1um_scaffold_6892
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (80%)
5 1840 bp 64.57 25.43 96.68
FFSP_062018_mid_0_1um_scaffold_10984
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (100%)
1 1245 bp 63.29 25.42 95.90
FFSP_062018_mid_0_1um_scaffold_11045
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (100%)
2 1239 bp 65.54 25.42 99.52
FFSP_062018_mid_0_1um_scaffold_2808
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (75%)
8 4179 bp 48.48 25.41 87.87
FFSP_062018_mid_0_1um_scaffold_6462
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (100%)
3 1949 bp 60.13 25.40 94.82
FFSP_062018_mid_0_1um_scaffold_2080
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (85.71%)
14 5418 bp 49.59 25.39 95.13
FFSP_062018_mid_0_1um_scaffold_2529
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (50%)
4 4562 bp 62.21 25.38 89.17
FFSP_062018_mid_0_1um_scaffold_3286
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (100%)
3 3625 bp 62.21 25.37 98.07
FFSP_062018_mid_0_1um_scaffold_1283
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (88.89%)
9 7815 bp 60.96 25.37 91.36
FFSP_062018_mid_0_1um_scaffold_443
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (84.62%)
13 14949 bp 60.43 25.35 92.07
FFSP_062018_mid_0_1um_scaffold_5296
Species: RIFOXYA1_FULL_Hydrogenophilales_63_33_curated (50%)
6 2337 bp 58.88 25.35 77.92
FFSP_062018_mid_0_1um_scaffold_2215
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (83.33%)
6 5125 bp 62.69 25.32 93.19
FFSP_062018_mid_0_1um_scaffold_7666
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (100%)
3 1677 bp 64.28 25.31 88.19
FFSP_062018_mid_0_1um_scaffold_5277
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (66.67%)
3 2347 bp 64.12 25.31 99.06
FFSP_062018_mid_0_1um_scaffold_3913
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (80%)
5 3107 bp 59.38 25.30 90.96
FFSP_062018_mid_0_1um_scaffold_6309
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (100%)
4 1994 bp 61.94 25.28 96.44
FFSP_062018_mid_0_1um_scaffold_9062
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (100%)
2 1460 bp 53.97 25.27 94.93
FFSP_062018_mid_0_1um_scaffold_12350
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (100%)
2 1129 bp 62.62 25.24 98.32
FFSP_062018_mid_0_1um_scaffold_7523
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (100%)
2 1706 bp 59.09 25.23 81.24
FFSP_062018_mid_0_1um_scaffold_5080
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (66.67%)
3 2439 bp 67.69 25.22 99.51
FFSP_062018_mid_0_1um_scaffold_2920
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (100%)
4 4015 bp 59.85 25.22 97.21
FFSP_062018_mid_0_1um_scaffold_1945
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (83.33%)
6 5736 bp 57.83 25.21 96.39
FFSP_062018_mid_0_1um_scaffold_2612
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (50%)
8 4427 bp 62.53 25.21 93.79
FFSP_062018_mid_0_1um_scaffold_2106
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (66.67%)
3 5343 bp 66.63 25.21 97.64
FFSP_062018_mid_0_1um_scaffold_1372
Order: Hydrogenophilales (90%)
10 7452 bp 63.58 25.20 92.95
FFSP_062018_mid_0_1um_scaffold_3977
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (100%)
4 3060 bp 63.46 25.20 89.41
FFSP_062018_mid_0_1um_scaffold_9112
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (100%)
2 1453 bp 63.73 25.19 100.76
FFSP_062018_mid_0_1um_scaffold_2262
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (80%)
10 5013 bp 54.64 25.19 96.71
Displaying items 101-150 of 800 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.